nitr3 (nitr3)


Basic Information

Item Value
gene id nitr3
gene name nitr3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19172635 ~ 19174378 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124300.1
CACTATACAGTTTAAAAAGGAAATTATGATTATATATTGGACAATCTTTTTGTTTTACGCCAATTTTGGTTGTGCACTTAACAAGGATGTAATCCAACCAGACCCTGTGATAGTTACACGCCTGGGACAAAATGTATCTCTCACTTGCTTTTGTCAATCTAATTTGATGGTCAGGGTCTCTTGGTTCAAGCAAACTGTTGGACAGAAGCCTCTTCTCATGGCATCATCATATTATCGCACTAAAACTAGTTTTTATTCCAAAAACTTTAACAAAGACTTTACTGAGACTAAACGTTTGAGTGTGAAGAgaggatttgacagctctaacctGACCATCTCCAAGACAGAGTCAGGGGACACAGCTACATACTACTGTGGTGTTATGGAAGAGGGCGAACTCAAATTTGCAGAAGGAACTTCTTTAATTGTCAAAGGTTCAGAGTCCAACAGCATGTCTGTGCTCCAGCAGCCTGTGTCTGAGTCAGTTCAGCCAGGAGACTCTGTGACTCTGAACTGTACAATACACACGGAGACCTGTGCAGGAGAACACAGTGTCTATTGGTTCAGACATGGCTCAGGAAAATTCCATCCAGGAATAATTTACAACAATGGAGACAGGAGAGATCCGTGTGAGAATTGCCCAGAGGCTGGGTCTCCTACACAGAGCTGTGTCTACAACCTCCCCAAGAGGAACCTCAGCCTCTCTGATGCTGGGACTtactactgtgctgtggcctcatGTGGGGAGATACTGTTTGGGAAAGGGACCAAGCTGGAAATGGACTATGGTTGTAAGAAGGAACGTGTTCTCTTGGTGTACTGCGGCGTAGCGTTGGCTCTTtgtgtcatcatcatcatattccTTGCTTGTGTTATGTATAAGAGTACCAAGAAAACCTTTCTGCTGTGCGGAGGAACGCATCCTCAGCCAAGTGGTCTGACAGTCCCCAGTTCTCATGACCAGGATCAAGAAGATGATGACACACTCACGTCGGTCCATTACGCTGCTCTGAATATCATCCACAAGAAGCCAAAGACCCAGAGACAGAGGAGCAccatggagagagacacagagtactCTGGGGTGAGGTGCTAAAACATGGACAAAAACATAGATTGATCTCCTCTAAGACTTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124300.1 True 1137 mRNA 0.45 6 19172635 19174378

Neighbor

gene id symbol gene type direction distance location
LOC110532949 nitr3 coding downstream 16046 19148102 ~ 19156589 (-)
nitr2 nitr2 coding downstream 48617 19119500 ~ 19124018 (-)
tifa LOC106577687 coding downstream 86636 19084032 ~ 19085999 (-)
LOC118966012 NA coding downstream 102423 19066691 ~ 19070212 (-)
LOC110531672 LOC106577688 coding downstream 125162 19017546 ~ 19047473 (-)
LOC110512425 LOC106577746 coding upstream 3667 19178045 ~ 19179798 (-)
LOC110531690 NA coding upstream 21890 19196202 ~ 19197333 (-)
LOC110531677 LOC106577725 coding upstream 27575 19201953 ~ 19204332 (-)
LOC110531679 NA coding upstream 51319 19225697 ~ 19228686 (-)
LOC110532953 LOC106577743 coding upstream 66749 19241127 ~ 19242842 (-)
G778697 NA non-coding downstream 59708 19112661 ~ 19112927 (-)
G778696 NA non-coding downstream 60646 19111700 ~ 19111989 (-)
G778694 NA non-coding downstream 63385 19108878 ~ 19109250 (-)
G778682 NA non-coding downstream 93316 19079105 ~ 19079319 (-)
G778679 NA non-coding downstream 95319 19077065 ~ 19077316 (-)
LOC110531685 LOC106577724 non-coding upstream 73427 19247704 ~ 19249648 (-)
G778787 NA non-coding upstream 102941 19277319 ~ 19278218 (-)
G778849 LOC106608711 non-coding upstream 223843 19398221 ~ 19442473 (-)
G778216 NA other downstream 814532 18355441 ~ 18358103 (-)
G776822 NA other downstream 1512152 17659690 ~ 17660483 (-)
G776820 NA other downstream 1513232 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1516310 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1516655 17655594 ~ 17655980 (-)
G780209 NA other upstream 643313 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 897618 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 1127700 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 1756582 20930960 ~ 21272646 (-)
G782003 NA other upstream 2601340 21775718 ~ 21776210 (-)

Expression


Co-expression Network