il13ra1a (il13ra1a)


Basic Information

Item Value
gene id il13ra1a
gene name il13ra1a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 19748164 ~ 19755992 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614386.2
GCTCAAACTCCGCCCACTTTCATTTCAGAGCAGGATCAGGAGAATTGTAAGATCCTTCTTTCTTAGCACAACAAACAGCTGTTTTCCACGTTTCTTTTCGGTTTTGTTGGATCCCTGGTTTTCTCCATCCCTTTTTAACTGAACAGCGCAACATCTGTTGAGAACTTTATTTTGGATAGAATTCGGTCGGGACTGACAGGTCTTGACAGAGATCACTAGCATAGGTTGATACAATGTACAAATGCTGGGGAGTTTTCGTCTTGTACTATTTCGTTTCATTCGTAGCTACACAGCCTGAAACAGAGCTCCCATCACCAAGAAATGTGACTTTCTCTTGGACGAACGAGTTCTGCTGGGAGCTTTCATGGAGTCTACTGGAGAATGTTGATAGTCAGAGATGTAAATACCATATCAATATATCAAGGATAGGCAAGAATAACATAATCAGGAGGAAGAAGGAAACACGGTTAGAGGAGTGTTTTCCTCTGATGGGAGGTGTGCGTTTCTTCATACAAACTCAGTGTAACAAGACACAGATGAGTCAAACTGTAGTTCACACCATCCCTGCCCCCACAGAGTTGGTGACGAACTTCAAATGTTTTCTCTACACCTCTAAGGCCATGAACTGCAGCTGGCTCCTAGCCAATCAGGTCCCAGAAGACCTTCAGCTTTACTACGGGTTAAAAAATATGAGTAAGGTATCGGAATGCAATGAGTACCTGTACAACGGCAATCAGAGGACAGGATGTCATCTGAGAGGAGACTCCCACACGCGGATCTTCTTCCAGGTCAATGGGACTCTCAACGGTTCATCGGTACGGAATACCTTCGAAGTGAATCCTCAGGACCATGTGGTGCAGCCTATACCTCTTGATTTGAAGATCACAGAGGAAGGGAGCAACCTCAATATTAGCTGGATTTCACCAGACATAAGACATCCACACTGTTGGAAGTACGTCATCAACTATACCAGATGTAAAATACCTGAGAGTATGTCCTTAGAAGACAAGACTTGGATCATGGTGAACTATGACCCTCACTGTCAGTATCGTGTTCGCATTAAGCCCATCTTTTTACAATTGTGTGGTATGGGAGAGGGTGACTGGACTGAGGAGGAAATATATGgtAAAGATGGGAATCGGGATTGGCACCTGCATGTTGCAGCCGTCTTCATTTCAGTCATGGCGGTTATAGTTTCCATCCTGGTTTGTTTTTGTATAAGGAAACACAAGGACAAGATCCTCCCCAAAGTTCCCAAGCCAACCAACCTCATCAGTGATAtgttcaacaacaacaatgaGATGAGCATTAATGAGAACCTCTACATCCCAGCACAAGAGGAAGTAGACTGTAAGATCACCCTAGTACAATCCCCTCTTCCTCAGCAGCCAGAGTCATGAGAAACATGAATATACAGTGAACCTGTGGACAAGCTGGTAGTGGCCCAGCAGACTGGGAGGACCTCAGTGTTTTAACCTTGTGTGGTGGTGGCTTTTTGACTCAACATGGGATACTTTGAGATTTAACAACAGTAACTGGGATCCCCGGACTGTCCCAGGACCACTCTTCACATTTCCTGAATTTTTTTTAATGACAAGACCCGGGAAACTACAACATTTCCCACCAATGTTGCACTAATGCAATTCCACAAAATACACACGCGCAGCAGCAAATTAGCTAAAAATAAAATGGCACATTATCCAAACAGGTAAGCTTTTACCTTAGCTTATTTACTTCACACAAAGTCTCCATAAATTCAAAGCACACACATACTTGACACTGCCTGACTGCACACGAGAAACAAATGCGATTTACAGTTATCATCAGAACTCAAAATTCGATCCCGGTCCGACCCGAGCCTGGTGAGATGAAGTCGGAGCCCAGGCCTAGTCCGACATCACAGAAATAAAATAGCCCGAATGCGAAAAAAAGCAAGATTTCTGGAAAACAGTAGGCTATGTTGATTTAAACTGGTGTTGAGAACAAAATGGCGGAGGTGGACGGTAGCGGAGTGAGGAGACGAGGAAACGGACATTGGGCCAGAaaaagcacagagagaggaaaactCACCTTATTATGATCATCTGAATGATGAAAATATTGTAAAAAGGTATTCTAATGCAATTGAAGGCATGTATCAAATTCATGCTTATACTGAAACTCCCAAAGTCATATCCAACCGTTATACTAATTTAAAGCAATAGTTGTGTGTGGTCACGTAGATTATAATTTCAGCACCGTTTTGACCGGGCCAGCGCCATCACGCTGCTTTGAGACAAGCTTAGGGGACTCGTCTAGATAAATCAatgtcacatttttgttttcactgaatctccatttggATATTTGGTAACCATTAGGCTACGTTGTAGTGTGCTAATGataatctttttttttctctatttTGCTCTATTTTGCTCTTCACTTGCGTAGTAGTTTGTCCTACTCCCAACCAAAAACCTGTGACATATCTGAtaatcaatcaatgtgattttgtttcactgaatctctgtCTATATATTTGGTCAATTGCTCTCTGGCTGTGCAAGTGGAAATGGTAGCTCATTTATTCATTTGCTCATCTATCtttgatcagaaacatttagcatgcaataatttagcccaaatcaaatgtattatttttctATTGACTCACTAGCCTTTAAATAAAGGCTATTTACCTATCGTCCCAATCCCAAGGAAACCCAAAATCCTTCATTGTAATCCATAGGTTGCTGTATCAGAGCACGGCTCGCCTATGCTTATCAAAATACAGCTAGAACATTTCCCCcgcctctctgcactgtctcgtatTGCTGCCCTAATGAGAGCTTCAATAGAGCTTCAATATCAATGAGAGCTTCAATATCAATAAAGATATCAATAAAGATGTGTTCATTAAACTTTGA
