trnaa-ugc-30


Basic Information

Item Value
gene id trnaa-ugc-30
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 15297181 ~ 15297253 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-30
AGTcccgtggctcagttggtagagcatggtgcttgcaacgccagggttgtgggttctatTCCcagggggacca

Function

NR:

description
PREDICTED: nuclear GTPase SLIP-GC-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-30 True 73 mRNA 0.61 1 15297181 15297253

Neighbor

gene id symbol gene type direction distance location
LOC118966001 NA coding downstream 11557 15284311 ~ 15285624 (-)
LOC110531571 LOC106577852 coding downstream 15310 15270190 ~ 15281871 (-)
LOC110531572 LOC106577851 coding downstream 28459 15264166 ~ 15268722 (-)
LOC118966000 LOC106578026 coding downstream 261801 15018031 ~ 15035380 (-)
LOC110531581 LOC106578037 coding downstream 493969 14792676 ~ 14803212 (-)
LOC110531568 LOC106577856 coding upstream 82076 15379329 ~ 15436702 (-)
rbm14b LOC106577857 coding upstream 141253 15438506 ~ 15454319 (-)
LOC110531589 ccs coding upstream 157157 15454410 ~ 15462353 (-)
LOC110531592 LOC106577860 coding upstream 256221 15553474 ~ 15569492 (-)
LOC110531593 LOC106577861 coding upstream 272382 15569635 ~ 15578714 (-)
G774681 NA non-coding downstream 11263 15284319 ~ 15285918 (-)
G774675 NA non-coding downstream 27882 15269030 ~ 15269299 (-)
G774673 NA non-coding downstream 46881 15249229 ~ 15250300 (-)
G774523 NA non-coding downstream 60712 15164072 ~ 15236469 (-)
G774641 NA non-coding downstream 66146 15159121 ~ 15231035 (-)
G774683 NA non-coding upstream 9097 15306350 ~ 15307817 (-)
G774728 NA non-coding upstream 108249 15405502 ~ 15408709 (-)
G774767 NA non-coding upstream 210079 15507332 ~ 15507668 (-)
G774720 LOC106577859 non-coding upstream 262204 15559457 ~ 15561311 (-)
G774807 NA non-coding upstream 285760 15583013 ~ 15583220 (-)
G774562 LOC106577809 other downstream 43208 15238058 ~ 15253973 (-)
G774427 LOC106578022 other downstream 572659 14724054 ~ 14724522 (-)
LOC118966145 LOC106599223 other downstream 1043024 14249401 ~ 14254157 (-)
LOC110531538 NA other downstream 1309599 13977459 ~ 13987582 (-)
G773168 NA other downstream 1597853 13697179 ~ 13699328 (-)
G774702 LOC106577875 other upstream 55054 15352307 ~ 15361319 (-)
G774954 NA other upstream 327949 15625202 ~ 15625920 (-)
LOC110531603 groa other upstream 485104 15781909 ~ 15787666 (-)
G775139 NA other upstream 565067 15862320 ~ 15863834 (-)
G775532 NA other upstream 615583 15912836 ~ 15913294 (-)

Expression


Co-expression Network