XLOC_026631 (BX936420.1)


Basic Information

Item Value
gene id XLOC_026631
gene name BX936420.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 38525979 ~ 38529416 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051885
ggaaatgtttctgattcacgcatgcaaattcatcttcagatagtgtctttatagcaatgtgcatgcagtagattgctcagattacattgggaaaacaggcgactgctgcaaattgtgctttaatgtttagctggtcaaatgtatggtatggaaaccttatatacctgctagatgaacccgtctcatacagctgccattgcaaggctcagacactttgtagagaggaatttaacacaactgcctctaggagtcgccaatggaaataaaacagagacgcacaaaaaatgtgcgtacgcctgccagaaagctgccgtgaacccagccggcacacgaccgaccttcaacgttgaaatatggttgaaataaggtcagatgtgttttgaacgttgaaataatgttgatagaacgtttaatgttgaacggttgaaaaacagcctgcatatgacaaggcttcaacgttgaaatatggttgaaaatacgtcagtagttgctttaatgttgaaacaatgttgaatgataaatggttgaaaaaagttacagaaatccttgtacaaatcaacgttgacattttttttatcatggtctgtatgttgaattaacgtcatggcttcacccaatattcaacatgtttggttaccatggtatcggaggactcggcgcacgcggccacgcgcagcgcttcacttcacttaattacgaacacctgacctgcagtgcagcagaattcagagacatgtaacgtactccagagacgcactaacttgcacagcattgaatggaaaaggctttgcccatgtccagttgaggggCATCAAGAACACGCAGAAAGCCTACCTggacagactgcagttctgctactccatgccaaggcttttgtatggatgtcttgactactactgtgttctctaaaggtttttggaagctccatttgaggacatcaaggacatactgatggcctaaaccagtgtcagcctagacagacagacatctattgcagtcctgctacacaagaccaaactctctgcttttgtatggatgtctgactagtacggtgttctctaaaggtgtaactggagcaaaacaacagcacccgttacagtgaaatttgtgttcataaaagatagtgatatatgtgtaacaggtccagaacatttgtcataaaggttaaatcacagtaagtactgtaaaaataacttgtttgcctttgccacaacaggtcatggtgtgtgcttactgctcgtagtaaacacacatgctgatctgatgcgggagagatatacgcaaacacatttgtatttactgttttgttttgcctcactaaagtgttgttggagcttggtatgttcacagttgaaatcactgaagtcacatagaacgttttgacaatgtgttttgtgccttatcttgacaatgaccatcttgggaccattgctgtctgtagaggatgaggagcatttaatcaaaaatattttagtttgtgttctgaagattaacaggtctctgggatgacacaagtaattaataacagaacctatatgaacacttaatgtgacatgtaatagtgaaatagtggtcctacattcacaaatgtgagccattattataagacccatgtgaacatgcaatttttatgatactaataataataatggaataacaaattgcttttactgttgtgtttgtgagagagaatattctacacattttcttgatgatttactgaaatatttgtctacatgttccactgtcacaggtgctcagttttgctgcagtaatgctaaacacaatagatgtactttatgcaaaaaaaaaaaaaactactaaata

Function

GO:

id name namespace
GO:0090085 regulation of protein deubiquitination biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097966

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051885 True 1827 lncRNA 0.39 4 38525979 38529416

Neighbor

gene id symbol gene type direction distance location
XLOC_026630 baxa coding downstream 740106 37776489 ~ 37785873 (-)
XLOC_026629 baxa coding downstream 752179 37766473 ~ 37773800 (-)
XLOC_026628 si:dkey-260c8.6 coding downstream 765983 37757385 ~ 37759996 (-)
XLOC_026627 gpatch8 coding downstream 825987 37662444 ~ 37699992 (-)
XLOC_026626 NA coding downstream 876590 37634100 ~ 37649389 (-)
XLOC_026632 mpp3a coding upstream 118571 38647987 ~ 38692920 (-)
XLOC_026633 si:ch211-198m17.1 coding upstream 176009 38705425 ~ 38745598 (-)
XLOC_026634 znf281a coding upstream 233475 38762891 ~ 38783951 (-)
XLOC_026635 si:dkey-106c17.2 coding upstream 383141 38912557 ~ 38918717 (-)
XLOC_026636 NA coding upstream 442019 38971435 ~ 38975698 (-)
XLOC_026625 NA non-coding downstream 941172 37581522 ~ 37584807 (-)
XLOC_026621 CT573704.2 non-coding downstream 1450166 37075698 ~ 37075813 (-)
XLOC_026619 NA non-coding downstream 1553757 36969403 ~ 36972222 (-)
XLOC_026618 CT573704.1 non-coding downstream 1557986 36967871 ~ 36967993 (-)
XLOC_026637 NA non-coding upstream 582898 39112314 ~ 39113547 (-)
XLOC_026646 CU464118.1 non-coding upstream 842457 39371873 ~ 39454903 (-)
XLOC_026648 NA non-coding upstream 1032368 39561784 ~ 39563301 (-)
XLOC_026651 BX322795.1 non-coding upstream 1120029 39649445 ~ 39649562 (-)

Expression


Co-expression Network