LOC110531684 (LOC106577681)


Basic Information

Item Value
gene id LOC110531684
gene name LOC106577681
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19455712 ~ 19457543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987524.1
ACTTTAAAGATGATCGCACTGTGTCTGATATTTCCACTTCTTGTAGAGATGGTTCATGGAGTAGCTGGGACTGAATCCTCATCCATCAGTCAGAAGATTGGTCTCATGTCAGCCAACGTTGGAGACATGGTGGTTTTACGTTGCTTCAATGCAGGCGATGAGGGAATAATGTTCTCCTGGTACAAGCAAACTTTTGGAAATGTTCCTCAGCTCATCTCAACCATCTATAAGTATGGCAGGAATGCAACATTTTACCATGAGTTTAAGAATAACCCTCGCTTCTCAGTGGAAGGTGGCCAAGGAAAAAATCACCTAATGATAGCAGATGTGGAACTCTCTGATTCAGGGACATACTACTGTGGAAGTGATTATGGATACAAGGTGGAGTTTGGACAAGGATTCATTCTCATCATAAAAGATTCAGgttccagaaatatgattatacTTCAGCAGCCTGTGTCTGAGTCAGTCCAGCCAGGAAACTCTGTGACTCTGAACTGTACAATCCACACTGAGACCTGTGCAGGAGAACACAGTGTCTATTGGTTCAGACATGGCTCAGGAGAATCCCATCCAGGAATCATGTACACCCATGGAGAAAGGAGTGATCAGTGTGTAAAGAGCCTTGAATCTGTGTCTCCTGCACAGAGCTGTGTCTACAACCTCCCCAAGAGGAACCTCAGCCTCTCGGATTCTGGGACTTACTATTGTGCTGTGGCCTCATGTGGGGAGATACTGTTTGGGAACGGTACCAAGCTGGATATTGAGGGCGGGAGTGTAGACCCTCTTCTCTTTGTATACTGCCTTGGTGTAGCATTGGCCTTTGCGTTTATCTTGATCATTCTCCTTGCCTGCATCATTTACAAGATGAAGAAGACAACATGTCTGCAGTGCAGTGAAATGGTCTCTCAGACAAGAGGTCCTACAATTTCCCAGTCAGATGCAGGGAGCCAAGATGCAGACAGTCTCCATTACGCAGCTCTGCCTCTGAGCAACAAGAAGAACAGGTCTAGAAGACAGAGAGGAAACATGGAGGAAGAGACAGTGGTCATGTACTCTGGAATTAGACAGTAGTATCACGTTTCAGGCATGACCCAGATGTAGACAGTGTCGATGAAACAAAGGTTTATTTCTAAtaaaggggcaggcaaacgacaggtcaaaggcagacaagggtcagtaatc

Function

NR:

description
uncharacterized protein LOC110531689

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987524.1 True 1185 mRNA 0.45 6 19455712 19457543

Neighbor

gene id symbol gene type direction distance location
LOC110531683 LOC106577670 coding upstream 12561 19395967 ~ 19443151 (+)
LOC110532960 LOC106577747 coding upstream 84785 19364680 ~ 19370927 (+)
LOC110532958 LOC106577717 coding upstream 111873 19340727 ~ 19343839 (+)
LOC110531678 LOC106577718 coding upstream 117150 19336641 ~ 19338562 (+)
LOC118966013 NA coding upstream 260980 19193597 ~ 19194732 (+)
LOC110532963 LOC106577673 coding downstream 15901 19473444 ~ 19477681 (+)
LOC110531681 LOC106577677 coding downstream 46422 19503965 ~ 19506500 (+)
LOC110531687 LOC106577672 coding downstream 111711 19569254 ~ 19571207 (+)
LOC110532966 dock11 coding downstream 158592 19616135 ~ 19704178 (+)
il13ra1b il13ra1b coding downstream 248502 19706045 ~ 19723541 (+)
G777913 NA non-coding upstream 105840 19344620 ~ 19349872 (+)
G777889 NA non-coding upstream 146282 19309195 ~ 19309430 (+)
G777865 NA non-coding upstream 178905 19276224 ~ 19276807 (+)
G777707 NA non-coding upstream 378945 19076112 ~ 19076767 (+)
G778967 NA non-coding downstream 87528 19545071 ~ 19555880 (+)
G779052 NA non-coding downstream 137645 19595188 ~ 19595413 (+)
G779083 NA non-coding downstream 178765 19636308 ~ 19706947 (+)
G779137 NA non-coding downstream 306385 19763928 ~ 19764140 (+)
G779138 NA non-coding downstream 307664 19765207 ~ 19765716 (+)
LOC110531664 LOC106577696 other upstream 798138 18656177 ~ 18673318 (+)
G777396 NA other upstream 955694 18499614 ~ 18500018 (+)
G777165 NA other upstream 1347230 18108019 ~ 18108482 (+)
G777113 NA other upstream 1450044 18003267 ~ 18005668 (+)
G777111 NA other upstream 1453530 18001889 ~ 18002182 (+)
LOC110531694 LOC106577663 other downstream 360145 19817663 ~ 19824606 (+)
LOC110531697 NA other downstream 418725 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 551973 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 582068 20039611 ~ 20040283 (+)
LOC110531706 naa38 other downstream 621893 20079382 ~ 20082084 (+)

Expression


Co-expression Network