LOC110531640 (LOC106577784)



Basic Information


Item Value
gene id LOC110531640
gene name LOC106577784
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 17076930 ~ 17080885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005053198.1
tctctccctctaggcaCCCCCAGACCCAGAGCACCAACCAGGACCCCCAACAGGACCAAGGATCTACCCAGGGTCAGGCTCCTGATGCTGGGTATACATGTCTGCAGCATGGTGGTGTTCACGTCTACGATACGATCAATCCCTCAGACAACTATAATAatgATGCTGCTGTTGGACCAAGTCATTTGACATACGCCCAGATTCAACTCACAAAGTTGGACAAGAAAAAGAAGAAAAGCCAGCTGATCCAAAAGAAAGTCCAGTCTACTCTGAGGTGAAGACAGGGAAAGCCACAACTGGACCTGTTGATGTGACCTATGCTGAGGTTGTCCTCCAAAAGAAGACCAAAGCCAAGAAGAAGAGAAACAACCCCACCTGAGACAGATTCAGTCTATTCTCAACTGAAGCCAGgtccttgagggagatggagg
>TU884689
AGGTTCCTGTTTTCACAGAATATTCTTgcaCCCCCAGACCCAGAGCACCAACCAGGACCCCCAACAGGACCAAGGATCTACCCAGGGTCAGGCTCCTGATGCTGGGTATACATGTCTGCAGCATGGTGGTGTTCACGTCTACGATACGATCAATCCCTCAGACAACTATAATAatgATGCTGCTGTTGGACCAAGTCATTTGACATACGCCCAGATTCAACTCACAAAGTTGGACAAGAAAAAGAAGGAAAAGCCAGCTGATCCAAAAGAAAGTCCAGTCTACTCTGAGGTGAAGACAGGGAAAGCCACAACTGGACCTGTTGATGTGACCTATGCTGAGGTTGTCCTCCAAAAGAAGACCAAAGCCAAGAAGAAGAGAAACAACCCCACCTGAGACAGATTCAGTCTATTCTCAACTGAAGCCAGG

Function


NR:

description
low affinity immunoglobulin gamma Fc region receptor II-c-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005053198.1 False 431 mRNA 0.49 7 17076930 17080792
TU884689 True 427 lncRNA 0.48 7 17079199 17080885

Neighbor


gene id symbol gene type direction distance location
LOC110532941 LOC106577784 coding downstream 12679 17050749 ~ 17064251 (-)
LOC110531638 LOC106577815 coding downstream 33207 17028602 ~ 17043723 (-)
LOC110531636 LOC106577791 coding downstream 73837 16982710 ~ 17003093 (-)
LOC110531634 LOC106577795 coding downstream 110707 16953773 ~ 16966223 (-)
LOC110531631 dhrs4 coding downstream 162982 16908838 ~ 16913948 (-)
LOC110531642 ylat1 coding upstream 225498 17306290 ~ 17317711 (-)
LOC110531643 LOC106577781 coding upstream 240639 17321431 ~ 17327614 (-)
LOC110531645 LOC106577780 coding upstream 249542 17330334 ~ 17339133 (-)
tm4sf5 tm4sf5 coding upstream 284191 17364983 ~ 17373648 (-)
tmem88b LOC106577776 coding upstream 309298 17390090 ~ 17397228 (-)
G776377 NA non-coding downstream 26875 17049787 ~ 17050055 (-)
G776372 NA non-coding downstream 31460 17045264 ~ 17045470 (-)
G776371 NA non-coding downstream 33860 17041977 ~ 17043070 (-)
G776370 NA non-coding downstream 35571 17041080 ~ 17041359 (-)
G776353 NA non-coding downstream 53948 17022644 ~ 17022982 (-)
G776393 NA non-coding upstream 34793 17115585 ~ 17115820 (-)
G776396 NA non-coding upstream 47805 17128597 ~ 17129233 (-)
G776421 NA non-coding upstream 113390 17194182 ~ 17194503 (-)
G776424 NA non-coding upstream 118082 17198874 ~ 17199142 (-)
G776446 NA non-coding upstream 142997 17223789 ~ 17223993 (-)
G776355 NA other downstream 51117 17025380 ~ 17025813 (-)
G776340 LOC106577790 other downstream 62245 17010012 ~ 17014685 (-)
G776294 NA other downstream 210896 16865467 ~ 16866034 (-)
LOC110531626 LOC106608856 other downstream 248369 16827053 ~ 16828583 (-)
G775532 NA other downstream 1163636 15912836 ~ 15913294 (-)
G776461 NA other upstream 164642 17245434 ~ 17245797 (-)
G776652 NA other upstream 238823 17319615 ~ 17320373 (-)
G776642 NA other upstream 264686 17345478 ~ 17354347 (-)
LOC110532943 LOC106577805 other upstream 336855 17402378 ~ 17547902 (-)
G776714 NA other upstream 377885 17458677 ~ 17463822 (-)

Expression



Co-expression Network