LOC118965998


Basic Information

Item Value
gene id LOC118965998
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 14947255 ~ 14949071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053184.1
TAATATTACAATAATATTCAAACAAATCTTAAAATATATTTCTCATTTACTCACCTCCAGAAATATCCATTAGGAGGGCTTTACAGACTATGTTATCTGTCCGGGCAGTTAAATATTAGGGCCTTTGGGTTTGCGCTAAAGCCGTGCTAACCGTGTTAAAAATAGACGTTCTGTCCCTAACTTGTTAAAGTACGGAATGAGTTGAGAGATATCCTGTATGCAACCACCCCCCTGTATGTTTGCTTTAGACCAAAAGGCTGTGAATTCAAAGAGCCGTTCTGTCAACCGGTTTGTTGGGGGTCCTGGTGCGTtgattagatatccatgtttaaCCCCGGGCCGATACCTTGACATGTCATATGCTGGATAGTTCAAACTTTGGGTTTCAAACGATTCTCTACAGATGGGACCCCATGTTGAACCCACACAAACAAACCCTTTGTTTtttgaaacgcacacacacacacacactcctgctgctcCGTCACACGCACACTCATGCACGCACCCTGATTTTCAATGTCTTTTTCTTCGCGACAGAGTTGGCTGAAGATGTGAAATACCGTTTCACATAGTTACGGATATTACAGTTGTCTGCGCCAGACCCTAGCGTGAGAGAAAAGACCGCTCCCCCTTTAGTTAAATGGATATAGGGTCCGGTTAGCCCTGACCATTATCCGTTTCCAATTCCCCATCGCAAAGTCTTTTGCCCGCTCCATCGAAGCTCTGGCCGTTTTCACTCCAGGGAAAGATCCGCCTTCTGCCTTGTGGGTCTTGGGAATGTCTCAACGATAACCGAGGCCATCGCCGTAATTGTTCCCGATTTTCGAAAAGACTGTCCAGCTTATTCATCAGTGTTCTGAAAATACGGTAATCGCGCCATTTAAAACTGAACATTATTTGAAAAAATTTTACATCCTTGCATGCTTTGGAAGATACATATGAACTGACCGTTTTCGAAGCATTTGCACTATCAAATTGTTCACATGCTAAAATTGTCACTCTGGAGTCCGGTGTATACGCCATTGAAGCGATTCTTAGGGCCATTAGATCACTTCGGCCACAGACCTGTTCTTCCAACGCATATCCGGGCAGCCTTGAAGCACTCAGGGCGCGTTCCATTTGACACAGCGCTAGTCTTATTTTAAGCCATTCTCTCATCCTTAGCGCTGGAGAAAAACTCTCGGGTTCTGCCCGATAAAAGGGTTGGGACACGCTGTCTGTGAATATCTTAACCGTAGATTCCTCCGGGCTAAAGATGTAAGACATATGCCCGTCGCTTGTACACAAAAAGCCCTTAAAACATTCGGGAGCCTCACGCAAAACATCCTCCAGGCTTTTGTCGTTGGATTCATGACATGAGCTGCAAAGCACTCCGATAATTGCCCTTGTAGACATATTTTAGATGTTTAATATTCAAGTCTTTATTTTAAAAATTGCTTGTTCTGGACATTTATAATGCATATGCCACAGCCCAGGACATTCCGGCTTCATCAGATAAACATATGGGCGATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053184.1 True 1517 mRNA 0.44 3 14947255 14949071

Neighbor

gene id symbol gene type direction distance location
LOC118966162 LOC106578024 coding upstream 34998 14905007 ~ 14912257 (+)
LOC110531577 LOC106578038 coding upstream 58011 14864590 ~ 14889244 (+)
LOC110532999 LOC106578032 coding upstream 94770 14849640 ~ 14852485 (+)
LOC110531580 LOC106578024 coding upstream 122011 14816295 ~ 14825244 (+)
LOC110531582 LOC106578023 coding upstream 183752 14756863 ~ 14763503 (+)
LOC110531575 NA coding downstream 366 14949437 ~ 14972051 (+)
LOC118936439 LOC106596013 coding downstream 136610 15085681 ~ 15185946 (+)
LOC118965999 LOC106596013 coding downstream 268526 15217597 ~ 15248137 (+)
LOC110531573 LOC106577850 coding downstream 303394 15252465 ~ 15262643 (+)
LOC118966002 NA coding downstream 393853 15342924 ~ 15348526 (+)
G773871 NA non-coding upstream 27034 14919218 ~ 14920221 (+)
G773811 LOC106578037 non-coding upstream 146128 14795963 ~ 14801127 (+)
G773761 NA non-coding upstream 213803 14728870 ~ 14733452 (+)
LOC110532934 LOC106578022 non-coding upstream 223397 14716449 ~ 14740445 (+)
G773752 NA non-coding upstream 246743 14700214 ~ 14700512 (+)
G773917 NA non-coding downstream 154786 15103857 ~ 15111275 (+)
G773918 NA non-coding downstream 158510 15107581 ~ 15108957 (+)
G773940 NA non-coding downstream 209728 15158799 ~ 15219494 (+)
G773808 NA non-coding downstream 215365 15164436 ~ 15236467 (+)
G773950 NA non-coding downstream 249693 15198764 ~ 15217371 (+)
G773601 NA other upstream 563089 14382670 ~ 14384166 (+)
G773583 NA other upstream 621422 14306630 ~ 14328474 (+)
G773562 LOC106577828 other upstream 632005 14311468 ~ 14315250 (+)
G773535 LOC106577997 other upstream 730403 14213449 ~ 14216852 (+)
G773437 NA other upstream 918727 14024873 ~ 14028528 (+)
G773983 LOC106577853 other downstream 349387 15291949 ~ 15299214 (+)
G774021 NA other downstream 426153 15375224 ~ 15377188 (+)
G774065 NA other downstream 516289 15465360 ~ 15465624 (+)
LOC110531590 LOC106577858 other downstream 522436 15471215 ~ 15505643 (+)
G775142 NA other downstream 917018 15866089 ~ 15866708 (+)

Expression


Co-expression Network