LOC118966001


Basic Information

Item Value
gene id LOC118966001
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15284311 ~ 15285624 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053189.1
ggatgTTCCTTCATACAGAGTGGCATAGGTCTGAACTGAAAGACACCTTTTGCACAGACGACTTGTATTCATTGGGAGAGGAAGTCTGTTAACCCTCTAAGTGTGTGGTCAGCGTACGATATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACACTACAGTGTGTGTGGGGTCAGCGTACGATATGTCTGTGTGACACTACAttgtgtgtgtggtcagtgtACGATATGTCTGTGTGACACTACAGTGTGTGTTGTCAGCGTATGATATGTCTGTGACACTACAGTGTGTGGTCAGCGTACGATATGTCTGTgacactacagtgtgtgtgtgtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACActacagtgcgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtgtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTgacactacagtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTgacactacagtgtgtgtgtgtgtggtcagcgtACGATATGTCTGTGTGACACTACAGTGTGTGTTGGGGCTCCAGAGGGGATTTTTCGTTTACCTTGGCATAGTGGACGATTCCAGACTCTTACTTTCATTCTGTCTCTTAGCTCGACATTCGTTTACCCACTCTTTTGAGTAGGTTATTTTTCTTCTGGTCTTTTGTCTGTGTTTTTCCTACATTTCTGTCTAGAGTTCTCTAACCATCTCTCTCACATAGAGGTTAGAACTGATGGTTCCTCCCTTTGTCAAACCGCTGCACAACAAACTAGGGCATGCATACACATGTCTTTAATGATCATTTTCTCTTTTAATCTTGTTCACTTATGTAATATAGAAATCACAATCTTGTATTTTTCCTGGAAAGCCTTTGTCCTTTCTTTTGATTTTATGTTTGTAGATACGACGACGACAAAAAGTGTACATTATTTTCTCTCACATTTGAATAAATGGTGAGGTTGTTAGCTGCGAAGAAGGAAAATTAAGTCTTGTTGCAGGTTCATGTGTATTGTGACATTAAAAAGAACTTTGAAAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053189.1 True 1281 mRNA 0.44 2 15284311 15285624

Neighbor

gene id symbol gene type direction distance location
LOC110531571 LOC106577852 coding downstream 2440 15270190 ~ 15281871 (-)
LOC110531572 LOC106577851 coding downstream 15589 15264166 ~ 15268722 (-)
LOC118966000 LOC106578026 coding downstream 248931 15018031 ~ 15035380 (-)
LOC110531581 LOC106578037 coding downstream 481099 14792676 ~ 14803212 (-)
LOC110531584 LOC106578021 coding downstream 591944 14687934 ~ 14692367 (-)
LOC110531570 LOC106577853 coding upstream 259 15285883 ~ 15321030 (-)
trnaa-ugc-30 NA coding upstream 11557 15297181 ~ 15297253 (-)
LOC110531568 LOC106577856 coding upstream 93705 15379329 ~ 15436702 (-)
rbm14b LOC106577857 coding upstream 152882 15438506 ~ 15454319 (-)
LOC110531589 ccs coding upstream 168786 15454410 ~ 15462353 (-)
G774675 NA non-coding downstream 15012 15269030 ~ 15269299 (-)
G774673 NA non-coding downstream 34011 15249229 ~ 15250300 (-)
G774523 NA non-coding downstream 47842 15164072 ~ 15236469 (-)
G774641 NA non-coding downstream 53276 15159121 ~ 15231035 (-)
G774636 NA non-coding downstream 67075 15155093 ~ 15217236 (-)
G774683 NA non-coding upstream 20726 15306350 ~ 15307817 (-)
G774728 NA non-coding upstream 119878 15405502 ~ 15408709 (-)
G774767 NA non-coding upstream 221708 15507332 ~ 15507668 (-)
G774720 LOC106577859 non-coding upstream 273833 15559457 ~ 15561311 (-)
G774807 NA non-coding upstream 297389 15583013 ~ 15583220 (-)
G774562 LOC106577809 other downstream 30338 15238058 ~ 15253973 (-)
G774427 LOC106578022 other downstream 559789 14724054 ~ 14724522 (-)
LOC118966145 LOC106599223 other downstream 1030154 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 1296729 13977459 ~ 13987582 (-)
G773168 NA other downstream 1584983 13697179 ~ 13699328 (-)
G774702 LOC106577875 other upstream 66683 15352307 ~ 15361319 (-)
G774954 NA other upstream 339578 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 496733 15781909 ~ 15787666 (-)
G775139 NA other upstream 576696 15862320 ~ 15863834 (-)
G775532 NA other upstream 627212 15912836 ~ 15913294 (-)

Expression


Co-expression Network