LOC110531628 (cideb)


Basic Information

Item Value
gene id LOC110531628
gene name cideb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 16886528 ~ 16891710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614929.2
ctcacacacgcatgtacacacacagacagagaacttTGCCCTATGTGTCTTGTATCTGATTCATCAGGGCAAAGTCTGTCCTAAAGAATTAGCTGGGTCAGACACATTCAGAATCAGAGTCGACATAGCACCAACGCTACCAAAACAACACAAGGAAAAATAggaggtaaagaagagagagaaggaaagaaagagagtgggatATGGAGTCAACATCATCATTAATAAAGTCTGTGACGAGGCGGGTGTGGTCGTTGGCCCCGGCCCCCCAGAGACCATTCAGGGTGTGTTCCCATGACAGGGGCACCAGGAAGGGTGTCACAGCAGCTACCCtggaggagctgagagagaggGTGTGTCAGGCCCTGATGCTGTGCCTGTCCAGTCTGGCTGTAGTGCTAGTGTGTGAGGAGGACGGGACAGTGGTAGACTCTGAAGACTTCCTGATGTATCTGCCCGACAACACTGTCCTCATGGCCCTGGAACCTGGACAGACATGGAAACCTCCTCCGGGTGCAGTGCTCTCCAAAGGCCAGGACCCTAACCAGTCGCGGACAGGAAAAGACATAGCCCGGGTGACCTTTGACCTGTACCGGCAGAACCCCAAGGACGTGTTTGGCTCCCTGAATGTGAAGGGCACCTTCTCAGGCCGGTACTCCGTCAGCGCTGACTTCCAATGTCTGGGGCCCAAAAAAGTCCTCAGagaggcCCTCCGCATggcctccaccctcctccagatGGCAGGTCACATGTTGATCACCTCAGCCAATCTGATCAAGCGGATAATCGAGGGAGCAGAGTTCTGGCAGCCTCAGAGGGTGGAGGCCACAGAGTACTGGAACTAAGGCAGGACTGGGACCGACCGCTCTCTAATGACCAAATCAATCCTAACTTGAGTGTATGTTTATGATTGAGTTATGCAAGGTTGTGTGTTGTGATCAAACAGGAGGATAATTACACGTTGTTTAGATTTTTTATAAGGTTAGTTGTAAAATAGGACTTATCTTTCTCTAACAATTCTGAGAATGTACCACGAAGTCCACAAATAGAAGCAATGAATTTTTAAAAACTGAGTATGCATTATTTGTCACTTTCTTTGTGGTTTCTAATCACTGTCTCATCTTGTGTTTAATGAATGCTTTCAGTTGCTACATCCACTCAGTCCACTGTCAGAGACACCCACTTCCAGAACAAGGAGAAACAGTTCTGTTCATTCATAGAAGGGTATGAGGAAACCTGACCAGCACTTGAGGAACCAATACGATTTAACATGAGCCTTTTGTTGCTGTACCTTTAATTAGGCTATATATAAGTTAATTACTTTCTTACTCATGACCACACAAGATCTGCCAAAAGGCAAGGACACAGACTGCATAAGCACAGTATGAGGTCAGATAGTGAATATACTGAGTAACATTACCAACAACATTATCAAATATTAAACTGGTACCAGCCGGTTACTCAACCCTCCACCTTAGAGGCtgttgccctatatacatagacatggaatcactggtcacttaaaTGATggaacactgctaactttaataatgtttacatactgctttactcatttttactcatttcatatgtatttcATATGTATTCTATTCTAATGTATTTTAATCAATGCCACTCCGatattgctcgtcctaatatttatatatttcctaattccattcttttacttttagatgtgtctattgttgtgaattgttagatattactgcactgttggagctaagaacacaagcatttcgctacacccgccataacatcttctaaatatgtgtatgtgaccaaataaaatttgatttgatttgttcagtTCTGTTTAAA

Function

symbol description
cideb Predicted to be involved in regulation of apoptotic process. Predicted to act upstream of or within apoptotic process. Orthologous to human CIDEB (cell death inducing DFFA like effector b).

NR:

description
cell death activator CIDE-B

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0005622 intracellular anatomical structure cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614929.2 True 1839 mRNA 0.44 5 16886528 16891710

Neighbor

gene id symbol gene type direction distance location
LOC110531626 LOC106608856 coding downstream 57945 16827053 ~ 16828583 (-)
LOC110532940 LOC106608858 coding downstream 135234 16595063 ~ 16751294 (-)
LOC118966166 NA coding downstream 304723 16580259 ~ 16581805 (-)
LOC118966165 NA coding downstream 312636 16555795 ~ 16573892 (-)
LOC110531619 LOC100380775 coding downstream 446380 16427088 ~ 16440148 (-)
LOC110531631 dhrs4 coding upstream 17128 16908838 ~ 16913948 (-)
LOC110531634 LOC106577795 coding upstream 62063 16953773 ~ 16966223 (-)
LOC110531636 LOC106577791 coding upstream 91000 16982710 ~ 17003093 (-)
LOC110531638 LOC106577815 coding upstream 136892 17028602 ~ 17043723 (-)
LOC110532941 LOC106577784 coding upstream 159039 17050749 ~ 17064251 (-)
G776295 NA non-coding downstream 19848 16866424 ~ 16866680 (-)
G776293 NA non-coding downstream 23853 16862370 ~ 16862675 (-)
G776288 NA non-coding downstream 32464 16853844 ~ 16854064 (-)
G776246 NA non-coding downstream 33900 16852308 ~ 16852628 (-)
G776286 NA non-coding downstream 35918 16850302 ~ 16850610 (-)
G776307 NA non-coding upstream 12711 16904421 ~ 16904688 (-)
G776310 NA non-coding upstream 31841 16923551 ~ 16925938 (-)
G776247 NA non-coding upstream 60696 16952406 ~ 16953579 (-)
G776329 NA non-coding upstream 79324 16971034 ~ 16971531 (-)
G776346 NA non-coding upstream 112086 17003796 ~ 17004079 (-)
G776294 NA other downstream 20494 16865467 ~ 16866034 (-)
G775532 NA other downstream 973234 15912836 ~ 15913294 (-)
G775139 NA other downstream 1022694 15862320 ~ 15863834 (-)
LOC110531603 groa other downstream 1098922 15781909 ~ 15787666 (-)
G776340 LOC106577790 other upstream 118302 17010012 ~ 17014685 (-)
G776355 NA other upstream 133670 17025380 ~ 17025813 (-)
G776461 NA other upstream 353724 17245434 ~ 17245797 (-)
G776652 NA other upstream 427905 17319615 ~ 17320373 (-)
G776642 NA other upstream 453768 17345478 ~ 17354347 (-)

Expression


Co-expression Network