LOC110531624 (LOC106577801)


Basic Information

Item Value
gene id LOC110531624
gene name LOC106577801
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16828786 ~ 16839453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987456.1
ACCCCCACTGTACAGAAAAGGCACAGATACCCGAATTATAGAACTCCAAGAATAGCTTTACAGTAAAGACCCGCCCTCTTAAACATTCCTGCCTCGCATTTGTGACGGAAGCTTTCTGCTGAAATAAGAAATATTCATCATACATTTCATAAAGAACGATCAGAAGAATATATAACGTGTTCCTACCACCAATAACCAGAAGTAGAAATGCCTCGCATTGAGAATGACATCAAGTTGGACTTCAAGGATGTGCTCCTCCGTCCGAAACGTAGCACACTCAAGTCCCGTAGTGAGGTGGACCTGATGAGAAGTTACACCTTCAGGAACTCCAAGGGAAGCTACAGAGGGATCCCCATAGTTGCAGCCAACATGGACACCGTCGGCACCTTCGAGATGGCCCTGGCGTTATCCAAGtTCACTCTCTTCACTGCCATTCACAAACACTATTCAGTAGATGACTGGAAGGAGTTTGCAACAAAGAATCAAGAATGTGTACAGAGTGTGGCAGTCAGCACAGGGACAGGTGAAGGGGACTTTGACAGACTGGGTGAGATCCTAGCCGCTGTGCCTCAGCTGCAGTACATCTGTGTGGATGTGGCCAATGGCTACTCAGAGCACTTTGTCCACTTTGTCAAAGACGTGCGTCAGAAGTACCCGACACACACCATCATGGCAGGGAATGTGGTTACCGGGGAGATGGTGGAGGAGCTGATCCTCGCCGGCGCTGACATCATCAAAGTGGGCATCGGACCAGGGTCTGTGTGCACCACCCGTAAGAAGACCGGGGTGGGCTATCCCCAGCTGAGCGCTGTGATCGAGTGTGCAGACGCAGCCCACGGCCTGGGAGGACACATCATCTCTGATGGTGGGTGCACTTGCCCAGGTGACGTCTCCAAGGCTTTTGGCGCGGGGGCGGACTTTGTGATGCTGGGTGGAATGCTGGCCGGCCACTCAGAGAGCGGGGGCGAGGTCATCGAGAAGAACGGGAAGAAGTACAAGCTGTTCTACGGCATGAGCTCCGACACGGCCATGAAGAGACACGCCGGGGGCGTGGCCGAGTACAGGGCATCTGAGGGGAAGACGGTGGAGGTGGTCTACAAGGGTCCCGTGGACGTAACCATACGCGACGTCCTGGGTGGGGTCCGCTCCACCTGCACCTACGTGGGTGCAGGGAAGCTCAAGGAGCTCAGCCGCAGGACCACCTTCATCAGGGTCACCCAGCAGCTCAACACCGTCTTTGGGAACGATAACTAGGCGAGGTCCAGGCTGGTTCCTGGGCGTAACAGGGTCGGGGGGGGGTTTGTTTGCTGCCTGCCCCTGTCACATGGATGCTATTAcacatactgcacacacacacacacacacacacacacacacacacacacacacacaaagaaacatacacacacagaaacagacaataTTGTAACCATTGATAGTAAGAATCTGTCATTTGAGAAACGTAAACCTTGGATAAGTGTTCGGTTGCCAAATCAAAACCTTTTTAGGTGACACTATCAAAACAATCCCTTATCTAAGATGTTTATCTAAGGTTTGATATTTTAGACATATTTGGCTTTTTTCCCTGTAAATTACCAGAAATGGACATTTCTTTGATAATAAGTGAGCCGAGGATTGTTGTGTTACTTCGGGGTGTATTTTTTTGTGTCATCTTGCTCAATCATTCCCATTCAGCTCTGCAGGCCTTGAGTGCaggcttcctctctctgtccattatTATCTACCAAGTCctagaatctctctctctttctctctctctacgtccccTCTTTCTCCTAACACTTCTATGCACGTCACCGCCATGCTATATGAAAGCCATATGCAAAACAATGGATGTAGAGTATTTCACTTTATGAAGTATTTACTATATCAAGAGTACAGGTAAAGTTTATTCCAAAAACATAgattttattattttagatataTTCAATAGATGAAAATATTCCTTGTAATTACCAATATTGAAGATTTTTATGTTAAGATATTTCTGGTTATTTAACTTAATCCTTTTCAAACTcacttaaataaatatatattgacCTTGAATGATTTGCAAAAGTGTTAGATGATATCGTATTCCAGTCTTTTTCCCCCATAGGTTGTTCTCATGGGGACCAAATATTAAAGCGACGAGGGAAAAGATATAGAGTGAATCTACTGACAAACTGTTTCATGtactgtacagctacagtataaacTCAAGTCAGTCAAATTACACCCAGTATGTTGAGGGGAAACTGGTGGAATACAGAATGTGTTCAAAGTATGTTCTTAAAGTAGGCTAAAGTAGGCTGAGGGAGACAGGACAGCTTTGAGTGTTACCTTGACCTACATGTTGAGTTCCCCAATTTCTCAATATTTTATATAGTCAGAGACTAAAATGTCCATGCAATCAACATTTCACATGATTGTACTGTTACTTTGAAAATGTTGTTTCTGTCTATGCATTATTCTGTACTTGTAACTGACTAGTTTTCCATATGGCGGTATATTTACTTAACTTCACTGTGTTTTGGAAGATAATTCCATTTGATATGTATCTGGTTTTAGTCAAACGTGTTATGCAGGTTTTATGCCACTTTTCTTCAGTCTTCTCACTTCTGACCAATAAAGAGCATTCCTTATGA
