trnak-cuu-3



Basic Information


Item Value
gene id trnak-cuu-3
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16132804 ~ 16132876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnak-cuu-3
Gcccggctagctcagtcggtagagcatgagactcttaatctcagggtcgtgggttcgagccccacgttgggcg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnak-cuu-3 True 73 mRNA 0.58 1 16132804 16132876

Neighbor


gene id symbol gene type direction distance location
trnav-uac-15 NA coding upstream 3002 16129730 ~ 16129802 (+)
trnav-uac-14 NA coding upstream 11768 16120964 ~ 16121036 (+)
ino80b znhi4 coding upstream 434981 15692085 ~ 15697823 (+)
clcn3 LOC106577864 coding upstream 472710 15611575 ~ 15660094 (+)
nit1 nit1 coding upstream 521281 15608430 ~ 15611523 (+)
trnan-guu-4 NA coding downstream 1421 16134297 ~ 16134370 (+)
trnan-guu-5 NA coding downstream 10624 16143500 ~ 16143573 (+)
trnan-guu-6 NA coding downstream 15785 16148661 ~ 16148734 (+)
trnan-guu-7 NA coding downstream 20960 16153836 ~ 16153909 (+)
trnan-guu-8 NA coding downstream 26110 16158986 ~ 16159059 (+)
G775291 NA non-coding upstream 137 16132459 ~ 16132667 (+)
G775290 NA non-coding upstream 601 16131724 ~ 16132203 (+)
G775236 NA non-coding upstream 86622 16045606 ~ 16046182 (+)
G775234 NA non-coding upstream 90177 16042162 ~ 16042627 (+)
G775231 NA non-coding upstream 95414 16037084 ~ 16037390 (+)
G775294 NA non-coding downstream 2721 16135597 ~ 16135829 (+)
G775296 NA non-coding downstream 3772 16136648 ~ 16136992 (+)
G775298 NA non-coding downstream 17249 16150125 ~ 16150593 (+)
G775343 NA non-coding downstream 119024 16251900 ~ 16252241 (+)
G775344 NA non-coding downstream 119467 16252343 ~ 16252544 (+)
G775142 NA other upstream 266096 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 631728 15471215 ~ 15505643 (+)
G774065 NA other upstream 667180 15465360 ~ 15465624 (+)
G774021 NA other upstream 755616 15375224 ~ 15377188 (+)
G773983 LOC106577853 other upstream 833590 15291949 ~ 15299214 (+)
G775306 NA other downstream 53400 16186276 ~ 16187450 (+)
LOC110532936 LOC106577844 other downstream 104498 16233342 ~ 16250864 (+)
LOC110532939 NA other downstream 206818 16315734 ~ 16342810 (+)
G775945 NA other downstream 550318 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 1164179 17292470 ~ 17305629 (+)

Expression



Co-expression Network