Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110532942 |
| gene name | LOC106577806 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 17292470 ~ 17305629 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mitochondrial inner membrane protein OXA1L-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989266.1 | False | 1076 | mRNA | 0.50 | 10 | 17292470 | 17305629 |
| TU884850 | False | 1117 | TUCP | 0.52 | 8 | 17297055 | 17305515 |
| TU884851 | False | 1069 | TUCP | 0.52 | 9 | 17297055 | 17305515 |
| TU884849 | True | 726 | lncRNA | 0.51 | 3 | 17304112 | 17305515 |
17,292,000
17,294,000
17,296,000
17,298,000
17,300,000
17,302,000
17,304,000
17,306,000
17,306,000
17,308,000
17,310,000
17,312,000
17,314,000
17,316,000
17,318,000
17,320,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966009 | NA | coding | upstream | 23436 | 17266030 ~ 17269034 (+) |
| LOC118966167 | NA | coding | upstream | 27053 | 17254266 ~ 17265417 (+) |
| LOC118966176 | NA | coding | upstream | 49920 | 17240870 ~ 17242550 (+) |
| LOC118966008 | NA | coding | upstream | 70070 | 17202617 ~ 17222400 (+) |
| LOC118966007 | NA | coding | upstream | 106751 | 17144013 ~ 17185719 (+) |
| LOC110531644 | mettl3 | coding | downstream | 33643 | 17339272 ~ 17346251 (+) |
| LOC110531656 | pop7 | coding | downstream | 882109 | 18187738 ~ 18190442 (+) |
| LOC110531658 | LOC106577765 | coding | downstream | 945303 | 18250932 ~ 18256403 (+) |
| LOC110531660 | LOC106608810 | coding | downstream | 995739 | 18301368 ~ 18320759 (+) |
| LOC110531663 | LOC106577697 | coding | downstream | 1335026 | 18640655 ~ 18648675 (+) |
| G776496 | NA | non-coding | upstream | 15829 | 17276440 ~ 17276641 (+) |
| G776459 | NA | non-coding | upstream | 48030 | 17244233 ~ 17244440 (+) |
| G776165 | NA | non-coding | upstream | 108789 | 17183031 ~ 17183681 (+) |
| G776164 | NA | non-coding | upstream | 110148 | 17182057 ~ 17182322 (+) |
| G776508 | ylat1 | non-coding | downstream | 152 | 17305781 ~ 17315579 (+) |
| G776516 | NA | non-coding | downstream | 14981 | 17320610 ~ 17321790 (+) |
| G776519 | NA | non-coding | downstream | 23334 | 17328963 ~ 17329323 (+) |
| G776483 | NA | non-coding | downstream | 24710 | 17330339 ~ 17330789 (+) |
| G776478 | NA | non-coding | downstream | 48459 | 17354088 ~ 17354428 (+) |
| G775945 | NA | other | upstream | 608979 | 16683194 ~ 16683491 (+) |
| LOC110532939 | NA | other | upstream | 949660 | 16315734 ~ 16342810 (+) |
| LOC110532936 | LOC106577844 | other | upstream | 1041606 | 16233342 ~ 16250864 (+) |
| G775306 | NA | other | upstream | 1105020 | 16186276 ~ 16187450 (+) |
| G775142 | NA | other | upstream | 1425762 | 15866089 ~ 15866708 (+) |
| G776487 | NA | other | downstream | 74996 | 17380625 ~ 17394121 (+) |
| G776818 | LOC106600668 | other | downstream | 352568 | 17658197 ~ 17659145 (+) |
| G777111 | NA | other | downstream | 696260 | 18001889 ~ 18002182 (+) |
| G777113 | NA | other | downstream | 697638 | 18003267 ~ 18005668 (+) |
| G777165 | NA | other | downstream | 802390 | 18108019 ~ 18108482 (+) |