>XM_036987457.1
TTTAACCTCTTTTGACGGTTTTAATGAAATATTTGCCAACCTTGCATTTTGACTGGACCATGGAGGCAGTGACAGCATGATAGCCCATATTGACTAGATCTTTCGAGTAGCTAGTTTATTAGGCCTTATATGAGCAGCTTTAGCTAAATGATCTGTAATTCATGTATTACTATTACATTATTACCGATTTGGATATTAACGATCAGAAGAATATATAACGTGTTCCTACCACCAATAACCAGAAGTAGAAATGCCTCGCATTGAGAATGACATCAAGTTGGACTTCAAGGATGTGCTCCTCCGTCCGAAACGTAGCACACTCAAGTCCCGTAGTGAGGTGGACCTGATGAGAAGTTACACCTTCAGGAACTCCAAGGGAAGCTACAGAGGGATCCCCATAGTTGCAGCCAACATGGACACCGTCGGCACCTTCGAGATGGCCCTGGCGTTATCCAAGtTCACTCTCTTCACTGCCATTCACAAACACTATTCAGTAGATGACTGGAAGGAGTTTGCAACAAAGAATCAAGAATGTGTACAGAGTGTGGCAGTCAGCACAGGGACAGGTGAAGGGGACTTTGACAGACTGGGTGAGATCCTAGCCGCTGTGCCTCAGCTGCAGTACATCTGTGTGGATGTGGCCAATGGCTACTCAGAGCACTTTGTCCACTTTGTCAAAGACGTGCGTCAGAAGTACCCGACACACACCATCATGGCAGGGAATGTGGTTACCGGGGAGATGGTGGAGGAGCTGATCCTCGCCGGCGCTGACATCATCAAAGTGGGCATCGGACCAGGGTCTGTGTGCACCACCCGTAAGAAGACCGGGGTGGGCTATCCCCAGCTGAGCGCTGTGATCGAGTGTGCAGACGCAGCCCACGGCCTGGGAGGACACATCATCTCTGATGGTGGGTGCACTTGCCCAGGTGACGTCTCCAAGGCTTTTGGCGCGGGGGCGGACTTTGTGATGCTGGGTGGAATGCTGGCCGGCCACTCAGAGAGCGGGGGCGAGGTCATCGAGAAGAACGGGAAGAAGTACAAGCTGTTCTACGGCATGAGCTCCGACACGGCCATGAAGAGACACGCCGGGGGCGTGGCCGAGTACAGGGCATCTGAGGGGAAGACGGTGGAGGTGGTCTACAAGGGTCCCGTGGACGTAACCATACGCGACGTCCTGGGTGGGGTCCGCTCCACCTGCACCTACGTGGGTGCAGGGAAGCTCAAGGAGCTCAGCCGCAGGACCACCTTCATCAGGGTCACCCAGCAGCTCAACACCGTCTTTGGGAACGATAACTAGGCGAGGTCCAGGCTGGTTCCTGGGCGTAACAGGGTCGGGGGGGGGTTTGTTTGCTGCCTGCCCCTGTCACATGGATGCTATTAcacatactgcacacacacacacacacacacacacacacacacacacacacacacaaagaaacatacacacacagaaacagacaataTTGTAACCATTGATAGTAAGAATCTGTCATTTGAGAAACGTAAACCTTGGATAAGTGTTCGGTTGCCAAATCAAAACCTTTTTAGGTGACACTATCAAAACAATCCCTTATCTAAGATGTTTATCTAAGGTTTGATATTTTAGACATATTTGGCTTTTTTCCCTGTAAATTACCAGAAATGGACATTTCTTTGATAATAAGTGAGCCGAGGATTGTTGTGTTACTTCGGGGTGTATTTTTTTGTGTCATCTTGCTCAATCATTCCCATTCAGCTCTGCAGGCCTTGAGTGCaggcttcctctctctgtccattatTATCTACCAAGTCctagaatctctctctctttctctctctctacgtccccTCTTTCTCCTAACACTTCTATGCACGTCACCGCCATGCTATATGAAAGCCATATGCAAAACAATGGATGTAGAGTATTTCACTTTATGAAGTATTTACTATATCAAGAGTACAGGTAAAGTTTATTCCAAAAACATAgattttattattttagatataTTCAATAGATGAAAATATTCCTTGTAATTACCAATATTGAAGATTTTTATGTTAAGATATTTCTGGTTATTTAACTTAATCCTTTTCAAACTcacttaaataaatatatattgacCTTGAATGATTTGCAAAAGTGTTAGATGATATCGTATTCCAGTCTTTTTCCCCCATAGGTTGTTCTCATGGGGACCAAATATTAAAGCGACGAGGGAAAAGATATAGAGTGAATCTACTGACAAACTGTTTCATGtactgtacagctacagtataaacTCAAGTCAGTCAAATTACACCCAGTATGTTGAGGGGAAACTGGTGGAATACAGAATGTGTTCAAAGTATGTTCTTAAAGTAGGCTAAAGTAGGCTGAGGGAGACAGGACAGCTTTGAGTGTTACCTTGACCTACATGTTGAGTTCCCCAATTTCTCAATATTTTATATAGTCAGAGACTAAAATGTCCATGCAATCAACATTTCACATGATTGTACTGTTACTTTGAAAATGTTGTTTCTGTCTATGCATTATTCTGTACTTGTAACTGACTAGTTTTCCATATGGCGGTATATTTACTTAACTTCACTGTGTTTTGGAAGATAATTCCATTTGATATGTATCTGGTTTTAGTCAAACGTGTTATGCAGGTTTTATGCCACTTTTCTTCAGTCTTCTCACTTCTGACCAATAAAGAGCATTCCTTATGA

