ndrg2 (LOC106577998)


Basic Information

Item Value
gene id ndrg2
gene name LOC106577998
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14154349 ~ 14191312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989203.1
AGAGGGGGGGGAGCCGAGAGTTAGACGAAGAGCTTTTGCCAATATCACATCGCCATTTAGTCGTTAGATAACCATTGTAGTTGTCAGTTTAGGATAGTTTTGCAATTTGAACGCTTTTATTAAATATATGCGAAATATTGACCTCCTAACGGATACTTTACATAAAAGCATAGTTGTCCCTCCCCTAAATCGTAGTAAAGTAACGTTATCCGTGTCTCTTGATTGACGGGTCCATATTTCTTTTCCTGAAAGAAcggtaaaaaaacatttttttaaaaataaagcCCTGTGAAACTGAAGAACGGTCAGCGAAAAATAACGGAGGTGGAAGAAATTGAAATATCAAGAAAGATTGTTGGGCGCATCCGAGGGACAAGTGTGAAAACAAGAAATCACTGAAAAAGAGACAAGAGTTGTGTCATTTGCATATTTCTTTAGACGTCCTTATTTTGTCAGAATTAGTTTGTTGACTTAGGGGCTTGAACAAGTGACGCCATGACGACGGAGATGCAGGAGATCGCCATCACAGAGGAAAAACCTTTACTTCCTGGTCAGCCCGATCCTACAAAGGATGTTGAGGCTGCAGCTCGGATACTGTTGGACCAGGGCCAGgaaCACAGTATTGAGACTCCACATGGTCTCCTCCACGTGACTCTCCATGGAACCTCCAACACACGCCGTCCTGCCATCCTGACCTTCCATGACGTGGGCCTGGACAgtaaAAGctgcttctctcctctgtttaaGTTTGAGGAGATGCAAGAGATAGTGAAGAACTTTACCCTGGTCCACATCGATGCTCCAGGCCAAGAGGAGGGGGCTACCGCCTATcctatgggATACCAATATCCGTCCATGGAGCAAATTGCAGAGATGATCCCTGCTGTCCTGACATATTTCAATTTCCGTACTGTCATCGGAATTGGAGTGGGATCTGGTTCTTACATTCTCTCCAGGTTCACAatGACCCATCCAGACTCAGTTGAAGGtctggttctcatcaacatggATCCTGAGACCAGAGGGTGGATGGACTGGGCGGCCCAGAAGatCACTACCCTGACCTCCTCCATCACAGAGCAGATCCTGAGTCATCTCTtcagccagGAGGAGATGTCAGCAAATGCAGACCTGGTGAGGTCACACAGAGATCGCATCTCTAAAGCCCCCAACCTCATCAACATTGAGCTGTTCTGGAGAAGCTACAACAGCCGCAGGGATCTGATCATTGACCGTAACAGCAACTTCAAgtgTCCCGTGATGCTGGTGGTTGGGGATCAGGCACCTCATGAGGAGGCTGCTGTGGAGTGCAACAGCAAACTGGACCCAACAACAACCTCATTCCTCAAGatgGCCGATGCTGGTGGTCTTCCCCAACTCACCCAGCCCAGCAAACTGACTGAGGCGTTCAAGTACTTCATCCAGGGGATGGGCTACAtGGCATCGTCCATTATGACGCGTCTGTCTCGTTCGCGCACCGCCTCACTGTCTTCCTCCTACTCCATGGACGGGGAGCGTCAGCGTTCTCGtaccctgtctcagagctctcaGGGCGGGCAGATGCCCCCCAGCCCCTCCCATACCATGGAGGTGTCctgctgaagagagagagagagagagagggggagagagagagatggatggagagctaGAGGGATGGAGAGCTAGATGCATGGGTGGTGGGTGAGAGTGGGACGATAGCATTTGTCACTAACCCACTCCCACATCTCTTAAACCTGTCATTCCCCCAGACCAGctaacagaaagagacagagagacagagggagagatatgcAAAAGTAGATATAGTAAAAGTAGACGGACAGAGGGAAAATGTAAGACCGTTAATAAAACACTGTCCTCCCACAATTCATCTCATTCTAAAACTGTCCTCCCACAATTCATCTCATTCTAAAACTGTCCTCTCACAATTCATCTCAACCTCACCTATTCATCtctttagagagaaagagagagagagagagattttcaccTAGACAGCGAAGGATAGAGGGAATGGATAAATGAAAATAGGGAAAGGAAGAAAGGGAGAATTTAGGAACAAGGGAATATAGAAAAAGGGTAGCAAGGAAAGGGCATTTTAGGGGTGTCGGccagtcctctctccctccctctatcggAAAGTCTGTTAGCCTATAGAGCCCTTTAACCTATGGAGTGggaagggtctgtagtgacctcACCGTAGTGTTAACTAATAGTAATAATTATGATAATGAGAAATATGACTATGATATTAATGCTATTAATAATTATACTGACAATGATGTAATAGTAACGTTATAACAATTATTCTCTTTAattttaaagtttgaaatattatGAAATAGAAGAAAAGACTTTAGCAGAAATACTTATAATGAAAATGTGTTTGTGTCAACTCCTTTAATTAATcaatttttaatgtttttttgtattgttgctttttGTAACCTGCCTCAGTGAAGGGGTGAGGCTTCTCATTGGCCATGTGAACCTTAACCATAGCAACAGCCAATGAAAGTCTACTTCCGCCTCTCTGTTGCCGGGTAGATCATGTCTTCCATTAGCCCTGTTCAAGTGACACATTTTTGTTCCCATGAGGGGATTGGGGTGGGCGGGTAAGGGGGGTGTGGTTGTTTGACTGTGTGGAGCATCTGCATGCCTGATCTGATTTCAGCCAATGTGAATATAGACGGAATGTTTCCTTTTCTTTTGTATGCAAATATgggtttgttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgcacatgtgtgtttgtTATTAAGCTTTTGGGCAAAGATTAGCAGATGACGATGATGAGGATGGATGAAGAAGAGTGACATTATTAGTGAGTTAAGTCCTACACTAGTAAATCAGTAACAAGTGCTTCCAATGCTGCTGGCAGTCCCAGACTCGACCAGCAGGGGTCACTGTGTTTGTCCAATAGTCTTTATGACGACATACATGCATGTACCTGCATGCTATGGAGTGAAGTTTCCCTCTAGCTACAGATCTAGGATACGCTTCCCCTCcaccaatcctaaccttaaccattagtgaaGAAAATGCTGAACTGACCCAAGATCATCATCTGTGGGACAACTTCCCCCTATTCCAGCCTGCATATACCTCACTACTAACATACTTTAGTCTTCATCAAAGAGATAAAATAGCAAATTCCTTGTTGAACAAGCACACTGTACATGTTGTGTGATAGCTAGATGTAGGCATTGCATTGCCCTATAGTGATGCACTCACCGATCATGACTGACAGCTCAGAGCACCAATACCAAGTCTATGACTTTGACTGACAGAGCAGCGAACCAATACCATGTCTGTCTGCTTGACTGTCAGCTGAGAGAACCAATAGCATGTCTCTCTGAAGTCAGGAGGTATGTGGAGTGGACAGTACTGGACTAGAGTATAGAGGTATCCGTATAGAGTAGGGAGTGTGAAATAAGGCATTATTGTGTGGTTCTTTGTGTGTTCCAGGGTGTTTGTGCGCGTTTGTGACTGTGTTTATGTgccgtgcaagtgtgtgtgcatttgaAAGCTCTCATACCTTCTAAGCACAATTTAAGAGACAAGATGAGGAAAGGATAGAACCCATCCCCTCCCATTGGACCTTATAAATCAACAATGAACCAGCCCCTACACTGCCAACTCcctaaccctacaccctaacccttacgctacaccctaaccctagaccTAGAAGATGACTGTCCACACTCATCAAGTCATACTATAGGAACCCTTCTCTGTATGGATCTCAGAACAGTAAAGTCAAAGCTAAAAACAGTTTTATAGGATTGTTTTATAGGATTGTAATACACTTTCAGTGAAAACTGAATGTTAAATTGTCAATGTGATCTGCATATAGTAAAAGGTCATAGACTAAAGGTACATCCATGTGAAGCTTAACACTGCCCTGATCCTAACCAATGGACTGAACACACTGTTATTTGACCCAATTACAGAAAACACTTGGAGAGCTGTGTGTATGTTTtcgagtgtgtgaatgtgtgtgtgtgcgtgcaatgtgtgtgtttgatttccGTAGTTCCGTGCAATCATTAATATGGCTTATATAACGTTTTAAAAGTATTACTTTCAATTTGAGAAACCTGTTTGCTCGTTTCTTTCCGGTTCTCTTCAGAGTTCCGCCCCTTCCTCTCTTTTTATAGTAGTCTGGTTGGATGGTTGTTGATGGAGATACTGAGGATAGGTCGGTTAAGGGTAttttgatgatggtgatgatgatgatgatgttccTAGATAATAATTGGAACATTATTTTAATGATATTTAGGCTCCTCCTAGTCTTGCATTGAGAATCAACCAATCTGGAATGGGAGCCTCGACTAACAAAGGGGAAATGGGTGGAGCCTAATAGTTTACcaataaagggaaaggggggggcTTACTGTTTGAGTTGAGTGGGCTGGGCTGTGTGAATGTACGCTTGTCCATTTCTTCTTTTAATTTTTACCCTCATTTTTTCCTTCAATCATACTCTtttattttcctattttgttgttgACCATTTAGTTTTATTAAGTGAAGTGTTAGTTTACCGCCTCAGTGTGCTCACAAGTTAGACAAGCGTGTTCGTTCTTGTGTAACTTTTTTTAGCAACAGCACTAAACAAATGGGAGAATAATATAAATGATTTTAAAACAAACAGAACACAATCAAATTTACTTGTGTGGCTAATTTGTCTGTGTAATAAAATAAACAACCTAAAACATTAATGAGTAGTAATAAAAGACAAGAAGAAATCTTGA

