LOC110531617


Basic Information

Item Value
gene id LOC110531617
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16366488 ~ 16379577 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989263.1
TGGAGGTGAAGATTAAGACTGGACTAGTCTGTTAAACTACACTATACATCTCTGAAAAACCAAGGGATTGGTTTGTGTTTAAAGGATCTGTTTTAGTGGACTCAGAGAGAACAATGTTGAAACAAACAGATACTCCTGAGACTGTGCGTCTGTCTGACTCCATCAATGATGAAGAGATAAAGTATGTGAAGGAGAGGAAGACTCTGATTAAGAAGTGGCTGAAAAGTCTGGATATCTACTGTGAACTAgAGGATGTTCCTAACATAGCGTTGCTGGGgtcaggtggaggagagagggcagcAGTGGGCATGCTGGGATCTCTGCATCAGCTGAAAAAGGACGACATGCTGGGCAGCCTCCTCTATATGTGTGGGGTGTCAGGCACcacctggtgcatgtCATCCCTGTACAGCGATCCAGATTGGTCGCTGAATAATCGTTGTGTTGAGGTGATAAAGAAGATGAAGGGTCCTATGGTGGATTTGAAGAAGGTTGTGGACTGGCTGATAATGCGGGAAGACAGCGACCAGGACTTCAGCCTCACTGACTTCTGGGGCGTCTTCACTGCCTGCTATTTCATGAATGAGATGGACACTCGCCGTCTCTCTGAAGATGCTCACAGGGACAGCACCAACCCCTACCCCATCTACAACGCCATAGAACTGGACTGCTACAGACAGCATTGCACTAAAGGGGTGTGGTTTGAGATGACCCCCCACGAGAGCGGCTTCTCCGGATTGGGCGCTTTCGTCCCCACTTCCTGTCTCAGGAGCCGGTTTAAAGGCAGGACTCTGATAGAGAAGAGGAAGGAAATGGACATGGTTCTGCTTacaagcaaacgtgcacacacacatcaatttattgttgtttgttgttgctggGCAGGTATCTGTGGGAGTGCCTTTGCAGACACAAAAGAGAACATTGCTGAGGTAGCAAAAAAAATCTGGGGCTTATTTGAAGGGCACGAGAGCATGATGTTGAAAGAGAACATGAATATGGTTGAGAGAAGCGGGAAGGTaaaggtgtgtgagtgtgtgccctCCCGAgtggtgaggtgtgtgtctgaGCTGATCAAGTATGCTGAGGACCCAGATCCACTGAAGACATGGAAAGTCATCACCCCACTGAGACAACTACTGGAAGGTATTGTGAGCAGTAAGGGTGAGATGCTGTGGAACATGGACTCTGAGAGCTGGAAGAGAACCAGCCTGGTGGAGAGAAAGAAGTTCATAGAGACAGTCAGTCTGGAGCTCATCCTCTCCTCAGACAGCTGGGCAAAAGACTGGAAGGACAAACGCTGCCCCTGCATCGATTCAATCTTTTGGATTGTACTGATCTTTTTCCTTCTGCTCATTGAATGGAAATGGGGAACCACATCCAACTTCCTCTTCAAGATCAAAGatGCTAGAGTTCCGGAGAGCATGGCATCCAATGAGAAGATTCACCTGGTAGACGCTGCGTTAAAGATCAACTCTCCCTACCCCCCCGTCCTGCGTACTTCGAGGAAGGTCGACCTCATCATCTCCTTGGACTTCAGCGAAGACCCATttgagACGGTGTTTAGTGCCAAAAAGTATGCGGATGAGCTGAAGCTTCCCTTTCCCCCAGTGAATGAGGATATAAGGAAGGAGAAAGACCATCCTCAGGACTGCTACGTTTTTGAGGGGCGACGCCCTGAAGAGCCCACCATCATGCACATGCCCCTGTTCAACCTGCGGAACTGCCATGACGAGAAAGGGAttaagaaggagagggagaattaCAAAACATTCCAGCTTCACTACGGTGCGCCGGAGATCGACCACCTCCTGGAGAAGGCCCAGGACAACATGAGGAACAACAGAGACAGGATCCTGGGACAGATCATTATGGCCATCCAACGCAGAAAGAAGCGCATGTCAGTGGCTCAATAGTTTTTATCAGTGGTGGaaagtatctgtactttactattaatacttgacaacttttacttcacgaCATTACTAAAGAagataatatactttttactccatacattttctctgactgCCGAAATTggcttgttacattttgaatgcctaTCAGAACAGAAAAAGtctaattcatgcacttatcaagaggacATTCTTgttcctccctactgcctctgatctggcagccTGATTAGAAGCACCTGCTGTGCATCAGTTGCTCACCTGTGTTCCCTACAAATGCTGTCTTGAATCAAAAGGATTTGTACCTACACACTGGAGAAAGTTGCAGCGTCTGTGTATGTTATCCCTAATGcagtgaaaataataaaaataatataaaaaattaACTAAGCTTTTTGAGACATCT