Function

NR:

description
GMP reductase 2-like

GO: NA

KEGG:

id description
K00364 E1.7.1.7, guaC; GMP reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987456.1 False 2648 mRNA 0.45 10 16828786 16839453
XM_036987457.1 True 2691 mRNA 0.44 10 16829021 16839453

Neighbor

gene id symbol gene type direction distance location
LOC110531623 LOC106577803 coding upstream 7444 16777534 ~ 16821342 (+)
LOC110531622 LOC106577817 coding upstream 235181 16589215 ~ 16593605 (+)
LOC110531621 LOC106577824 coding upstream 240401 16582409 ~ 16588385 (+)
LOC110531620 LOC106577818 coding upstream 355386 16454905 ~ 16473400 (+)
LOC110533002 LOC106577819 coding upstream 384772 16440652 ~ 16444014 (+)
LOC110531630 NA coding downstream 52890 16892343 ~ 16907677 (+)
LOC110531629 LOC106577796 coding downstream 74617 16914070 ~ 16925975 (+)
acin1b LOC106577794 coding downstream 86759 16926212 ~ 16953584 (+)
LOC118966195 NA coding downstream 88207 16927660 ~ 16927776 (+)
LOC118966194 NA coding downstream 89293 16928746 ~ 16928864 (+)
G776017 NA non-coding upstream 4441 16824138 ~ 16824345 (+)
G776016 NA non-coding upstream 5713 16822865 ~ 16823073 (+)
G776015 NA non-coding upstream 5954 16822631 ~ 16822832 (+)
G776009 NA non-coding upstream 48681 16779710 ~ 16780105 (+)
G775953 LOC106674859 non-coding upstream 134636 16693396 ~ 16694150 (+)
G776020 NA non-coding downstream 4171 16843624 ~ 16843838 (+)
G776021 NA non-coding downstream 5276 16844729 ~ 16845006 (+)
G776022 NA non-coding downstream 6485 16845938 ~ 16846148 (+)
G776023 NA non-coding downstream 12190 16851643 ~ 16851939 (+)
G776024 NA non-coding downstream 12546 16851999 ~ 16852218 (+)
G775945 NA other upstream 145295 16683194 ~ 16683491 (+)
LOC110532939 NA other upstream 485976 16315734 ~ 16342810 (+)
LOC110532936 LOC106577844 other upstream 577922 16233342 ~ 16250864 (+)
G775306 NA other upstream 641336 16186276 ~ 16187450 (+)
G775142 NA other upstream 962078 15866089 ~ 15866708 (+)
LOC110532942 LOC106577806 other downstream 457602 17292470 ~ 17305629 (+)
G776487 NA other downstream 541172 17380625 ~ 17394121 (+)
G776818 LOC106600668 other downstream 818744 17658197 ~ 17659145 (+)
G777111 NA other downstream 1162436 18001889 ~ 18002182 (+)
G777113 NA other downstream 1163814 18003267 ~ 18005668 (+)

Expression


Co-expression Network