Function

NR:

description
protein NDRG2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989203.1 True 4791 mRNA 0.43 16 14154349 14191312

Neighbor

gene id symbol gene type direction distance location
LOC110531545 NA coding downstream 66074 14070035 ~ 14088275 (-)
LOC110532929 LOC106578030 coding downstream 109836 14042284 ~ 14044513 (-)
LOC110531540 LOC106594400 coding downstream 114620 14033558 ~ 14039729 (-)
LOC110532928 NA coding downstream 123565 14028919 ~ 14030784 (-)
LOC110531549 NA coding downstream 129024 14022650 ~ 14025846 (-)
LOC110531544 LOC106577997 coding upstream 22134 14213446 ~ 14223844 (-)
si:ch211-63p21.2 LOC106578003 coding upstream 34473 14225785 ~ 14231094 (-)
LOC118966145 LOC106599223 coding upstream 58222 14249401 ~ 14254157 (-)
LOC110532998 NA coding upstream 64167 14255479 ~ 14259219 (-)
si:ch211-63p21.8 LOC106577827 coding upstream 91493 14282805 ~ 14287169 (-)
G774181 NA non-coding downstream 31158 14114285 ~ 14123191 (-)
G774159 NA non-coding downstream 51533 14075965 ~ 14102816 (-)
G774158 NA non-coding downstream 79752 14074355 ~ 14074597 (-)
LOC110531539 NA non-coding downstream 152331 13988898 ~ 14002060 (-)
LOC110531554 LOC106578008 non-coding upstream 120148 14311455 ~ 14405052 (-)
G774281 NA non-coding upstream 145207 14336519 ~ 14336804 (-)
G774285 NA non-coding upstream 148948 14340260 ~ 14340725 (-)
G774294 NA non-coding upstream 169643 14360955 ~ 14361175 (-)
G774246 NA non-coding upstream 180034 14371346 ~ 14371628 (-)
LOC110531538 NA other downstream 166767 13977459 ~ 13987582 (-)
G773168 NA other downstream 455021 13697179 ~ 13699328 (-)
G773163 NA other downstream 562261 13586326 ~ 13666937 (-)
G772877 LOC106577934 other downstream 1157939 12994269 ~ 12996410 (-)
G771614 NA other downstream 2182995 11970904 ~ 11971354 (-)
G774427 LOC106578022 other upstream 532742 14724054 ~ 14724522 (-)
G774562 LOC106577809 other upstream 1046746 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 1160995 15352307 ~ 15361319 (-)
G774954 NA other upstream 1433890 15625202 ~ 15625920 (-)

Expression


Co-expression Network