LOC110531766 (LOC106577601)


Basic Information

Item Value
gene id LOC110531766
gene name LOC106577601
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 23877041 ~ 23886260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987616.1
gagaagaAGGCTGACCAAAAAGGGAAGAGACTAAACAGAGCGGAAAGAACCAAAGACAAACACTGAGAGCTCAGATCAAAGGGTTCCTTTAAGTACTCCTAGTGCTGTGTGCTTGGACCAAGACCTTTGTCATTATATACTAGGAGTGGGCTGAAAGAGAATGATATTTCACATCTGATTAtggccacacacacaaaaaaaacagATAGACGAGCAAACAACTACAGTTCTTCCGCACTGCAGTAATTATGTATGACTTGAGACCAGATGACCTGGAAGGTGCCATCGAGGAGAATAAGGAGCTGGGCAAAGCCATTCTGGAGATGCTGCACATCAATAAGCTGTCTGCACCCCATGTGGCCAAACCACACCCCTACATGAGACAGGTCTATCAGCTTCTGGACACACAAGAGGCCCGAGACTTGGGAAGCTCTGATGGAACACTGGTGCAGAGTTTCCGGAGTGTTCTGGCAGACCCACCGCATGCCCCCGCAGGATGGATCTGGTTCAACGTCTCCCACCTGAAGCCTTCTATGGCCGTGGCTGAGCTTGTCCTGCTCCGCAAGACCCTCCACCCCGACCCCCTCAGTGTCACAGTGTCCCTGCACAGCCTGACCCGGGGTGCGAGTGGCCTGAGCGTGAGCCCTCCCCTCGAGGAGAGGATCCTGACCCTGGATCAGCTACCCCTGTCTGGCTATGACGTGTTCGACGTGTCCCCCTTCATGTTCTCCTCCATGCCTCTGGACGTGGTGGGCTTCCAGCTGCGCTACACGGACGAGAGTGGGAGCCTGGTGCTTCATGAGGCCCTGACCCAGAGCCTCTACTGCCTGGGAGGTGGTTCCCTCAGCGAGCCCCTGCTGGTGGTGTACCGGGCTAGGCCGCTTCGCCCCCAGACGACGGCTGCCACCAATGGGTTCCGGCCTGAGCGGAGACAGCGCCAGCACTGCCGCACGAGGAGCCACGAGAGGAGGAGCCTCTTCCTGGCCAAACGAAATGGCTACAAGCGCCGCCGCTTTGATGCCAGCTCTGACCCTCAGTGTCGGCTCTATCACCGCTATGTTGACTTCAACAAGGGCGATCTGGCAAACTGGATCCTACAGCCGTCAGGGTTCAATGCTACCTTCTGCAGAGGTACCTGCCACATTGGGAATTCAGAAGTGTCCATAGAAGGATTTAGACCAAGGAAAATAtcacctgaggagagatcagtgaATAGCTCCAACTGTGTTCCACTGGAGCTGTCATCTCTCACCGTGATGTATAGGAGTGAAACGGATGACGTCATAATCCAGAAGTTTAGAGACGCAAGGGCAGAGAGCTGCACATGCCAGCCACAGGCTAAGCCTTGAAACCAGCTCCCACATACAGTATTTACCTATCCTAGCCACTGGAGGGCGAAATTGCTTATTGAATCTGAAGTAGGATGCCTGCTAGAAGACCGGCTAGTAGACCTGGGAGAAAAGGATTAGGGTCATGTTATGTTTTGAGAAATCTATGAACGAGGGTTGGTATGTTCTGGTGTGGTGGGTGAATAAAAAATACACTTGAAAAATGTTA
>XM_036987617.1
gagaagaAGGCTGACCAAAAAGGGAAGAGACTAAACAGAGCGGAAAGAACCAAAGACAAACACTGAGAGCTCAGATCAAAGGGTTCCTTTAAGTACTCCTAGTGCTGTGTGCTTGGACCAAGACCTTTGTCATTATATACTAGGAGTGGGCTGAAAGAGAATGATATTTCACATCTGATTAtggccacacacacaaaaaaaacagATAGACGAGCAAACAACTACAGTTCTTCCGCACTGCAGTAATTATGTATGACTTGAGACCAGATGACCTGGAAGGTGCCATCGAGGAGAATAAGGAGCTGGGCAAAGCCATTCTGGAGATGCTGCACATCAATAAGCTGTCTGCACCCCATGTGGCCAAACCACACCCCTACATGAGACAGGTCTATCAGCTTCTGGACACACAAGAGGCCCGAGACTTGGGAAGCTCTGATGGAACACTGGTGCAGAGTTTCCGGAGTGTTCTGGACCCACCGCATGCCCCCGCAGGATGGATCTGGTTCAACGTCTCCCACCTGAAGCCTTCTATGGCCGTGGCTGAGCTTGTCCTGCTCCGCAAGACCCTCCACCCCGACCCCCTCAGTGTCACAGTGTCCCTGCACAGCCTGACCCGGGGTGCGAGTGGCCTGAGCGTGAGCCCTCCCCTCGAGGAGAGGATCCTGACCCTGGATCAGCTACCCCTGTCTGGCTATGACGTGTTCGACGTGTCCCCCTTCATGTTCTCCTCCATGCCTCTGGACGTGGTGGGCTTCCAGCTGCGCTACACGGACGAGAGTGGGAGCCTGGTGCTTCATGAGGCCCTGACCCAGAGCCTCTACTGCCTGGGAGGTGGTTCCCTCAGCGAGCCCCTGCTGGTGGTGTACCGGGCTAGGCCGCTTCGCCCCCAGACGACGGCTGCCACCAATGGGTTCCGGCCTGAGCGGAGACAGCGCCAGCACTGCCGCACGAGGAGCCACGAGAGGAGGAGCCTCTTCCTGGCCAAACGAAATGGCTACAAGCGCCGCCGCTTTGATGCCAGCTCTGACCCTCAGTGTCGGCTCTATCACCGCTATGTTGACTTCAACAAGGGCGATCTGGCAAACTGGATCCTACAGCCGTCAGGGTTCAATGCTACCTTCTGCAGAGGTACCTGCCACATTGGGAATTCAGAAGTGTCCATAGAAGGATTTAGACCAAGGAAAATAtcacctgaggagagatcagtgaATAGCTCCAACTGTGTTCCACTGGAGCTGTCATCTCTCACCGTGATGTATAGGAGTGAAACGGATGACGTCATAATCCAGAAGTTTAGAGACGCAAGGGCAGAGAGCTGCACATGCCAGCCACAGGCTAAGCCTTGAAACCAGCTCCCACATACAGTATTTACCTATCCTAGCCACTGGAGGGCGAAATTGCTTATTGAATCTGAAGTAGGATGCCTGCTAGAAGACCGGCTAGTAGACCTGGGAGAAAAGGATTAGGGTCATGTTATGTTTTGAGAAATCTATGAACGAGGGTTGGTATGTTCTGGTGTGGTGGGTGAATAAAAAATACACTTGAAAAATGTTA

