LOC110531545


Basic Information

Item Value
gene id LOC110531545
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14070035 ~ 14088275 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989212.1
CAGCTGTGACATCGACACAAAGACACTTGTTGAGAGCATCTCCTCCGGCTCACCTTGCAGTCACGCTAAGGACAACTTGTTCAAGGAGAACCACGACGCTATTTTCCTCCAAGAAACCTTCAAGTCACGAAATTACAGGAATGGACAATAGCAGCAGACTGATGTTCGCAGTCGTCATGGTAATGGCATACATGGTGATGGGAGCCCAGACCCAGAACTCCACAGCGGCCCCGAACGTCACTATGGCAGCTAATGTTACTGCTACAGGACCCAACATAACAACGAACCTTAGCACAACACATTCCCCGGGCGTAAACATCACAATCAATGGTACCATGGCACCCAACACAACAATGTCTCCGACGGCTGTGGTACATGTTGTCAACACTACCGTCACAGCTCTCACGGTAAACATCTCAATGAAAGAATGTGGAAAGACTCAGCTCTGTGCTGCTCAGCCGGAAAACTGTGATCCGGCCGTGGCTGGTTCCTGTTTCTTCGTCTCCACCCAGCAGTCCTCGGGACAGACTTTCTCCTTCCAGCTACGAGGAGTGTCCAGTGGCTACATCGCTGTGGGCTTGTCCACAAACTCCACACTGgATGGTAACGCCACCATCTATGTGTGCGCCAACAACAACGGCAACGTGAATTTCTTCACCGCTCTCCTCGACAAAGGAAATCTGACCAACAACACACTGCATGTGGACTCTGTGAAGGGCTCAGTCAACGGTCAGACCATCCAGTGCACCTTCTCTGCTACTGTCCCCAAAGTTACGTCCACCCGGAGCATCGACACCAGCTTCTACCTCTCCATCTTCAATGGATCCTTTATTAAAGGAATACTGGGTCATCCAAATGTTGTCCTGCTCAGTAATAAAGCAGTGGACCTGTCCAACCCCCAAAATGCTGTGATCAACTCTTTGAACAACATCATCCCCACTACTGCTgctccctccaccacctccagcCACGCCTTTGGCCTGCAGCACACCCTGTCTCAAGCTCTTCTGATCCTGCTAGGTGTACTAGGTATGATGATGCTGTAATGCAGGTCTGAATGTGAAGCACCATGCACTCAGGAATTCTG
>XM_021614759.2
CAGCTGTGACATCGACACAAAGACACTTGTTGAGAGCATCTCCTCCGGCTCACCTTGCAGTCACGCTAAGGACAACTTGTTCAAGGAGAACCACGACGCTATTTTCCTCCAAGAAACCTTCAAGTCACGAAATTACAGGAATGGACAATAGCAGCAGACTGATGTTCGCAGTCGTCATGGTAATGGCATACATGGTGATGGGAGCCCAGACCCAGAACTCCACAGCGGCCCCGAACGTCACTATGGCAGCTAATGTTACTGCTACAGGACCCAACATAACAACGAACCTTAGCACAACACATTCCCCGGGCGTAAACATCACAATCAATGGTACCATGGCACCCAACACAACAATGTCTCCGACGGCTGTGGTACATGTTGTCAACACTACCGTCACAGCTCTCACGGTAAACATCTCAATGAAAGAATGTGGAAAGACTCAGCTCTGTGCTGCTCAGCCGGAAAACTGTGATCCGGCCGTGGCTGGTTCCTGTTTCTTCGTCTCCACCCAGCAGTCCTCGGGACAGACTTTCTCCTTCCAGCTACGAGGAGTGTCCAGTGGCTACATCGCTGTGGGCTTGTCCACAAACTCCACACTGgATGGTAACGCCACCATCTATGTGTGCGCCAACAACAACGGCAACGTGAATTTCTTCACCGCTCTCCTCGACAAAGGAAATCTGACCAACAACACACTGCATGTGGACTCTGTGAAGGGCTCAGTCAACGGTCAGACCATCCAGTGCACCTTCTCTGCTACTGTCCCCAAAGTTACGTCCACCCGGAGCATCGACACCAGCTTCTACCTCTCCATCTTCAATGGATCCTTTATTAAAGGAATACTGGGTCATCCAAATGTTGTCCTGCTCAGTAATAAAGCAGTGGACCTGTCCAACCCCCAAAATGCTGTGATCAACTCTTTGAACAACATCATCCCCACTACTGCTgctccctccaccacctccagcCACGCCTTTGGCCTGCAGCACACCCTGTCTCAAGCTCTTCTGATCCTGCTTGGTGTACTAGGTATGATGATGCTGTAATGCAGGTCTGAAGGTGAATCACCATGCACTCAGGAatcctgtctccttccctttctcaccTTGGCCAGGCTGCatccctaaatggcaccctattccctaaatactACTGTAccttcactatgtagggaataggttgcaatTCTGGACTCAATCTGGTAACAGAACAAAGGACCATCTGAAGTTATATGCAATCATGTTTTTCCACATACTCAATAAAACACCTAGTTGTGGGTAGTAAGACATTAACCAACAGAATGAACCCAGTGATACAAGGCCAAGTACTAACATATTGTGTTGATAGACAATACCGTTCATTCAAATTCATTAATTATCTCCAGCAACATTCCCAACATCAACACTTAACGTCTATCTTGttgactacaaaacatagaagcCGCCATTTTAATATATGTTGATGTTGGAGTTTTGCTGGAGATGAAGATGAACTGTCCCTGATGAAGATGAAATAACTGGGTGTAGAAACAGATCCTCCATATTTGTACTGTATACCCCCATATCATCCCCTACATGTAACTAATTTATTTGTGACAGAGGAAGTCGTTTTATAATTCTGTATTTGCTGATGTCCTGTTATGAAGGAAGACTTACGTTTGTCTGTGTTTCTTAGtggatgtgtgtgagagtgactttgtgtaaatatttgtgtaGTGATGAGagtccacacacatacccacgcTTGGGACAaatgtcaattcaacatctactgCATTCCACATCGGTTCAAAGTAATTTCATTGCAATAACATTGAAACATTGCTTAAACCAGGGTTTGCCCAGTGGGCCGTAGATTAAGTCATAAaggctgcatttagacaggcagaCAAGTTTATACTTGTTCCAATATTTGGTCTTATGAACAATAACATCAgctatttttcagagctgatcaaaataccaatttgtgtgtgtgtgtacactatgaAGCCACTGGATGGTGAACTGTTCTACCTGACTACCCTTTTAAATTAAATATTTGCAATAGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989212.1 False 1087 mRNA 0.51 7 14070035 14088275
XM_021614759.2 True 2051 mRNA 0.45 7 14083846 14088275