Function

NR:

description
PREDICTED: cytosolic phospholipase A2 gamma-like isoform X2

GO: NA

KEGG:

id description
K16342 PLA2G4, CPLA2; cytosolic phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989263.1 True 2322 mRNA 0.47 14 16366488 16379577

Neighbor

gene id symbol gene type direction distance location
LOC110532939 NA coding upstream 23971 16315734 ~ 16342810 (+)
LOC118966164 NA coding upstream 56751 16308133 ~ 16309737 (+)
LOC110532936 LOC106577844 coding upstream 115907 16233342 ~ 16250864 (+)
rgp1 rgp1 coding upstream 135681 16220150 ~ 16230807 (+)
trnan-guu-12 NA coding upstream 186876 16179538 ~ 16179612 (+)
LOC110533002 LOC106577819 coding downstream 61075 16440652 ~ 16444014 (+)
LOC110531620 LOC106577818 coding downstream 75328 16454905 ~ 16473400 (+)
LOC110531621 LOC106577824 coding downstream 202832 16582409 ~ 16588385 (+)
LOC110531622 LOC106577817 coding downstream 209638 16589215 ~ 16593605 (+)
LOC110531623 LOC106577803 coding downstream 397957 16777534 ~ 16821342 (+)
G775394 NA non-coding upstream 13003 16352128 ~ 16353485 (+)
G775373 NA non-coding upstream 59511 16306762 ~ 16306977 (+)
G775372 NA non-coding upstream 60617 16305213 ~ 16305871 (+)
G775369 NA non-coding upstream 64156 16300915 ~ 16302332 (+)
G775365 NA non-coding upstream 71669 16294563 ~ 16294819 (+)
G775406 NA non-coding downstream 2768 16382345 ~ 16427674 (+)
G775426 NA non-coding downstream 36560 16416137 ~ 16418142 (+)
G775448 NA non-coding downstream 71518 16451095 ~ 16451626 (+)
G775477 NA non-coding downstream 123812 16503389 ~ 16503609 (+)
G775482 NA non-coding downstream 130264 16509841 ~ 16510040 (+)
G775306 NA other upstream 179038 16186276 ~ 16187450 (+)
G775142 NA other upstream 499780 15866089 ~ 15866708 (+)
LOC110531590 LOC106577858 other upstream 865412 15471215 ~ 15505643 (+)
G775945 NA other downstream 303617 16683194 ~ 16683491 (+)
LOC110532942 LOC106577806 other downstream 917478 17292470 ~ 17305629 (+)
G776487 NA other downstream 1001048 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 1278620 17658197 ~ 17659145 (+)
G777111 NA other downstream 1622312 18001889 ~ 18002182 (+)

Expression


Co-expression Network