>NM_001246337.1
CAGAGCAGGATCAGGAGAATTGTAAGATCCTTCTTTCTTAGCACAACAAACAGCTGTTTTCCACGTTTCTTTTCGGTTTTGTTGGATCCCTGGTTTTCTCCATCCCTTTTTAACTGAACAGCGCAACATCTGTTGAGAACTTTATTTTGGATAGAATTCGGTCGGGACTGACAGGTCTTGACAGAGATCACTAGCATAGGTTGATACAATGTACAAATGCTGGGGAGTTTTCGTCTTGTACTATTTCGTTTCATTCGTAGCTACACAGCCTGAAACAGAGCTCCCATCACCAAGAAATGTGACTTTCTCTTGGACGAACGAGTTCTGCTGGGAGCTTTCATGGAGTCTACTGGAGAATGTTGATAGTCAGAGATGTAAATACCATATCAATATATCAAGGATAGGCAAGAATAACATAATCAGGAGGAAGAAGGAAACACGGTTAGAGGAGTGTTTTCCTCTGATGGGAGGTGTGCGTTTCTTCATACAAACTCAGTGTAACAAGACACAGATGAGTCAAACTGTAGTTCACACCATCCCTGCCCCCACAGAGTTGGTGACGAACTTCAAATGTTTTCTCTACACCTCTAAGGCCATGAACTGCAGCTGGCTCCTAGCCAATCAGGTCCCAGAAGACCTTCAGCTTTACTACGGGTTAAAAAATATGAGTAAGGTATCGGAATGCAATGAGTACCTGTACAACGGCAATCAGAGGACAGGATGTCATCTGAGAGGAGACTCCCACACGCGGATCTTCTTCCAGGTCAATGGGACTCTCAACGGTTCATCGGTACGGAATACCTTCGAAGTGAATCCTCAGGACCATGTGCAGCCTATACCTCTTGATTTGAAGATCACAGAGGAAGGGAGCAACCTCAATATTAGCTGGATTTCACCAGACATAAGACATCCACACTGTTGGAAGTACGTCATCAACTATACCAGATGTAAAATACCTGAGAGTATGTCCTTAGAAGACAAGACTTGGATCATGGTGAACTATGACCCTCACTGTCAGTATCGTGTTCGCATTAAGCCCATCTTTTTACAATTGTGTGGTATGGGAGAGGGTGACTGGACTGAGGAGGAAATATATGgtAAAGATGGGAATCGGGATTGGCACCTGCATGTTGCAGCCGTCTTCATTTCAGTCATGGCGGTTATAGTTTCCATCCTGGTTTGTTTTTGTATAAGGAAACACAAGGACAAGATCCTCCCCAAAGTTCCCAAGCCAACCAACCTCATCAGTGATAtgttcaacaacaacaatgaGATGAGCATTAATGAGAACCTCTACATCCCAGCACAAGAGGAAGTAGACTGTAAGATCACCCTAGTACAATCCCCTCTTCCTCAGCAGCCAGAGTCATGAGAAACATGAATATACAGTGAACCTGTGGACAAGCTGGTAGTGGCCCAGCAGACTGGGAGGACCTCAGTGTTTTAACCTTGTGTGGTGGTGGCTTTTTGACTCAACATGGGATACTTTGAGATTTAACAACAGTAACTGGGATCCCCGGACTGTCCCAGGACCACTCTTCACATTTCCTGAATTTTTTTTAATGACAAGACCCGGGAAACTACAACATTTCCCACCAATGTTGCACTAATGCAATTCCACAAAATACACACGCGCAGCAGCAAATTAGCTAAAAATAAAATGGCACATTATCCAAACAGGTAAGCTTTTACCTTAGCTTATTTACTTCACACAAAGTCTCCATAAATTCAAAGCACACACATACTTGACACTGCCTGACTGCACACGAGAAACAAATGCGATTTACAGTTATCATCAGAACTCAAAATTCGATCCCGGTCCGACCCGAGCCTGGTGAGATGAAGTCGGAGCCCAGGCCTAGTCCGACATCACAGAAATAAAATAGCCCGAATGCGAAAAAAAGCAAGATTTCTGGAAAACAGTAGGCTATGTTGATTTAAACTGGTGTTGAGAACAAAATGGCGGAGGTGGACGGTAGCGGAGTGAGGAGACGAGGAAACGGACATTGGGCCAGAaaaagcacagagagaggaaaactCACCTTATTATGATCATCTGAATGATGAAAATATTGTAAAAAGGTATTCTAATGCAATTGAAGGCATGTATCAAATTCATGCTTATACTGAAACTCCCAAAGTCATATCCAACCGTTATACTAATTTAAAGCAATAGTTGTGTGTGGTCACGTAGATTATAATTTCAGCACCGTTTTGACCGGGCCAGCGCCATCACGCTGCTTTGAGACAAGCTTAGGGGACTCGTCTAGATAAATCAatgtcacatttttgttttcactgaatctccatttggATATTTGGTAACCATTAGGCTACGTTGTAGTGTGCTAATGataatctttttttttctctatttTGCTCTATTTTGCTCTTCACTTGCGTAGTAGTTTGTCCTACTCCCAACCAAAAACCTGTGACATATCTGAtaatcaatcaatgtgattttgtttcactgaatctctgtCTATATATTTGGTCAATTGCTCTCTGGCTGTGCAAGTGGAAATGGTAGCTCATTTATTCATTTGCTCATCTATCtttgatcagaaacatttagcatgcaataatttagcccaaatcaaatgtattatttttctATTGACTCACTAGCCTTTAAATAAAGGCTATTTACCTATCGTCCCAATCCCAAGGAAACCCAAAATCCTTCATTGTAATCCATAGGTTGCTGTATCAGAGCACGGCTCGCCTATGCTTATCAAAATACAGCTAGAACATTTCCCCcgcctctctgcactgtctcgtatTGCTGCCCTAATGAGAGCTTCAATAGAGCTTCAATATCAATGAGAGCTTCAATATCAATAAAGATATCAATAAAGATGTGTTCATTAAACTTT

