LOC118966164


Basic Information

Item Value
gene id LOC118966164
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16308133 ~ 16309737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989261.1
ATGGCTGGGGGTCCCTGTTCCACACTGTGTACCCTGTATACGTATGTGTACCCGGTATACGTGTACCCTGTAGATGTGTACCCTGTAGATGTGTACCCTGTAGATGTGTTCCCTGTGTATGTTTACCCTGTAGATGTGTACCCTGTAGATGTGTTTCCTGTATATGTGTACCCTGTAGATGTGTTCCCTGTAGATGTGTACCCTGTGTATGTGTACCCTGTATATGTGTACCCTGTGTATGTGTACCCTGTAGATGTGTTCCCTGTGTATGTGTACCCTGTAGATGTGTACCCTGTAGATGTGTCCCCTGTATATGTGTACCCTGTGTATGTGTACCTTGTATATGTGTACCCTGTGTATGTGCACCCTGTAGATGTGTACCCTGCATATGTGTTCCCGGTATATGTGTACCCTGTAGATGTGCTCCCTGTATATGTGTACCCTGTATATGTGTACCCTGTGTATGTGTACCCTGTATATGTGTACCCTGTATCCTTTCcatctccttccttcctgccttccttccCTCCCGCCCTGGTGTCTGGGAAGCACCAGGACCGCCTGTCCCTGGCCAGAGGCTTCTACCTGGAGAAGATCTTCGGAGGCTGGAGAGACCCTGGAGCCGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989261.1 True 630 mRNA 0.50 3 16308133 16309737

Neighbor

gene id symbol gene type direction distance location
LOC110532936 LOC106577844 coding upstream 57552 16233342 ~ 16250864 (+)
rgp1 rgp1 coding upstream 77326 16220150 ~ 16230807 (+)
trnan-guu-12 NA coding upstream 128521 16179538 ~ 16179612 (+)
trnan-guu-11 NA coding upstream 133659 16174401 ~ 16174474 (+)
trnan-guu-10 NA coding upstream 138800 16169260 ~ 16169333 (+)
LOC110532939 NA coding downstream 5997 16315734 ~ 16342810 (+)
LOC110531617 NA coding downstream 56751 16366488 ~ 16379577 (+)
LOC110533002 LOC106577819 coding downstream 130915 16440652 ~ 16444014 (+)
LOC110531620 LOC106577818 coding downstream 145168 16454905 ~ 16473400 (+)
LOC110531621 LOC106577824 coding downstream 272672 16582409 ~ 16588385 (+)
G775373 NA non-coding upstream 1156 16306762 ~ 16306977 (+)
G775372 NA non-coding upstream 2262 16305213 ~ 16305871 (+)
G775369 NA non-coding upstream 5801 16300915 ~ 16302332 (+)
G775365 NA non-coding upstream 13314 16294563 ~ 16294819 (+)
G775350 NA non-coding upstream 46441 16261386 ~ 16261692 (+)
G775394 NA non-coding downstream 42391 16352128 ~ 16353485 (+)
G775406 NA non-coding downstream 72608 16382345 ~ 16427674 (+)
G775426 NA non-coding downstream 106400 16416137 ~ 16418142 (+)
G775448 NA non-coding downstream 141358 16451095 ~ 16451626 (+)
G775477 NA non-coding downstream 193652 16503389 ~ 16503609 (+)
G775306 NA other upstream 120683 16186276 ~ 16187450 (+)
G775142 NA other upstream 441425 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 807057 15471215 ~ 15505643 (+)
G774065 NA other upstream 842509 15465360 ~ 15465624 (+)
G775945 NA other downstream 373457 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 987318 17292470 ~ 17305629 (+)
G776487 NA other downstream 1070888 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 1348460 17658197 ~ 17659145 (+)

Expression


Co-expression Network