XLOC_026610 (myh11b)


Basic Information

Item Value
gene id XLOC_026610
gene name myh11b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36667802 ~ 36711708 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051840
TGGTGGCTGGAGCAAAAGACAAAATGCGAGGCTCGActtgaggaagaggaggagcgcAGTCAGGCTTTTCAGCAAGAaGTCCGTGAGCTTGAGGCTGAGCTAGAAGATGAGCAGAAGCAATGTACCTCTAGAGAGAGACAAATAATCACTTTTGAAAATCGTGTTTGGAGACAACTCTCCAACTATATTGAGaaattctGCACCCAAACAAGTCCAGTCACCAGAAACATCAGCCCCACCGAAAGGAAGATTGGTCCTACT
>TCONS_00051841
ATGTTGAAGAAGTTGATAGAAGATGAAGGCCGAAGCCATGAGGCTCAAGTGCATGAGCTGAAACAAAAACATGCTCAGGCTGTAGATGAACTTAGTCAGCAGCTAGACCAATCTAAACGGGCCAAAGCCACTCTGGAGAAGGCTAAACAAGCCCTTGAGAAGGAGGTTGGAGACCTAAATGGAAACCTTCGCTCACTGGGTAATGCCAAGCAGGATTTggagcagaagaagaagaaggtaGAGACCCAGCTTGCTGACCTTCAGACTCGTTTcaatgagagcgagagaaaaaggGAGGAGCTTGGAGATGCAGTGTCCAAACTTAATACAGAGTATAACAATGTGAACAGCATCCTCAATGAGGCAGAGAGCAAGAACATCAAGCTGAGTAAAGACGTTGTCAGCCTTAACTCACAGCTCCAAGATGCACAGGAGCTACTTGCTGAGGAGACACGTCAAAAACTTAACTTTTCCACTAGACTGCGTCAAATGGAGGATGAACGAAATGGTCTTCTGGAACAAATAGATGAAGAGACAGAAGCCAGAAGGAATGTGGAGAGACATGTCTCTAGTCTTAACACACAAGTCAGTCTCTCACATTTGAAACTAAGCGAGACAACTCCACTCAGAATTTCAATTTCTCCTCATCCTGGAATCCCTGAAATATCAGAGAATTAA
>TCONS_00051842
ATGACCATGCAGGACAACGATGACAGCAACAAGTTCCTTTTCCTGGACAGTGAGTTCAAAAACAGTGGGGTGGCTCAGGCTGACTGGTCCACCAGAAAGATGGTGTGGATTCCCTCAGAAAGGGATGGTTTTCAGTCAGCCAGCATTAAAGAAGAGACGGGGAATGAGGTGGTGGTGGAGCTGGACAACGGGCAGAAGGTGACCGTCAGCAAAGACGACATTCAGAAGATGAACCCACCCAAATTCAACAAGGTTGAAGACATGGCTGCTCTGACCTGCCTGAACGAGGCTTCAGTGCTGCACAACCTCAGGGAGAGGTACTTCTCAGGCCTTATTTATACATATTCAGGCCTCTTCTGTGTGGTGATCAACCCTTATAAGATGCTGCCCATCTACTCTGAGAAGATCATTGAGATGTACAAGGGGAAGAAGCGTCATGAGGTTCCTCCACACATCTACTCTGTCACTGATAATGCCTACAGGAACATGCTGCAAGGCAAAACTGAAAATACCAAAAAAGTCATCCAGTACCTGGCGGTTGTGGCATCATCACATAAAGGAAAGAAAGAGGCCACTTCTGGAGAGCTTGAGAAGCAGCTCCTGCAGGCCAATCCCATTCTGGAGGCATTTGGAAATGCAAAGACCATCAAAAATGATAATTCTTCAAGATTTGGTAAATTTATCAAAATCAACTTTGACAACACCGGCTACATCGTTGGAGCAAACATTGAAACGTACCTCCTGGAAAAGTCTCGCTGTATCCGACAGGCCAAAATCGAGAGATCCTTCCACATCTTCTACTATATGGTGGCTGGAGCAAAAGACAAAATGCGAGAGGAGCTCTTGCTAGAGGACTTTGCTAACTACCGTTTCCTGGTGGCTGGACATGTCCAGGTTCAAAACCAGCAAGATGACGAGATGTTAGAGGAGACTCTTGAGGCCATGGAGGTTCTGGGCTTCAACGAGGAAGAACGAATAGgcATGTTTAAAATCTGTTCTACTGTGCTGCAACTGGGCAATATTGagttcaaagcagaaaaaaacCAAGAGCAGGCCAGTATGCCAGACAACACAGCTGCACAGAAAGTGTGCCATCTGCAGGGGATTAATGTGACTGACTTTACCAAAGCCATGCTCACTCCTAAAATCAAAGTGGGCCGAGAGCTGGTGCAGAAGGCACAGACCAAAGAACAGGCTGACTTTGCAGTGGAAGCCTTGGCTAAGGCCATGTATGACCGTCTGTTTCGCTGGATCTTGGGCCGTGTCAACAAGGCTCTCGATAAAACAAAGCGTCAGGGAGCCTCTTTTATAGGCATCCTAGACATTGCAGGTTTTGAGATTTTTGAGGATAACTCATTCGAGCAGCTGTGCATCAACTACACCAACGAGAAACTGCAACAGCTCTTCAATCACACCATGTTCATCCTGGAGCAGGAGGAGTACAAGAAGGAAGGCATCGAGTGGAGCTTCATTGACTTTGGTCTGGACCTGCAGCCCTGCATTGAGCTCATCGAGAGACCAAACAACCCTCCAGGTATTCTTGCTCTGCTTGATGAGGAGTGCTGGTTTCCGAAGGCAACTGATGTTTCTTTTGTTGAGAAACTCACAAACACTCACTCAAGCCACTGCAAATTCTCCAAACCCAAGAATCTGAAGGAGAAGACTTTCTTCACTGTGCAACACTATGCCGGCAAGGTGGACTATAATGCCATGTCATGGTTGACTAAAAACATGGACCCACTCAACGACAACGTCACAGCATTGCTGAGCAACTCATCCAGTGCTTTTATTCAGGACATCTGGAAAGATGTGGACCGTGTGGTGGGTTTGGAAACCATGGCTAAGATGGCCAAGTCTGACAGCTCAGCTCCTGCTGCTTCCAAGTCCAAGAAAGGCATGTTCCGCACCGTCGGGCAGCTGTACAAAGAGTCCCTCGGCAAACTCATGACCACTCTTCATAACACTCAACCAAACTTTGTGCGCTGTATCATTCCCAACCACGAAAAAAGGGCTGGCAAGATAGATGCCCATCTTGTTCTAGACCAGCTGAGCTGTAATGGTGTACTAGAAGGGATCCGCATTTGTCGCCAGGGCTTCCCTAATCGTATCGTCTTTCATGAGTTTCGCCAGCGCTATGAGGTTCTTGCTGCCGGTTCCATTCCTAAAGGTTTCATGGATGGAAAACAATCCTGTACGCTTATGATTAAACATCTAGACTTGGACCCAAACCTGTATCGGATTGGTCTGAGCAAGATATTCTTCCGCACAGGAGTGTTGGCACAGCTGGAGGAAGAACGAGACCTGAAACTGACTGATATTATAATAGCCTTCCAGGCCCAGGCCCGTGGTTTTCTTGGCAGAAAGGCATTCAGCAACAAACAAAAGCAGTTGACAGCCATGAAAGTGCTACAGAGgaactgtgctgtttatctgacactcAGGAACTGGCAGTGGTGGAGACTTTTCACTAAAGTCAAACCCCTGCTTCAGGTGACTCGTCAAGAAGAGGAGATGAATCAAATAGAAGAGGAGCTCCAGAAAGCCAAAGAAATTGCCCAGAAGTCTGAAACGGAACTAAAGGAGATCACACAGAAACACGACCAGGTTGTGGAGGAGAGGAATAAGCTGCAGGCGAAGCTCCAGGAGGAAGCAGAACTGTACGCAGAGTCTGAGGAGGTCAGGATACGACTGGAGACCAAGAAGCAAGAACTGGAGGAGGTGCTGCATGAGATGGAGGCTCGActtgaggaagaggaggagcgcAGTCAGGCTTTTCAGCAAGAGAAAGGGAATTTGCAACAAAAACTTAAGGAGTTAGAAAACCATTTGGCAGAACAAGATGCCACCCGACAGAAGCTTCAGTTGGAAAGTGGCGCTGCCGATGGGAAGATTAAGAAACTTGAAGAGGATGTCCTCATCATGGAGGATCAGAAAAACAAGTTGCAAAAGGAGAAGCAACAGCTGGAGGAGCGGTtagctgactttagctccaaccttgCTGAGGAGGAAGAAAAATCTAAAAACCTGACTAAACTAAAGGCTAAACATGAATCTATGATTTCAGATCTTGAAGTTCGAATGAAGAAGGAAGAGAAGAGTCGTCAGGACGTAGAGAAAGCAAAACGTAAACTGGAGACAGAGCATAGTGATTTACAGGAACAAATGAAGAACCTGCAGACCCTGATAGCAGAGCTTAAGACACAGCAAGCCAGAAGTGAAATGGAAATTCAAGAACTTCAAGCAAGCGTGGAAGCAGAATCAACCCAGAAGAGCAATGCTCTGAAAAAGATTCACGAAATGGAAGGACTTCTCTCAGAGCTGCAAGATGAGCTTGAAGCTGAACAGGGGGCTGGTAGGAAGTCAGAAAAGGCCAGAAAGGAGTTGGAAGAAGAGTTGTCAGCCTTGAGGACTGAACTAGAGGACTCATTAGACACCACAGCCGTGCAGCAAGAGCTAAGGGCTAAGAGGGAGCAGGAGGTGGCTATGTTGAAGAAGTTGATAGAAGATGAAGGCCGAAGCCATGAGGCTCAAGTGCATGAGCTGAAACAAAAACATGCTCAGGCTGTAGATGAACTTAGTCAGCAGCTAGACCAATCTAAACGGGCCAAAGCCACTCTGGAGAAGGCTAAACAAGCCCTTGAGAAGGAGGTTGGAGACCTAAATGGAAACCTTCGCTCACTGGGTAATGCCAAGCAGGATTTggagcagaagaagaagaaggtaGAGACCCAGCTTGCTGACCTTCAGACTCGTTTcaatgagagcgagagaaaaaggGAGGAGCTTGGAGATGCAGTGTCCAAACTTAATACAGAGTATAACAATGTGAACAGCATCCTCAATGAGGCAGAGAGCAAGAACATCAAGCTGAGTAAAGACGTTGTCAGCCTTAACTCACAGCTCCAAGATGCACAGGAGCTACTTGCTGAGGAGACACGTCAAAAACTTAACTTTTCCACTAGACTGCGTCAAATGGAGGATGAACGAAATGGTCTTCTGGAACAAATAGATGAAGAGACAGAAGCCAGAAGGAATGTGGAGAGACATGTCTCTAGTCTTAACACACAATTGTCGGAGGCAAAAAAGAGATTGGACGAGTACTCCAGCAATTTCCAAATGCTTGAAGAAAGCAAAAAACGGCTACAGAGGGATCTGGAGGCCACTAAAGGAGAATTAGAAGAGAAAACTGCAAGCTATGACAAGTCAGAGAAGACCAAGAACCATCTTCAGCAAGAGCTGGATGACGTCCTGTTAGACCTAGACAACCAGAGACAGCTGGTTTCAAATATGGAGAAGAAACAAAGGAAATTTGACCAGATGCTTGCGGATGAGAAGACCCTCTCCAGCAAATATTCTCAGGAGCGTGACTGCGCAGAGGCAGAGGCACGGGAGAAGGAGACCAAATGTTTGGCCCTCACTCGAGCGCTGGAGGAATGCCAGGGTTCATTACGTGAGTTAGAGAAACTCAACAAGACACTTCGCACTGACATGGAAGATCTAATCAGTTCAAAAGACAACAAAAATGCCCATGAGCTGGAGAAGACCAAACGTGCACTGGAGGCTCAAGTGGAAGAAATGACAATTCAGATGGAGGAGCTTGAAGATGAATTACAGGCTGCGGAGGATGCTAAGCTCCATTTGGAAGTAAATATGCAGGCCCTCAAAGTCCAAATACAAAGAGACATCCAAGGCAGAGAGGAGCAAAGTGAAGAGAAGAGGAAACAACTCCTCAAGCAGGTCCGTGAGCTTGAGGCTGAGCTAGAAGATGAGCAGAAGATGAGAACGTCCTTGGCTGCTGCCAAAAAGAAACTGGAAGGGGATTTGCAGGACCTTGAAGACCAGGTTGATGTAAACAGCAGAGCGAGGGATGAGGCCGTTAAACAACTCCGAAAGATTCAGACTCAGATGAAAGACTACCAGAGGGAGCTGGAAGATGCTCGAGCATCCCACAAGGAAGTTCTTTCCGATGCTAGAGAATCTGAGCGAAAGGCCAGAGCTATGGAGGCCGAAATCTTACACTTGCATGAGGAACTTGCTTCAGCAGAGAAAGCTCGCAAACATGCTGAAAGAGAGAGGGATGAGATAGCAGGGGAGATGGCAAGTGGTTCCTTCGGAAAATCTGGTACGTCTGATGAGAAACGTCGTCTGGAATCTAAGATCCAACATTTGGAAGAGGAGCTTGATGATGAACAGGCAACCACAGAGACGCTTAATGAGAGACTGCGAAGAAGTGTGCAGGAGGTGGACCAGCTGACCAATGAGCTGCATACTGAACGCTCCAATGCTCAGAGGATGGAGAGTGGCTGGCAGCAGATGGAGAGGCAGAACAAAGAGCTCAGGGCCAAGCTGCTTGAGATGGAGGGACAAGTCAAGTCCAAGCAACGGTCCACTGTAGCTGCCCTAGAGTCGAAGTTACAACAAACAGAAGACCAGCTGGATCATGAAAGCAGAGAGAGACAAGCAATTGCAAAGGCCATGCGCCAGAAAGACAAGAAACTAAAGGAGCTGATGAATCAGGTAGAGGATGAACGGAAACAGATGGAGCAATATAAGGACCAGGCTGAGAAAGCAAATCTTCGAGCAAGGCAGCTGAAGATGCAGATGGAAGAGAGCGATGAAGAATCTCAGCGTGCTACTGCTGCTCGGCGTAAACTTCAGAAAGAGCTGAATGAGGCCATCGAGGCCAACGATGCCCTGAGCAGAGAAGTTTCCTCACTCAGGAGCAAACTCAGGCGTGGCAGTGATTCATCCTTCAGCACACCATTAAGGCGTAGCGCTGGTGGAAGCTTTAGACAAGCACGCAGAACCATGATGGAAACGTCAGAGATCCCAGAAGATGGGGGTCCATCTGCTACATCAGTGTGTCAACCTGGGGAACTTCAGATGGAGTCAATCAGCAACACCCAGGATAACAACTAAGAAAACGGATTTCCTTCTCGCTTCATGTTTTTTCCTATTTCTGTGTAATTTATACTTATTTAATCTTGATCATCTCCTACAAAGGAGGATTGGTACTTATGTTTGTTCTTTATGGGTAAAAACTGACTAATTAAAAAGGGTGTGTATGCAGGGTTGTACAAGCAAGCAAATTTATTACCGAGTACCATGGTGCCTCCATGCATTTTGGGCATGAACATCATAAAATAATGGTTAATTAACTCTTTAGCACTaatgaccttattctgcaatacggaagtgcacttgtttttgcgattgttttagtaTTAAATATTCTatcaattaaatcaattaaaagtctatcaattaaaagtcatcaacagcaataaataatacacaagata
>TCONS_00051843
tctacacagaaataccaactgacccaCAACAAGTTCCTTTTCCTGGACAGTGAGTTCAAAAACAGTGGGGTGGCTCAGGCTGACTGGTCCACCAGAAAGATGGTGTGGATTCCCTCAGAAAGGGATGGTTTTCAGTCAGCCAGCATTAAAGAAGAGACGGGGAATGAGGTGGTGGTGGAGCTGGACAACGGGCAGAAGGTGACCGTCAGCAAAGACGACATTCAGAAGATGAACCCACCCAAATTCAACAAGGTTGAAGACATGGCTGCTCTGACCTGCCTGAACGAGGCTTCAGTGCTGCACAACCTCAGGGAGAGGTACTTCTCAGGCCTTATTTATACATATTCAGGCCTCTTCTGTGTGGTGATCAACCCTTATAAGATGCTGCCCATCTACTCTGAGAAGATCATTGAGATGTACAAGGGGAAGAAGCGTCATGAGGTTCCTCCACACATCTACTCTGTCACTGATAATGCCTACAGGAACATGCTGCAAGAGCGTGAGGACCAGTCTATTCTCTGCACCGGTGAGTCTGGTGCAGGCAAAACTGAAAATACCAAAAAAGTCATCCAGTACCTGGCGGTTGTGGCATCATCACATAAAGGAAAGAAAGAGGCCACTTCTGTGAGTCCGTCTGTTTGA

