XLOC_026634 (znf281a)


Basic Information

Item Value
gene id XLOC_026634
gene name znf281a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 38762891 ~ 38783951 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051889
ACAGTTCCCCGCGCTCAGACAAGATGGAGGAACGCAGCAGCTGCGGGAGAACAATGTTTGGACTCTGAACATTAAAAGAAACGGTCGAGGGGGCAAAATTTACAGAGAGCGACACAACGGTGGACATGCACTGGATGAGCGAGGTGGCCTTGCATTAAAGCAGACCCCATCTCCCCCTGTTCCAGCATCAGTGTCGGTGTGATAACACTCTGAGCCTTGCCCCTTCAACATGAGCCTGATCCAGGACAAACTTGGCAATGAGTTCCTCCGCTCCAATGGTGGCATGGAGCCAGGCTTCGGTGCGAGCATGCTCATGTTCAGCCACTTGCCCCCAGTTACTAGCTTCACCCGGCTGGCCAGTCAAACAGTTATGGCTGAACTGCAGCCCCATGAGATGATCTTGAAGAAGGAGCGGGACTCGCCAGACTGTGGAGCTGGAGGAGGACTCAATACTGGAGGCATGGTTGCTGGAGGCGGCATTGGAGGAATGATGGGAAATGTGGGCGATTATGTTCATGCCATGGGTATTAAACAGGAGAAGGTTTCTGAACACGATTACAGACTGCCTCTCTATCCGGGGACTGGAACTGGAGCTGGAGTACGAAGTGGAGGAGAGTTGCTGGAGGTCTCTCTGGGGAACCATCAGAACCTTGTGGTGCACGACCTCAGTTTGGGAAACCTGTCAGGGCGGCTGGTAAAGGAATCCTCAGGGAGGAAAGGTCGAAGGTCAAACGGTGAGGGACAGGAGGCCAAAACACGGAGGAAACGAGGAGAATCGAAGTCAATGATGCTGGATCCAGATGGAGGGAGCTTGTCTCCGAACTCCAAACCGCACATCTGTGAGCACTGCAATGCAGCGTTCCGGAGCTCCTATCATTTACGCAGACATGTGCTTATACACACAGGTGAGAGGCCTTTCCGCTGTACGCAGTGTAACATGAGTTTCATTCAAAAATACCTCTTACAGAGACACGAAAAGATCCACAGTGGAGAGAAGCCATTCAGCTGTGACCAGTGCAACATGCGTTTTATTCAGAAGTATCACATGGAAAGACACAAGAGAACACATAGTGGAGAAAAGCCATACAAGTGTGACACCTGCCAACAGtatttttccaGAACAGACCGATTGCTGAAGCACAAGCGGACATGTGGGGATGCCATCAAAAAGGGTCTGGATGGAGCAGATCATGAGTTGGGCTCAGCAGGTGACACAGAACACGGCAGCTACGGTATCTCTCAGGGAAATACGCCTACCCCTGCACGCAAACGGGGCAAGTCAAAAACCCCTGGTGAGGGGGGGGAACGCAAGCGTAAAAAGGCATCAGGGCCTATGGGGATGCAACATAGTCAAGGGGTGGATGGTTATGGGGTTCATGACTTTGGTTCAGCTGTGAACCACGGGGCATCAACAACTTCAGCTTCAGCCCAGCCAGACCCCAACATTCATACCGAACATGGCCAGTCACCCAAGATGGCCCTCAAAAAAGGAAACAGAAAGTCCCTGGAGAAGACCACCCACCCCATGGTTCATTCTAAGCCAGAGGACATGGAGTTGCCTTCTGGAGGAGGCTTGGATAGTCTCGGGCTTCTTCCAGGTCCAGGGGCCAAAGTTGGTCCCAGCAGCAGCGGCAGTAACTACGATGATGCAATGCAGTTCCTGAAGAAGAGGCGATACCTTAATGTGACAAACAGTGGCAGTGCTGGTTCTGGAGCTTCAGACTACGATGTCAGCCATCTGCAGTCACAGCCGACCGTCAATCAGGGTGTCGTTTCTGGGGTTCTAGACAGTGACGGCACACTTAGCCTACTGGACGCTTCCTCTCTGGTAGATATAAAACCAGACAAGTCTGGAATCCCGGATGAGGTTCTACAGAGCTTGTTAGACCACTATGCTCACAAGCCCGATGTTAGCTTTGACATCCCTGATCACCATCATGTTGAGCTTCAGCCGGCTGCCCCAGATGCCACAGACCCATTGGGACCCGAGGACAACCCATCAAGTCCCAACAGTGGCGACAAAGCAGTGATCATGCACGAGTACTCACGGTTTCTCCTACAAGCACTAGAGCGGACCAGTCACAGTGCAAGCTTTGTACTGGGTCCTGGTTCTGGCGTGACCACCACGGGACCTTTTCCTGGGACTAGCCCACTTTTGTCAGACAAGCATGTGTATACTTCCTCACCTCTTGAGTACTCATTCTCACATCCGGTCTCGTCTTCACCCTCACTTTCGTCTGTGCCAAAGTCCCACTTTGGTCTTCTTGAGGGCTCGTCACCTCCCCCGGGCTTCCACTTGAGCAGCCTGGAGCAGTCAGCGCACACACAGCAACTCACACCTTCCCAGGAGCTCACTGAACAGCTGGACAAGCAGCACACCTCCCCTCCGCCCCCTCCACATACCCCCAACACCAATGCCTACCAAATCGCACCTCAGCCTCCCGACCTGGGCGGTCCAAAGGAACCGCAAGGTCCCAAAAATGGCGCTACAGCCACCACCGGTGGATTCTCTCTGGCTGCTTCCCAGGACTTGGCTACCCTGGATTCAGTCAAGGCTCCATATCAGATTGAAAACTTTGCCCAGGCTTTTGGGGCACAGTTTAAAGGGGGCAGAGTGTCCCTGGCCTTCAGCAGTGACTCGGGGGGAGAGGTAAATCACCGCTTACAAACAGCAGGGCTTACTGTCTCCGAATTCTCAGGGTATAGCAGTCTCTTGGCTGATGCCAGCGACCCAGTCAGTAGTGGCTCCAAAACCCCAACAAGCCAAAGCTACAGGTGAATGGGCTCCTGTGCCTAGATGCTCAGATGGAGGTTccctatttttattttgtcatgctgtctttttgtgttgttgttgatgttgatgttgttgttgttattattattgttattaatattattattattaatgatattgttattattattgttatttagttCTCCTACTTTAAtgaaattgtaatgttttttttttctctctgccaATTTTCATATGAAATTTTGCCCTCCGTTGGCCTGCGATGCattttccattattattattattatttttttgtttcaagttCCTTtagaaaaaaaggaaacatacCAGTTTTTTAATGTCAGTAGACTTTTAGTTCTGCTCTGTTAATTAATAGTTGAgggaaaacaagcaaaaaaagttGTTTGCTCCCACGTTTTAGCAATTGACTTTAGAAGCGTGTAAAATTAACTGTACGTGGCAATGGCAGGGAGTCACCCAGAAATGAAATTGTCTGTTACAATGATTCAAGTGTTACTCAGGAAAATGTGTGGATGGCAAAACTGTAAGAAAGCATTAATTGAAGAGGCAGACGTTTGGCAAATACAAAGAGCTTTATCAGgagatgcatttttttaattcttctgaATGAGCACGACAAGTAGAAGACAAAAGCGCTGCCTGCTAAATTACACTGACACCACTTTCCACTTAGCTGTATAGAGATTATGGTACTTTTATGTCAATGTGAAATGCTCACATTCTCTTTCAGTAAGGgccatatatataaatatataaatatatatatttataagaatATCTGTAtgtaaattaacatttactcttTCTTGAGACTGGCAAGTGACTTGGATGGGGATAAGGAGGGATTGAGTCTGTGAAGGGAGGCCTGTGTCTGACAACGCATAACCCCTTCTCACCCTGTcctcctttctttttttcttttcttacctTGGATTGCAACGCCAAGGGCtgtacactagagggcgctgcatGCTAGCGTGTGAGTGCCTCTTGGCACAGGTCAGATCACGGGATTCTTCTGCGCCTGTCTGGCTTGCTCATCCCTCTCTCCCTCAGTCCACTCCTCCTTTACCTTCAGAGTCAGAAAGAATCCCATCTAGCACTTTTATGATCTGGTTCATTTTACATGGTGAATAAAATCACCCAGACAGATCATCACACAGAATGTGAACTGTGTAACTGACATGCCGTTTTTAAAAAGGGGGCAGTGGACAAACAGGCGGGAGTCATTTTAGTAAGTGTATAGATTATGTTGAAATGACCAGGGATAAATGGTCTTTCTAATGGAAAACTTTAGTTTCATTGGGAAGTGTTTGCTGGAATTTAGGGTGGGCTTTACTTGGGGTGGGAGTGTAGGGtgtcttattttatatttcattccCAGGTCTCATGGACATAGGTTAGTTATAAGGGGATTTTgtcttctttgtttattttatttttcaaatgttttgggtTGGGGAAATGTGCTGTGTGTTAAAACGGCCCCTGCTGTACCATGTTTTTGCCAGAGGTGACTTGTAAAAAGTCCCACTCTTAGTAATTTATATAGTTTTGGTCCTAAATTGACTGACTTACAGCCCAAAAGGAATTCAGCCAACCTATTGCAGCGTGCATGCAGGGCAAAGTATTACCTTGAACtacatttttctgtttattttgtactgtacaagtgttattgtaaaaaaaaataatgtttttatttgaacgATCAATAACTGTCTTCCATAATCACCATTGGCTGCTGTTACACTGTTGTTGAATTACTGTCATCcaatgatgttttttctttcatgtttATTTCTTCTACCAATCCCCGAAAGGACAGAACCACATGCAAGATTGTTTGTCAGACATCTTCTAGGGAGCACAGACCAACCACTAGGACTCATTTCTAAAGGTTGGGGTACTTTGTTCACAATAATGCtagtaataataatcaaaataatgagGAGTGTGATGGCTACGATGTAAGCACCACAGCTGATGATGTTTTTATACCTCATATCACCGATGACAGAAGCAGGGATATCAAAAAGTGACTATGTAGCATGACTGATGTGGCTACTGTTGAGAAGCGCCTCAAAATATTCCCTCGCCATTAAACTTGCCCTTTTTTATTACGCAGTTTGCTTTTAAATCGCTCTGCTGAGAGACTTCTCTGAACATTGATGTCTGGACTGCGCACAGAGAGAGTTTCTGAATACAAAAGCTTCTTAAAGTTGGCCACTTTTTAATGTTTTGGTAACTGTAAGGACGGGAGATCCAAAGAAGCTCTGAAACGACATCAAATTTATTCAACACAGGCAGTGCGAATGCTTACGTTTTGTTAAGAATTGATCGCGCTCCCtgcaataatgttttataatttgttttgtgtttgaatGCAGACCACTTCTAAAATATGGTTTCCAGTTTAATGTGTAAAGCCCTTTTAAAACCCTGTTAAACCTCGAATGATATCCTATTTGGCTTGAATAATGCCAGCCATCAATCTGTCAGTGGTTGCCACCTTAaggtcctgtttttttttttttcttttgccttCTTGCTGTATAATCCAGaaagtatttattttgtttacatacGGTTATAAACACTACATCAGATTCTTTTCCCATcattattcttctttttttgcatgtaaaataatgttttctttttgccCCCCTTTTGTCGCCATGCCAAATTTGTAGCTAATgatcttttttttcctctcctgTCTTATTTTATGGCAGATTCTTGTGATCTGATACACAGGACTATACCTGTCCATTTTGACTATTATTGATtaggaaaaacaataaaaatgctgGTATCA
>TCONS_00051890
ATGAGCCTGATCCAGGACAAACTTGGCAATGAGTTCCTCCGCTCCAATGGTGGCATGGAGCCAGGCTTCGGTGCGAGCATGCTCATGTTCAGCCACTTGCCCCCAGTTACTAGCTTCACCCGGCTGGCCAGTCAAACAGTTATGGCTGAACTGCAGCCCCATGAGATGATCTTGAAGAAGGAGCGGGACTCGCCAGACTGTGGAGCTGGAGGAGGACTCAATACTGGAGGCATGAAGGTTTCTGAACACGATTACAGACTGCCTCTCTATCCGGGGACTGGAACTGGAGCTGGAGTACGAAGTGGAGGAGAGTTGCTGGAGGTCTCTCTGGGGAACCATCAGAACCTTGTGGTGCACGACCTCAGTTTGGGAAACGTAAGTCTGTCAGGGCGGCTGGTAAAGGAATCCTCAGGGAGGAAAGGTCGAAGGTCAAACGGTGAGGGACAGGAGGCCAAAACACGGAGGAAACGAGGAGAATCGAAGTCAATGATGCTGGATCCAGATGGAGGGAGCTTGTCTCCGAACTCCAAACCGCACATCTGTGAGCACTGCAATGCAGCGTTCCGGAGCTCCTATCATTTACGCAGACATGTGCTTATACACACAGGTGAGAGGCCTTTCCGCTGTACGCAGTGTAACATGAGTTTCATTCAAAAATACCTCTTACAGAGACACGAAAAGATCCACAGTGGAGAGAAGCCATTCAGCTGTGACCAGTGCAACATGCGTTTTATTCAGAAGTATCACATGGAAAGACACAAGAGAACACATAGTGGAGAAAAGCCATACAAGTGTGACACCTGCCAACAGGTGTGTTTGTTccctatttttattttgtcatgctgtctttttgtgttgttgttgatgttgatgttgttgttgttattattattgttattaatattattattattaatgatattgttattattattgttatttagttCTCCTACTTTAAtgaaattgtaa

