LOC110531581 (LOC106578037)


Basic Information

Item Value
gene id LOC110531581
gene name LOC106578037
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14792676 ~ 14803212 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614849.2
TGTATTCCATAACAGTTGTTGTTGTGcactgccagtgtgtgtgtggttgagtgtgtgagtgtttgtgggatttaaatgagtgagtgtgtgtgatgaGGGCCTTCTTCCTCTTCTGGTCCCCACTCTGAAAGAGAACTTAGAGCTGTGATGATGTCTGGTGAAATCATCTACTCCGATGTTACATTCACTCGGCATCAGAACCAAGATACTGGAGCAGAAAGTGCAGTTTCTAATGGAGTAGCCGAACGTGAAGAGGATATCACATACTCTGAGGTTAAAAGACCGGGAGGTAGAGCTAGTGAGCAGAAGGATCCTGGGAAAGGAAGGGACCATGGCAATAGTGACCCCACTCCCCCAGTGGGGTCAAAGGCTACAATCCCTGAGGGAGGGTATGGGAGAGTTCCCGTGGTGACCctgatgtgtctctgtgttctactGCTGGGCCTGGCGATCACTCTGGGAATCCTCTATGCTTCCAACATGACTAGTCTTCAAGCTGAGGGGGCTCGCTTTGCCCAGATGAAAGAGAATCTAACAGGGAAACTGCATGAACTGCAAGACAGCTATAAGAGACTACAGAATGAGACCCACAACGTAACAATCCAGAGAGACCTGTTATCCTCAGAGCTACAAGACTGTAATGCCAACCTTACTAGGGTCAAAGATCTCCTGGCAACCATCCAAGGGAATCAGAAGAGATGTAATACCAGTCAGCTGTGTTCTCCTGGCTGGGAGTTCTACAATGGATCATGTTACTACTTCTCTAAAGAAAAAATGACCTGGGGACAGAGTCAGTACGCCTGCATCCACGATGGAGGACACCTGGTCATCATAGAGAGTCACCAGGAGCAGGAGTTTATAAAACAGAGAGTGGTAGCACTGGGAATTGATCCTTATGAACACAGCCCCTGGATTGGACTGACAGATGAGAAGCAAGAGGGATTGTGGGTGTGGATGGACAGTACAACTCTTAATGAGAACATCAAGTACTGGGACTTTGCCGAACCAAATAACTGTGGGCCTAAAGGTGAAAGTGAAAACTGTGTCCGAATTGGTCAAAATTGCCACAAACAAAAAAATTGTTGGTTTGACTTTCCATGTGTCGAACCATCTAAGAGAATCTGTGAGAGTCGTGCAGTCTGTGAAAGTCGGGCAGGCACTCTATAGTGAAGCCAAATGTAGTGTATTGAATGAGTAACCAGCACAAGGCACCGTATTGTTGGGAAGTATTTAGGGCCCATTTTCTAGACACAGACCAaacctacactcttagaagaaaaggttccaaaaggggtTTTCgggtgtccccataggagaacgaTTTTTGACTCCAAGTAGAAGCCTTTTTGACTCCAGGTAGAACACTATTGGGTTCCGTGTAGATGAAGATCTCTgttgaaagggttctacctggaaccaaaagcactacttcaaatggttctcctatggggacagacaaTATATAGCcactttttttctaagaatgtattGCTGGACTGAGCTTGTCATATGTCATTTTGATTAATGCAGAGTATTACCTTCATTTGAGCTTGTGTCCACACAACAAATACTTCTGCTTTTAGCTATAATTGAATGTCATACCTGTGTAGTTCCTCCACATAGCCAGCTGGATCTGACAGATCCTACTGATATGGATGTAACTTTTTTATTTATATTGGTAAATATGCTTTCCATTGTAAAATTTGATATTTTAGTCAATTAACAAACGGTCTTGTCCACAGTGACCTACAATTAGTGCATTTTAGTGAATAATTAGATATACAGATCAATGCAGTAGTATTAGAAAGCCTGCATGGTTTAGCCTGCATGGGTTAGCCTGTAAGGTTTAGACTGTCATCTCAACCTTCTATTCAGGAAAATGTATCTAGGTTGTATTTCTAACAAtaggattacatttttttattcagTTGATTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGTTGTTTTTACAGATGTATATGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGTTGTTTTTACAGATGTATATGTAACAATGGGATTCATTAATTCAGTTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACACTGGGATTCATTAATTCAGTTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGTTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGTTTCATTAATTCAGTTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATGTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGTTTCATTAATTCAGTTGTTTTTACAGATCTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATGTATTTGTAACAATGGGATTCATTAATTCAGTTGTTTTTACAGGTGTATTTGTAACAATGGTATTCATTAATTCAGCTGTTTTTACAGATTTATTTGTAACAATGGGATTCATTAATTCAGCTGTTTTTACAGATGTATTTGTAACAATGGGATTCATTCATTCAGCTGTTTTTATATATGTATTTC

Function

NR:

description
asialoglycoprotein receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614849.2 True 2848 mRNA 0.38 9 14792676 14803212

Neighbor

gene id symbol gene type direction distance location
LOC110531584 LOC106578021 coding downstream 100309 14687934 ~ 14692367 (-)
LOC110531585 LOC106608993 coding downstream 145922 14633925 ~ 14646754 (-)
LOC110531563 LOC106578017 coding downstream 165861 14531994 ~ 14626815 (-)
LOC110531564 LOC106578016 coding downstream 261172 14509040 ~ 14531504 (-)
LOC110532933 LOC106578015 coding downstream 284342 14484740 ~ 14508334 (-)
LOC118966000 LOC106578026 coding upstream 214819 15018031 ~ 15035380 (-)
LOC110531572 LOC106577851 coding upstream 460954 15264166 ~ 15268722 (-)
LOC110531571 LOC106577852 coding upstream 466978 15270190 ~ 15281871 (-)
LOC118966001 NA coding upstream 481099 15284311 ~ 15285624 (-)
LOC110531570 LOC106577853 coding upstream 482671 15285883 ~ 15321030 (-)
G774432 NA non-coding downstream 49699 14742681 ~ 14742977 (-)
G774430 NA non-coding downstream 57237 14730868 ~ 14735439 (-)
G774428 NA non-coding downstream 64975 14724931 ~ 14727701 (-)
G774419 NA non-coding downstream 74530 14716505 ~ 14718146 (-)
G774424 NA non-coding downstream 82446 14710024 ~ 14710230 (-)
G774485 NA non-coding upstream 23957 14827169 ~ 14827561 (-)
G774491 NA non-coding upstream 31411 14834623 ~ 14834887 (-)
G774513 LOC106578038 non-coding upstream 61142 14864354 ~ 14876876 (-)
G774518 NA non-coding upstream 70825 14874037 ~ 14880611 (-)
G774565 NA non-coding upstream 158078 14961290 ~ 15117567 (-)
G774427 LOC106578022 other downstream 68154 14724054 ~ 14724522 (-)
LOC118966145 LOC106599223 other downstream 538519 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 805094 13977459 ~ 13987582 (-)
G773168 NA other downstream 1093348 13697179 ~ 13699328 (-)
G773163 NA other downstream 1200588 13586326 ~ 13666937 (-)
G774562 LOC106577809 other upstream 434846 15238058 ~ 15253973 (-)
G774702 LOC106577875 other upstream 549095 15352307 ~ 15361319 (-)
G774954 NA other upstream 821990 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 979145 15781909 ~ 15787666 (-)
G775139 NA other upstream 1059108 15862320 ~ 15863834 (-)

Expression


Co-expression Network