Item | Value |
---|---|
gene id | LOC110532940 |
gene name | LOC106608858 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 16595063 ~ 16751294 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like isoform X2 |
id | description |
---|---|
K24469 | SVEP1; sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036987453.1 | False | 11942 | mRNA | 0.57 | 50 | 16595063 | 16751293 |
XM_036987454.1 | True | 11772 | mRNA | 0.57 | 49 | 16595063 | 16751294 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC118966166 | NA | coding | downstream | 13258 | 16580259 ~ 16581805 (-) |
LOC118966165 | NA | coding | downstream | 21171 | 16555795 ~ 16573892 (-) |
LOC110531619 | LOC100380775 | coding | downstream | 154915 | 16427088 ~ 16440148 (-) |
LOC110531616 | tesk1 | coding | downstream | 305195 | 16263464 ~ 16289868 (-) |
LOC118966005 | msmp | coding | downstream | 362703 | 16230658 ~ 16232360 (-) |
LOC110531626 | LOC106608856 | coding | upstream | 75839 | 16827053 ~ 16828583 (-) |
LOC110531628 | cideb | coding | upstream | 135234 | 16886528 ~ 16891710 (-) |
LOC110531631 | dhrs4 | coding | upstream | 157544 | 16908838 ~ 16913948 (-) |
LOC110531634 | LOC106577795 | coding | upstream | 202479 | 16953773 ~ 16966223 (-) |
LOC110531636 | LOC106577791 | coding | upstream | 231416 | 16982710 ~ 17003093 (-) |
G776170 | NA | non-coding | downstream | 478 | 16594385 ~ 16594585 (-) |
G776166 | LOC106577817 | non-coding | downstream | 1458 | 16589278 ~ 16593605 (-) |
G775885 | NA | non-coding | downstream | 14826 | 16580020 ~ 16580237 (-) |
G775883 | NA | non-coding | downstream | 16908 | 16577892 ~ 16578155 (-) |
G775881 | NA | non-coding | downstream | 18437 | 16576068 ~ 16576626 (-) |
G776277 | NA | non-coding | upstream | 70221 | 16821515 ~ 16821874 (-) |
G776278 | NA | non-coding | upstream | 70988 | 16822282 ~ 16822629 (-) |
G776282 | NA | non-coding | upstream | 90979 | 16842273 ~ 16842505 (-) |
G776284 | NA | non-coding | upstream | 96114 | 16847408 ~ 16847682 (-) |
G776285 | LOC107661334 | non-coding | upstream | 97614 | 16848908 ~ 16849146 (-) |
G775532 | NA | other | downstream | 681769 | 15912836 ~ 15913294 (-) |
G775139 | NA | other | downstream | 731229 | 15862320 ~ 15863834 (-) |
LOC110531603 | groa | other | downstream | 807457 | 15781909 ~ 15787666 (-) |
G774954 | NA | other | downstream | 969143 | 15625202 ~ 15625920 (-) |
G774702 | LOC106577875 | other | downstream | 1233744 | 15352307 ~ 15361319 (-) |
G776294 | NA | other | upstream | 114173 | 16865467 ~ 16866034 (-) |
G776340 | LOC106577790 | other | upstream | 258718 | 17010012 ~ 17014685 (-) |
G776355 | NA | other | upstream | 274086 | 17025380 ~ 17025813 (-) |
G776461 | NA | other | upstream | 494140 | 17245434 ~ 17245797 (-) |