Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531685 |
| gene name | LOC106577724 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 19247704 ~ 19249648 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110531685 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036989268.1 | False | 1190 | mRNA | 0.45 | 6 | 19247704 | 19249648 |
| TU887348 | True | 256 | lncRNA | 0.49 | 2 | 19247805 | 19248181 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532953 | LOC106577743 | coding | downstream | 4862 | 19241127 ~ 19242842 (-) |
| LOC110531679 | NA | coding | downstream | 19018 | 19225697 ~ 19228686 (-) |
| LOC110531677 | LOC106577725 | coding | downstream | 43372 | 19201953 ~ 19204332 (-) |
| LOC110531690 | NA | coding | downstream | 50371 | 19196202 ~ 19197333 (-) |
| LOC110512425 | LOC106577746 | coding | downstream | 67906 | 19178045 ~ 19179798 (-) |
| LOC110532954 | LOC106577681 | coding | upstream | 10255 | 19259903 ~ 19261084 (-) |
| LOC110531676 | nitr3 | coding | upstream | 40386 | 19290034 ~ 19292357 (-) |
| LOC110532955 | NA | coding | upstream | 43109 | 19292757 ~ 19293496 (-) |
| LOC118966014 | LOC106577677 | coding | upstream | 60411 | 19310059 ~ 19310970 (-) |
| LOC110532957 | LOC106577671 | coding | upstream | 74084 | 19323732 ~ 19324732 (-) |
| G778697 | NA | non-coding | downstream | 134777 | 19112661 ~ 19112927 (-) |
| G778696 | NA | non-coding | downstream | 135715 | 19111700 ~ 19111989 (-) |
| G778694 | NA | non-coding | downstream | 138454 | 19108878 ~ 19109250 (-) |
| G778787 | NA | non-coding | upstream | 27671 | 19277319 ~ 19278218 (-) |
| G778849 | LOC106608711 | non-coding | upstream | 148573 | 19398221 ~ 19442473 (-) |
| G778867 | NA | non-coding | upstream | 149925 | 19399573 ~ 19443353 (-) |
| G779050 | NA | non-coding | upstream | 342204 | 19591852 ~ 19592172 (-) |
| G779053 | NA | non-coding | upstream | 345390 | 19595038 ~ 19595451 (-) |
| G778216 | NA | other | downstream | 889601 | 18355441 ~ 18358103 (-) |
| G776822 | NA | other | downstream | 1587221 | 17659690 ~ 17660483 (-) |
| G776820 | NA | other | downstream | 1588301 | 17659016 ~ 17659403 (-) |
| G776814 | LOC106600668 | other | downstream | 1591379 | 17655988 ~ 17656325 (-) |
| G776812 | LOC106566110 | other | downstream | 1591724 | 17655594 ~ 17655980 (-) |
| G780209 | NA | other | upstream | 568043 | 19817691 ~ 19824571 (-) |
| LOC110531704 | LOC106608762 | other | upstream | 822348 | 20022194 ~ 20075490 (-) |
| LOC110531717 | LOC106577635 | other | upstream | 1052430 | 20302051 ~ 20324316 (-) |
| LOC110531730 | adgrl3 | other | upstream | 1681312 | 20930960 ~ 21272646 (-) |
| G782003 | NA | other | upstream | 2526070 | 21775718 ~ 21776210 (-) |
