XLOC_026617



Basic Information


Item Value
gene id XLOC_026617
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 36953625 ~ 36954088 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053072
GTGGAACTTGATGACAGGACTAGTCTGGGCTCTGTAAAATACAATACTTGCTTACACCGCTTGCACACTAATGCGCCTGCTATTGAAACTCTTGCTGACAGAGCTAGCACGCTAACCTCTGCAGTGTCTGCACGAAGTGGCCAAAACTGTCCTAAAATTCACCAGATTTGGACCAGCTGTTCTGTCGAGATGATGAGCCATGGAGAGGCTGCAGGTGCCCCCTGCCAACACCCAGAAGACCCTATTTTACCCTGCTGGGAAACAAAGCAGCTGAAGCATTTCAAGAtctcataaaaacaaaaatagcttgATGATA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053072 True 316 lncRNA 0.47 2 36953625 36954088

Neighbor


gene id symbol gene type direction distance location
XLOC_026616 cntnap1 coding downstream 8876 36904039 ~ 36944749 (-)
XLOC_026615 ramp2 coding downstream 107129 36836711 ~ 36846496 (-)
XLOC_026614 abcc6b.2 coding downstream 129435 36807642 ~ 36824190 (-)
XLOC_026613 abcc6b.1 coding downstream 188760 36756313 ~ 36764865 (-)
XLOC_026612 FO744883.1 coding downstream 197476 36756033 ~ 36756149 (-)
XLOC_026618 CT573704.1 coding upstream 13783 36967871 ~ 36967993 (-)
XLOC_026619 NA coding upstream 15315 36969403 ~ 36972222 (-)
XLOC_026620 tubg1 coding upstream 105715 37059803 ~ 37082618 (-)
XLOC_026621 CT573704.2 coding upstream 121610 37075698 ~ 37075813 (-)
XLOC_026622 mlx coding upstream 181428 37135516 ~ 37148594 (-)
XLOC_026606 NA non-coding downstream 366489 36583100 ~ 36587136 (-)
XLOC_026600 NA non-coding downstream 630000 36320239 ~ 36323625 (-)
XLOC_026588 NA non-coding downstream 1379174 35565128 ~ 35574451 (-)
XLOC_026585 NA non-coding downstream 2005564 34947402 ~ 34948061 (-)
XLOC_026625 NA non-coding upstream 627434 37581522 ~ 37584807 (-)
XLOC_026626 NA non-coding upstream 680012 37634100 ~ 37649389 (-)

Expression



Co-expression Network