Item | Value |
---|---|
gene id | nitr2 |
gene name | nitr2 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048573.1 |
NCBI id | CM023227.2 |
chromosome length | 79455637 |
location | 19119500 ~ 19124018 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
novel immune-type receptor 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
NM_001124299.1 | True | 1154 | mRNA | 0.46 | 6 | 19119500 | 19124018 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
tifa | LOC106577687 | coding | downstream | 33501 | 19084032 ~ 19085999 (-) |
LOC118966012 | NA | coding | downstream | 49288 | 19066691 ~ 19070212 (-) |
LOC110531672 | LOC106577688 | coding | downstream | 72027 | 19017546 ~ 19047473 (-) |
LOC110531673 | LOC106577689 | coding | downstream | 102096 | 19010092 ~ 19017404 (-) |
LOC110532946 | NA | coding | downstream | 129856 | 18987822 ~ 18989644 (-) |
LOC110532949 | nitr3 | coding | upstream | 24084 | 19148102 ~ 19156589 (-) |
nitr3 | nitr3 | coding | upstream | 48617 | 19172635 ~ 19174378 (-) |
LOC110512425 | LOC106577746 | coding | upstream | 54027 | 19178045 ~ 19179798 (-) |
LOC110531690 | NA | coding | upstream | 72250 | 19196202 ~ 19197333 (-) |
LOC110531677 | LOC106577725 | coding | upstream | 77935 | 19201953 ~ 19204332 (-) |
G778697 | NA | non-coding | downstream | 6573 | 19112661 ~ 19112927 (-) |
G778696 | NA | non-coding | downstream | 7511 | 19111700 ~ 19111989 (-) |
G778694 | NA | non-coding | downstream | 10250 | 19108878 ~ 19109250 (-) |
G778682 | NA | non-coding | downstream | 40181 | 19079105 ~ 19079319 (-) |
G778679 | NA | non-coding | downstream | 42184 | 19077065 ~ 19077316 (-) |
LOC110531685 | LOC106577724 | non-coding | upstream | 123787 | 19247704 ~ 19249648 (-) |
G778787 | NA | non-coding | upstream | 153301 | 19277319 ~ 19278218 (-) |
G778849 | LOC106608711 | non-coding | upstream | 274203 | 19398221 ~ 19442473 (-) |
G778216 | NA | other | downstream | 761397 | 18355441 ~ 18358103 (-) |
G776822 | NA | other | downstream | 1459017 | 17659690 ~ 17660483 (-) |
G776820 | NA | other | downstream | 1460097 | 17659016 ~ 17659403 (-) |
G776814 | LOC106600668 | other | downstream | 1463175 | 17655988 ~ 17656325 (-) |
G776812 | LOC106566110 | other | downstream | 1463520 | 17655594 ~ 17655980 (-) |
G780209 | NA | other | upstream | 693673 | 19817691 ~ 19824571 (-) |
LOC110531704 | LOC106608762 | other | upstream | 947978 | 20022194 ~ 20075490 (-) |
LOC110531717 | LOC106577635 | other | upstream | 1178060 | 20302051 ~ 20324316 (-) |
LOC110531730 | adgrl3 | other | upstream | 1806942 | 20930960 ~ 21272646 (-) |
G782003 | NA | other | upstream | 2651700 | 21775718 ~ 21776210 (-) |