Function

symbol description
znf281a Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Orthologous to human ZNF281 (zinc finger protein 281).

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-131126-34 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Orthologous to human ZNF281 (zinc finger protein 281).

Ensembl:

ensembl_id ENSDARG00000000567

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051889 False 5603 mRNA 0.45 7 38762891 38783951
TCONS_00051890 True 969 mRNA 0.47 7 38765532 38777553

Neighbor

gene id symbol gene type direction distance location
XLOC_026633 si:ch211-198m17.1 coding downstream 17293 38705425 ~ 38745598 (-)
XLOC_026632 mpp3a coding downstream 69971 38647987 ~ 38692920 (-)
XLOC_026631 BX936420.1 coding downstream 233475 38525979 ~ 38529416 (-)
XLOC_026630 baxa coding downstream 977018 37776489 ~ 37785873 (-)
XLOC_026629 baxa coding downstream 989091 37766473 ~ 37773800 (-)
XLOC_026635 si:dkey-106c17.2 coding upstream 128606 38912557 ~ 38918717 (-)
XLOC_026636 NA coding upstream 187484 38971435 ~ 38975698 (-)
XLOC_026637 NA coding upstream 328363 39112314 ~ 39113547 (-)
XLOC_026638 svilc coding upstream 328947 39112898 ~ 39171968 (-)
XLOC_026639 cdk21 coding upstream 391909 39175860 ~ 39180048 (-)
XLOC_026626 NA non-coding downstream 1113502 37634100 ~ 37649389 (-)
XLOC_026625 NA non-coding downstream 1178084 37581522 ~ 37584807 (-)
XLOC_026621 CT573704.2 non-coding downstream 1687078 37075698 ~ 37075813 (-)
XLOC_026619 NA non-coding downstream 1790669 36969403 ~ 36972222 (-)
XLOC_026646 CU464118.1 non-coding upstream 587922 39371873 ~ 39454903 (-)
XLOC_026648 NA non-coding upstream 777833 39561784 ~ 39563301 (-)
XLOC_026651 BX322795.1 non-coding upstream 865494 39649445 ~ 39649562 (-)

Expression


Co-expression Network