LOC110531665 (LOC106577695)


Basic Information

Item Value
gene id LOC110531665
gene name LOC106577695
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 18718365 ~ 18833482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614984.2
gtcacacacacactgtctctccacacgtgcgcacccacacacacacacacacacacacgcaatgaaACTGAGAGTTGCTTTGATCGGGAGatcaagagacacacacacattctctctttctctcacacacagagggagtAAGGAAGGCATCCAGGCTGGTGCCTTTTGAAGcagcagtgaaagagagaggagagaggacagggggaatcTAAGGCACCGGACCACTGTCACCTACCGACCAGCCCCCCGCCGATGATCCACGGCTACAGCCACTGCACAGTGAAAAGGGGGTTATGCCAGGAGAGCTTGAAAGGAAGGAACGATCCAGCTCTCCGTCTGTCCGTCCACCCGTCATCCTCATTCCTCTTTTTTTTCAGAGCCGATATCTCAGGTCGGACGGTCCCGTTTTgaattctttctttttctcttgtaattttagtttttttctcttttttgatGGAGGGATGTGAAGGATCAGGTGAAGAAAGGAGGAGCTGCATTGTGGATGTCTGAAAGCTTGTGTCATTTATAGTTTTTTGGGTTTGTTCTTATTTCAACGATCACTTTATTTCAACGATCACCTCCTGACTGAATTGAAGCGTGTGTGTGAGCAGCAGGACTGGAGGCTATAAGGACTTTGAGACTTATCTCTGTTTTGATATGATTCGGTCGTCAGGAAAATTCTTTCCTGTCCTGAAGGAGCTGTGTCAAAGTTAGCTGGCGCTGCAGGGAGAGGAAGGGGCCGTGGGGAGGGCCGTGGCCCAGGACAAAGCACCCAACCTGGGACGCACACAGAGGGACACTGGCGTAGTGGCTCTTCTCACCCACTGATAACTGTGTACCTGAAAATGACACCATGAGTTTTATATCTTCCTGCTGCCATTGTGACGGAGGGACAGTGACAACAACGTAAACAACAACAAGTGCAATAGCAGGCAACAGCCTAAAGGAGAACAACAACAGCTAAACCACCAGTGACTGGAACAACACATTGCATCGAACCAAACCTCAACTAGTCAACATCCCACAACTTTGGGTGAGCCTTTGACAAGGACTCCACCACTCTCACTGCCGTGGTGGtctcctccctccattcaccAGCAAGAATCCCCTAGTGACCCCCACTCTGCTACTATATTCCTCCAGATATTGTTGACATAACATATTGACATTTCTATGTCAATCTAGGAAAGTTTTCTCAAGGATTCTGGGTAATCTCCTCCGGCGGTGCGCCGTCGCCCTGGGTGAAAGGGCAGGGGGGCGGCCCACGGTTCCCCCCGACCACAACCGGGTGAAAAACAGGAGCGGGCGGCAATATGGCGGCTCTCGCCAGCTCATTGATCCGCCAGCGGCGGGAGGTGAAGGACCCCCAGGCCAACCGGCAGGTGGCCAACAAGAGGAAGCCGTGCCCCAAGGCCAACAAGTCCCTGTGCCAGAAACAAATATTATTACTCATATCAAAAGTCCGACTATGTGGCAATCGAGGGCGAAAGTTAGAAAAAAAACCGGAGCCCCAACTGAAAGGTATCGTCACAAGACTCTACAACCGGCATGGCTTCTACCTCCAGATGCTTCCGGATGGCACCATGGACGGCACAAAGGACGAAAGCAGCTCCTTctTGCAGTTCAACTTGATTCCTGTGGGACTGAGGATAGTAGCCATCCAGAGCACTAAGACAGGGCTCTACATTGGGATGAACAGCGATGGATACCTCTACACCTCAGAATACTTCACCCCAGAGTGCAAGTTCAAAGAGAGTGTGTTTGAGAACTACTACGTGACGTACTCGTCAATCCTGTACCGGCAGACCCAGTCGGGCAGGGCCTGGTACATCGGCATCAACCGGGACGGACAGGTCATGAAGGGCAACAGGGTCAAGAAGACCAAAGGGGCGGCCCACTTCCTGCCCAAACTCATAGAAGTGGCAATGTACAGGGAGCCTTCGCTGCATGAAGTGGTGGTGGTCGCCGAGCTGAGTCCGCCCAGAAAAACGGCCAAGACCTCCGATTCGCCCGTGCTGCAGAACGGCAAGAAAGACCCGCCCTCCAAAACCAAAACTTCCTAGCGCATGGAGAAGACAGGGGGCAATGGGCACTGACTGGCACTGGCACTGACTGGCGAACAAAGTCTTCCTGTTTTTATTACAAAGGGGGGTCACCGTCAAATGTTTCCCCCTTGCCCCACCGAGCAGCGCGTAGAGGGGGCCGTATTGTTCTATATTCCCACAGGTTTCATCCTAATGTAAGGTTGACCAAGGATGTGAAATTTCACTCTATTccgtttatagtgcactacttctgaccaaagCTTGcacaggactctggtcaaaagtagtgcactataaagggaatttgGGTGCCACATGGGACGTGTCCCCAAACACCCTGTTGTTCTCTTCACATCTGTTACCAGGTGTTCTCTGTCCGTCAGCACCTTTGTGACCATAGCGATCCCCTCCATACTTAAGCAATGATGTGGAGgttctcttttctttttttctttttctcgTTCACCTTTGGTGAAATTTGATTAGTTTGTGACACGGAGTCAATTTTCCACTCGGCAGCACAAGAGAAACTTCCTCGTTCTTCTCTAGGGCTGTTAACAGCAGCTCTCTAATCAAAATCTCCCATACCtctttaaagagagagaggaacctccccactgcactgcattgaactacacacatacacacacacacacacacacccttctgagagagagtggtgattGTGTGCGGGTCAGGGCTTAAGGAATGGTAATGACACCATCAGTGAGATGGTGTTGGTCTCTGAGAATCTGTTTGCAATACACCCTCCTATCACTACAACACAATGTATCATTTCTCTAGCTCATGCCTTCAGTCAGGGAGATACATACTGTTGGGCCCACAGCAGGtcagtggcaccttaattggggtggacgggctcgtggtaatggctggagcggaatgagtggaatggtagcaaatgtgttttcatgtgtttgatgccattccatttgctccgttctgggcattattatgagccatcctcccctcagcagcctcctgtgtcgTAGGCCTATTGTggttttgtttgagtgtttttgtaGTTGTGTATGTTATTGCAGGACAGTTGTGGTTCTTTCCTGAGGGCTACAGCCTCTTTATGGAATTATCAGgccaaacagactggcacccaggctaataACCTCCTGGTTCCATGTTTATTTCTGATGTTGATCTCAACTTCAGATGTAATAACCAACTAGTATGCACTGAACCTCATCAACACATGATCCAGTATCCTGAGCAGATCGTAGTTATTACGAGCCTCCTTTACTGCACGCTACACCATCATGTCTGGTCATTGCCCACAGCAACGTCATTGTTGTACAGTATGAaatctgttgttgttttgttgacgttgacaGCGCCAGTTACAGGTTGCTAATTCTCGATGGCTGCATCCGAAAAGGTACCgaccagagctctggtcaaaggtcACGCAGTACAGGGAATACGGTGCCTGTCGTTGACATGCGTCTACAAGACTatgatgtttttattttattttaccgtGATGTGGTTACAGGAGGGATTTGAGTTCCCATCCCAAATGGAATGttaggtcacactttatttggagaATCCGGATTTATGGTCATACtgtcaacaaactatctgttgatgaGCAACTACTTGGTAAGGTTACAATTTGGGTTAGAATAAGGGTACGGTTAGGGTTtaagttaagtttagggttaggataagggtaagggtaaggtttagggtttaagttaagtttagggttaggataagggtaagggtaaggttt

