si:dkey-165a24.9 (LOC106577691)


Basic Information

Item Value
gene id si:dkey-165a24.9
gene name LOC106577691
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19007551 ~ 19009317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614991.2
TTGAGGGTATCCCCCCTCACCCAGAGACTGTCAGAGACCATGTCCAACAGCAATGACAGCTGCAACCTCCCCCTGAACACCGACACACTTGGTCTCACCTACATCTACAGCCTGGCCTTCTCACTGGGTCTCCCTTGCAACCTGCTGTCTCTCTGGGGACTGTACCAACTGGGCCGGTCCGGCGGGGGTGGCTGTCAGCTGGTCTATATCCTCAACCTGCtgctctctgacctcctccagctcctcaccctccctctctggatcctCTATCTCCAGGGGGCGCACCGCTGGCCCTACGGCCGCCCCGCCTGCGAGTTCGTGGGCTATGTCTTCTACGTCAACGTCTACGCTAGCGTGGTGTTCCTCTGTATCATCGCATTGGACCGTTGCCTGGCGATAGTACACCCGTTGAGTAGTCGTGGCGTTCGGACCGTGCGGGTGGCGGCGGTATTGGGGGTGGCGGTCTGGACACTGACCTTTCTGTTCTGTTTGGGCGGGCTTCTTCCGTCAGTGTTTGATGCGGAGAGGCTGTTGTGTCTGGAGCAGTACCCCGTCAGCCTCAGATATGCTCACTTTAAGATTGCTACGGTTGTCATGGGGTTCCTGCTGCCCTGTGGTATACTGGGCTACACTTCCGCCCGCATAGGAGTGACTCTCCATCACTCGCCATCCGTCTCCGACCAGGGTCGTCACAAAATCACAGGCATCCTCATCGTCATCACCGTCATCTTCATCGTCGTCTTTGGACCCTACCACCTCATCGGGGGGTACCGTTTCGTCTCCTTGCTCCTCACAGATGACCCCTGTGAGTTGGAGCGGTCCATTTTCCTGTGTTACCGGCTGTGCTATGGCCTGACGAGCCTCAACACCCTGCTGGACCCTCTGTTCTACATCTTCCTGTGTCATGACGCCCGTCTGGAGCTCCGCAGGTCACTGACGCCCTGTCTGGGACAGGGGCACACAGCCCCCAAACAAGTCAGACTAAGTCTCAGAGGGAATCCTGATCAGAGTGACAGTGTGTAGAGAGACTGGATTGGACACGTTTTTGAATTTCCTGTTCCTTTGATTCTGAGGAAGAAGAATCTGGATAAACTCTATTATGTTACCCGTTTCTTGTTCTTTGATGGTCTTGAAGTCGAGAGGAGAGGACACATTTTGTGGCGACACCAGCCATACACTACAATGCAGTGTTTTCATAGACTTGCTCAAGGAACTGACTCCACTGGTTTGGCTGCTGAGAATTGGTGATGGGAAAAAAGCAGCGATTGTGCCACCTAGTGGGGAGAGCATGTATGCTGTTGGCTGAAATTGGAAAGGGTACTCCATCTGCTTCACCTTTCTGCTGACAGTCATCTCTAACTTATAATGCACTGCAATAGCTGCCTCAGTTTATACAGCCATATGAATGACTATCCGTGGATATCAACAATAATGTCAAATGTGTCTTGATTACTTGCTTATTGCAGTAAATAAAGTCattttaaat

Function

NR:

description
probable G-protein coupled receptor 132

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614991.2 True 1486 mRNA 0.53 2 19007551 19009317

Neighbor

gene id symbol gene type direction distance location
ugt5g1 LOC106577690 coding upstream 209 18995065 ~ 19007342 (+)
LOC110531668 LOC106577692 coding upstream 19823 18983283 ~ 18987728 (+)
LOC110531669 LOC106577692 coding upstream 24872 18976994 ~ 18982679 (+)
LOC110531667 NA coding upstream 44173 18961337 ~ 18963380 (+)
LOC110531666 LOC106577694 coding upstream 57283 18938595 ~ 18950268 (+)
LOC110533003 LOC106577683 coding downstream 51851 19061168 ~ 19062311 (+)
LOC110532947 LOC106577684 coding downstream 61526 19070843 ~ 19074558 (+)
rbm4b LOC106577685 coding downstream 78346 19087663 ~ 19105988 (+)
LOC110531675 NA coding downstream 83751 19093068 ~ 19107907 (+)
LOC118966168 LOC106577681 coding downstream 122562 19131879 ~ 19144863 (+)
G777658 NA non-coding upstream 96046 18908617 ~ 18911505 (+)
G777643 NA non-coding upstream 132256 18875093 ~ 18875295 (+)
LOC118966177 NA non-coding upstream 161281 18845276 ~ 18846593 (+)
G777603 NA non-coding upstream 193596 18813725 ~ 18813955 (+)
G777749 NA non-coding downstream 41495 19050812 ~ 19051046 (+)
G777752 NA non-coding downstream 46717 19056034 ~ 19056422 (+)
G777754 NA non-coding downstream 53917 19063234 ~ 19063457 (+)
G777755 NA non-coding downstream 54785 19064102 ~ 19064330 (+)
G777757 NA non-coding downstream 55809 19065126 ~ 19065349 (+)
LOC110531664 LOC106577696 other upstream 349977 18656177 ~ 18673318 (+)
G777396 NA other upstream 507533 18499614 ~ 18500018 (+)
G777165 NA other upstream 899069 18108019 ~ 18108482 (+)
G777113 NA other upstream 1001883 18003267 ~ 18005668 (+)
G777111 NA other upstream 1005369 18001889 ~ 18002182 (+)
LOC110531694 LOC106577663 other downstream 808371 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 866951 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 1000199 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 1030294 20039611 ~ 20040283 (+)
LOC110531706 naa38 other downstream 1070119 20079382 ~ 20082084 (+)

Expression


Co-expression Network