LOC110532955


Basic Information

Item Value
gene id LOC110532955
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19292757 ~ 19293496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053442.1
TGGGAACCCCTTCTCCGCAAAGCCAGTATGGGAATCCTCATGCCAACACGTCAGATCAACAGCTCCACCGTGACAATGATGGCCAGAACTATACTGGCCTGAAGTTCACTGACAAAAAGAGCACCAAGCCAGGagacggagggaacagagagaggaagaaaccatCTACTCTGGATGCCATTGCAGGAGCCAAGATTTGCCTAATTTAAATGTAAAATCACTCTGATGCTGAGCATAATTGTTCAGAAAGTGTGACAGCTGATACGAGGAGGTTTTCAGAAGTCTCAAATCCTCAGAAATAGTGGTTgaggctgactgactggatacatTTGTTTTTGTAGAAGTGTACAACACAATGTATATAATGATTTTGAAAATATATAAACTCCTACTTTTGACGATAATGGTTGTAAAATGGACCTTTGTAACCTGCCTTAATGCTTATATGCTATTTCAATAAAACACTTATTTGCACCAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106577722

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053442.1 True 479 mRNA 0.41 3 19292757 19293496

Neighbor

gene id symbol gene type direction distance location
LOC110531676 nitr3 coding downstream 400 19290034 ~ 19292357 (-)
LOC110532954 LOC106577681 coding downstream 31673 19259903 ~ 19261084 (-)
LOC110531685 LOC106577724 coding downstream 43109 19247704 ~ 19249648 (-)
LOC110532953 LOC106577743 coding downstream 49915 19241127 ~ 19242842 (-)
LOC110531679 NA coding downstream 64071 19225697 ~ 19228686 (-)
LOC118966014 LOC106577677 coding upstream 16563 19310059 ~ 19310970 (-)
LOC110532957 LOC106577671 coding upstream 30236 19323732 ~ 19324732 (-)
LOC110531695 LOC106577660 coding upstream 569287 19862783 ~ 19868337 (-)
LOC110531696 LOC106577660 coding upstream 575942 19869438 ~ 19872456 (-)
LOC110531700 LOC106577652 coding upstream 656351 19949847 ~ 19961244 (-)
G778787 NA non-coding downstream 14539 19277319 ~ 19278218 (-)
LOC110531677 LOC106577725 non-coding downstream 90113 19201953 ~ 19204332 (-)
LOC110531690 NA non-coding downstream 95487 19196202 ~ 19197333 (-)
G778697 NA non-coding downstream 179830 19112661 ~ 19112927 (-)
G778849 LOC106608711 non-coding upstream 104725 19398221 ~ 19442473 (-)
G778867 NA non-coding upstream 106077 19399573 ~ 19443353 (-)
G779050 NA non-coding upstream 298356 19591852 ~ 19592172 (-)
G779053 NA non-coding upstream 301542 19595038 ~ 19595451 (-)
G779055 NA non-coding upstream 301957 19595453 ~ 19595782 (-)
G778216 NA other downstream 934654 18355441 ~ 18358103 (-)
G776822 NA other downstream 1632274 17659690 ~ 17660483 (-)
G776820 NA other downstream 1633354 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1636432 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1636777 17655594 ~ 17655980 (-)
G780209 NA other upstream 524195 19817691 ~ 19824571 (-)
LOC110531704 LOC106608762 other upstream 778500 20022194 ~ 20075490 (-)
LOC110531717 LOC106577635 other upstream 1008582 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 1637464 20930960 ~ 21272646 (-)
G782003 NA other upstream 2482222 21775718 ~ 21776210 (-)

Expression


Co-expression Network