Function

NR:

description
bone morphogenetic protein 2-B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987616.1 False 1557 mRNA 0.53 6 23877041 23886260
XM_036987617.1 True 1554 mRNA 0.53 6 23877041 23886260

Neighbor

gene id symbol gene type direction distance location
LOC110532973 aco1 coding upstream 31930 23842478 ~ 23845111 (+)
LOC110531763 LOC106577738 coding upstream 37784 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 coding upstream 72230 23802151 ~ 23804811 (+)
LOC110531762 LOC106577606 coding upstream 81718 23791992 ~ 23795323 (+)
LOC110531760 LOC106577603 coding upstream 96765 23765275 ~ 23780276 (+)
tspan5a LOC106577600 coding downstream 517 23886777 ~ 23914624 (+)
LOC110531768 NA coding downstream 90270 23976530 ~ 23987341 (+)
LOC110531767 LOC106577598 coding downstream 108966 23995226 ~ 24013837 (+)
hacd4 hacd4 coding downstream 191620 24077880 ~ 24087340 (+)
mllt3 LOC106577592 coding downstream 262786 24149046 ~ 24197744 (+)
G784179 NA non-coding upstream 35562 23841255 ~ 23841479 (+)
G784176 NA non-coding upstream 43998 23832813 ~ 23833043 (+)
G784165 NA non-coding upstream 60863 23815849 ~ 23816178 (+)
G784097 NA non-coding upstream 68959 23807893 ~ 23808082 (+)
G784096 NA non-coding upstream 79118 23796210 ~ 23797923 (+)
G784262 NA non-coding downstream 107929 23994189 ~ 23994389 (+)
G784269 NA non-coding downstream 131644 24017904 ~ 24018141 (+)
G784277 NA non-coding downstream 139542 24025802 ~ 24026012 (+)
G784271 NA non-coding downstream 152367 24038627 ~ 24041484 (+)
gba3 LOC106577614 other upstream 769002 23105173 ~ 23111380 (+)
G783405 LOC106577615 other upstream 829996 23044007 ~ 23067530 (+)
G785138 NA other downstream 696127 24582387 ~ 24582877 (+)
LOC110531788 LOC106577570 other downstream 1044091 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 1641413 25525371 ~ 25532692 (+)
G786091 NA other downstream 1658971 25545231 ~ 25546967 (+)

Expression


Co-expression Network