LOC110532957 (LOC106577671)


Basic Information

Item Value
gene id LOC110532957
gene name LOC106577671
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19323732 ~ 19324732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110532957
ATGATCAGACATTGGACAgtctttctgttttttttttTTTGTGCGTTAATAACCAAGGACATTGTTCAACCAAACCCAGTGATGGTTACTCACCATAGAGGTAGTGTGAATATCACTTGCTTTTGGCAAACTGATGTCAATACCAATGTCGCTTGGTTCAAGCAGACTCTTGGACAGAAACCCCTTCTCATGGCGTCGTCATTTTAAAGTGGCTAAGATATTTTTTACTTTAACAACTTTACCAAAGGACTTTACTGAGACTAAACATCTGAGTGTGAACAGAGGAGTTGACAGCTTTAACCTGACCATCTCCAAGACAGAGCCATGGGACTCAGCCACATACTACTGTGGTGCTATGGAAGCGGGCAAAGTCAAATTTGGAGAATTAACTGTTTTAATTGTCAAAGGTTCAGAGTCCAACAGCATGTCTGTGCTCCAGCAGCCTGTGTCTGAGTCAGGCCATCCAGGAGACTCTGTGACTCTGAACTGTACAGTACACACTGAGACGTGTGCAGGAGAACACATTGTCTATTGGCTCAGACATGGCTCAGGAGAATCCCATCCAGGAATCATTTACACTCATGGAGACAGGAGTGATCAGTGTGAGAAGAGCCCTGAGGCTGGGTCTCCTACACAGAGCTGTGTCTACAACCTCCCGTAGAGAAACCTCAGCCTGTCTAATGCTGGGACTTACTACTTACTATGA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106577671

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110532957 True 706 mRNA 0.44 3 19323732 19324732

Neighbor

gene id symbol gene type direction distance location
LOC118966014 LOC106577677 coding downstream 12762 19310059 ~ 19310970 (-)
LOC110532955 NA coding downstream 30236 19292757 ~ 19293496 (-)
LOC110531676 nitr3 coding downstream 31375 19290034 ~ 19292357 (-)
LOC110532954 LOC106577681 coding downstream 62648 19259903 ~ 19261084 (-)
LOC110531685 LOC106577724 coding downstream 74084 19247704 ~ 19249648 (-)
LOC110531695 LOC106577660 coding upstream 538051 19862783 ~ 19868337 (-)
LOC110531696 LOC106577660 coding upstream 544706 19869438 ~ 19872456 (-)
LOC110531700 LOC106577652 coding upstream 625115 19949847 ~ 19961244 (-)
LOC110531702 LOC106577654 coding upstream 642237 19966969 ~ 19972714 (-)
LOC110531704 LOC106608762 coding upstream 697462 20022194 ~ 20075490 (-)
G778787 NA non-coding downstream 45514 19277319 ~ 19278218 (-)
LOC110531677 LOC106577725 non-coding downstream 121088 19201953 ~ 19204332 (-)
LOC110531690 NA non-coding downstream 126462 19196202 ~ 19197333 (-)
G778697 NA non-coding downstream 210805 19112661 ~ 19112927 (-)
G778849 LOC106608711 non-coding upstream 73489 19398221 ~ 19442473 (-)
G778867 NA non-coding upstream 74841 19399573 ~ 19443353 (-)
G779050 NA non-coding upstream 267120 19591852 ~ 19592172 (-)
G779053 NA non-coding upstream 270306 19595038 ~ 19595451 (-)
G779055 NA non-coding upstream 270721 19595453 ~ 19595782 (-)
G778216 NA other downstream 965629 18355441 ~ 18358103 (-)
G776822 NA other downstream 1663249 17659690 ~ 17660483 (-)
G776820 NA other downstream 1664329 17659016 ~ 17659403 (-)
G776814 LOC106600668 other downstream 1667407 17655988 ~ 17656325 (-)
G776812 LOC106566110 other downstream 1667752 17655594 ~ 17655980 (-)
G780209 NA other upstream 492959 19817691 ~ 19824571 (-)
LOC110531717 LOC106577635 other upstream 977346 20302051 ~ 20324316 (-)
LOC110531730 adgrl3 other upstream 1606228 20930960 ~ 21272646 (-)
G782003 NA other upstream 2450986 21775718 ~ 21776210 (-)

Expression


Co-expression Network