Function

NR:

description
fibroblast growth factor 11-like

GO:

id name namespace
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K22413 FGF11_12_13, FHF3_1_2; fibroblast growth factor 11/12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614984.2 True 3819 mRNA 0.49 6 18718365 18833482

Neighbor

gene id symbol gene type direction distance location
LOC110531664 LOC106577696 coding upstream 45047 18656177 ~ 18673318 (+)
LOC110531663 LOC106577697 coding upstream 69690 18640655 ~ 18648675 (+)
LOC110531660 LOC106608810 coding upstream 397606 18301368 ~ 18320759 (+)
LOC110531658 LOC106577765 coding upstream 461962 18250932 ~ 18256403 (+)
LOC110531656 pop7 coding upstream 527923 18187738 ~ 18190442 (+)
LOC118966177 NA coding downstream 11794 18845276 ~ 18846593 (+)
chrnb1l LOC106577752 coding downstream 78268 18911750 ~ 18928236 (+)
LOC110531666 LOC106577694 coding downstream 105113 18938595 ~ 18950268 (+)
LOC110531667 NA coding downstream 127855 18961337 ~ 18963380 (+)
LOC110531669 LOC106577692 coding downstream 143512 18976994 ~ 18982679 (+)
G777474 NA non-coding upstream 84645 18633270 ~ 18633720 (+)
G777471 NA non-coding upstream 87003 18631154 ~ 18631362 (+)
G777469 NA non-coding upstream 90088 18628074 ~ 18628277 (+)
G777464 NA non-coding upstream 97743 18620385 ~ 18620622 (+)
G777455 NA non-coding upstream 108762 18609202 ~ 18609603 (+)
G777643 NA non-coding downstream 41611 18875093 ~ 18875295 (+)
G777658 NA non-coding downstream 75135 18908617 ~ 18911505 (+)
G777749 NA non-coding downstream 217330 19050812 ~ 19051046 (+)
G777396 NA other upstream 218347 18499614 ~ 18500018 (+)
G777165 NA other upstream 609883 18108019 ~ 18108482 (+)
G777113 NA other upstream 712697 18003267 ~ 18005668 (+)
G777111 NA other upstream 716183 18001889 ~ 18002182 (+)
LOC110531694 LOC106577663 other downstream 984206 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 1042786 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1176034 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 1206129 20039611 ~ 20040283 (+)
LOC110531706 naa38 other downstream 1245954 20079382 ~ 20082084 (+)

Expression


Co-expression Network