Neighbor

gene id symbol gene type direction distance location
LOC110532929 LOC106578030 coding downstream 25522 14042284 ~ 14044513 (-)
LOC110531540 LOC106594400 coding downstream 30306 14033558 ~ 14039729 (-)
LOC110532928 NA coding downstream 39251 14028919 ~ 14030784 (-)
LOC110531549 NA coding downstream 44710 14022650 ~ 14025846 (-)
LOC110531539 NA coding downstream 67975 13988898 ~ 14002060 (-)
ndrg2 LOC106577998 coding upstream 66074 14154349 ~ 14191312 (-)
LOC110531544 LOC106577997 coding upstream 125171 14213446 ~ 14223844 (-)
si:ch211-63p21.2 LOC106578003 coding upstream 137510 14225785 ~ 14231094 (-)
LOC118966145 LOC106599223 coding upstream 161259 14249401 ~ 14254157 (-)
LOC110532998 NA coding upstream 167204 14255479 ~ 14259219 (-)
LOC110531536 NA non-coding downstream 126313 13917998 ~ 13943754 (-)
G774181 NA non-coding upstream 26010 14114285 ~ 14123191 (-)
LOC110531554 LOC106578008 non-coding upstream 223185 14311455 ~ 14405052 (-)
G774281 NA non-coding upstream 248244 14336519 ~ 14336804 (-)
G774285 NA non-coding upstream 251985 14340260 ~ 14340725 (-)
G774294 NA non-coding upstream 272680 14360955 ~ 14361175 (-)
LOC110531538 NA other downstream 82453 13977459 ~ 13987582 (-)
G773168 NA other downstream 370707 13697179 ~ 13699328 (-)
G773163 NA other downstream 477947 13586326 ~ 13666937 (-)
G772877 LOC106577934 other downstream 1073625 12994269 ~ 12996410 (-)
G771614 NA other downstream 2098681 11970904 ~ 11971354 (-)
G774427 LOC106578022 other upstream 635779 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 1149783 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 1264032 15352307 ~ 15361319 (-)
G774954 NA other upstream 1536927 15625202 ~ 15625920 (-)

Expression


Co-expression Network