Function

symbol description
myh11b Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Human ortholog(s) of this gene implicated in patent ductus arteriosus and thoracic aortic aneurysm. Orthologous to human MYH11 (myosin heavy chain 11).

GO:

id name namespace
GO:2000574 regulation of microtubule motor activity biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-101124-2 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Human ortholog(s) of this gene implicated in patent ductus arteriosus and thoracic aortic aneurysm. Orthologous to human MYH11 (myosin heavy chain 11).

Ensembl:

ensembl_id ENSDARG00000100972

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051840 False 261 mRNA 0.47 10 36667802 36701870
TCONS_00051841 False 678 mRNA 0.45 5 36683833 36690348
TCONS_00051842 False 6302 mRNA 0.47 39 36685311 36708503
TCONS_00051843 True 642 mRNA 0.49 5 36703496 36711708

Neighbor

gene id symbol gene type direction distance location
XLOC_026609 si:dkeyp-72e1.7 coding downstream 54925 36610085 ~ 36612877 (-)
XLOC_026608 si:dkeyp-72e1.6 coding downstream 60918 36605149 ~ 36606884 (-)
XLOC_026607 rrn3 coding downstream 65302 36589427 ~ 36602500 (-)
XLOC_026606 NA coding downstream 80666 36583100 ~ 36587136 (-)
XLOC_026605 ppl coding downstream 185816 36459790 ~ 36481986 (-)
XLOC_026611 abcc6b.1 coding upstream 32810 36744518 ~ 36750068 (-)
XLOC_026612 FO744883.1 coding upstream 44325 36756033 ~ 36756149 (-)
XLOC_026613 abcc6b.1 coding upstream 44605 36756313 ~ 36764865 (-)
XLOC_026614 abcc6b.2 coding upstream 95934 36807642 ~ 36824190 (-)
XLOC_026615 ramp2 coding upstream 125003 36836711 ~ 36846496 (-)
XLOC_026600 NA non-coding downstream 344177 36320239 ~ 36323625 (-)
XLOC_026588 NA non-coding downstream 1093351 35565128 ~ 35574451 (-)
XLOC_026585 NA non-coding downstream 1719741 34947402 ~ 34948061 (-)
XLOC_026580 NA non-coding downstream 2025829 34641048 ~ 34641973 (-)
XLOC_026617 NA non-coding upstream 241917 36953625 ~ 36954088 (-)
XLOC_026618 CT573704.1 non-coding upstream 256163 36967871 ~ 36967993 (-)
XLOC_026619 NA non-coding upstream 257695 36969403 ~ 36972222 (-)
XLOC_026621 CT573704.2 non-coding upstream 363990 37075698 ~ 37075813 (-)

Expression


Co-expression Network