Function

NR:

description
IL-13 receptor-alpha-1-a precursor isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614386.2 False 2909 mRNA 0.42 9 19748164 19755992
NM_001246337.1 True 2879 mRNA 0.42 9 19748189 19755990

Neighbor

gene id symbol gene type direction distance location
il13ra1b il13ra1b coding upstream 24623 19706045 ~ 19723541 (+)
LOC110532966 dock11 coding upstream 43986 19616135 ~ 19704178 (+)
LOC110531687 LOC106577672 coding upstream 176957 19569254 ~ 19571207 (+)
LOC110531681 LOC106577677 coding upstream 241664 19503965 ~ 19506500 (+)
LOC110532963 LOC106577673 coding upstream 270483 19473444 ~ 19477681 (+)
trnar-ucu-3 NA coding downstream 13802 19769794 ~ 19769867 (+)
LOC110531692 LOC106577665 coding downstream 15174 19771166 ~ 19806842 (+)
LOC110532967 ndufs2 coding downstream 51725 19807717 ~ 19817403 (+)
LOC110531694 LOC106577663 coding downstream 61671 19817663 ~ 19824606 (+)
LOC110531693 LOC106577661 coding downstream 69720 19825712 ~ 19853720 (+)
G779083 NA non-coding upstream 41217 19636308 ~ 19706947 (+)
G779052 NA non-coding upstream 152751 19595188 ~ 19595413 (+)
G778967 NA non-coding upstream 192284 19545071 ~ 19555880 (+)
LOC110531683 LOC106577670 non-coding upstream 347885 19395967 ~ 19443151 (+)
G777913 NA non-coding upstream 398292 19344620 ~ 19349872 (+)
G779137 NA non-coding downstream 7936 19763928 ~ 19764140 (+)
G779138 NA non-coding downstream 9215 19765207 ~ 19765716 (+)
G779183 LOC106577660 non-coding downstream 106682 19862674 ~ 19870992 (+)
G779184 LOC106577660 non-coding downstream 108922 19864914 ~ 19872043 (+)
LOC110531664 LOC106577696 other upstream 1090590 18656177 ~ 18673318 (+)
G777396 NA other upstream 1248146 18499614 ~ 18500018 (+)
G777165 NA other upstream 1639682 18108019 ~ 18108482 (+)
G777113 NA other upstream 1742496 18003267 ~ 18005668 (+)
G777111 NA other upstream 1745982 18001889 ~ 18002182 (+)
LOC110531697 NA other downstream 120276 19876221 ~ 19914138 (+)
LOC110531703 LOC106577651 other downstream 253524 20009183 ~ 20090543 (+)
G779291 chd3 other downstream 283619 20039611 ~ 20040283 (+)
LOC110531706 naa38 other downstream 323444 20079382 ~ 20082084 (+)

Expression


Co-expression Network