Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531768 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 23976530 ~ 23987341 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053208.1 | False | 259 | mRNA | 0.56 | 3 | 23976530 | 23987341 |
| TU893125 | True | 223 | lncRNA | 0.56 | 3 | 23976557 | 23987332 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tspan5a | LOC106577600 | coding | upstream | 61906 | 23886777 ~ 23914624 (+) |
| LOC110531766 | LOC106577601 | coding | upstream | 90270 | 23877041 ~ 23886260 (+) |
| LOC110532973 | aco1 | coding | upstream | 131419 | 23842478 ~ 23845111 (+) |
| LOC110531763 | LOC106577738 | coding | upstream | 137273 | 23834071 ~ 23839257 (+) |
| LOC110531761 | LOC106577604 | coding | upstream | 171719 | 23802151 ~ 23804811 (+) |
| LOC110531767 | LOC106577598 | coding | downstream | 7885 | 23995226 ~ 24013837 (+) |
| hacd4 | hacd4 | coding | downstream | 90539 | 24077880 ~ 24087340 (+) |
| mllt3 | LOC106577592 | coding | downstream | 161705 | 24149046 ~ 24197744 (+) |
| LOC110531780 | bank1 | coding | downstream | 382488 | 24369829 ~ 24403607 (+) |
| LOC110531781 | LOC106577736 | coding | downstream | 469317 | 24456658 ~ 24484458 (+) |
| G784200 | NA | non-coding | upstream | 58200 | 23876331 ~ 23918330 (+) |
| G784179 | NA | non-coding | upstream | 135051 | 23841255 ~ 23841479 (+) |
| G784176 | NA | non-coding | upstream | 143487 | 23832813 ~ 23833043 (+) |
| G784165 | NA | non-coding | upstream | 160352 | 23815849 ~ 23816178 (+) |
| G784097 | NA | non-coding | upstream | 168448 | 23807893 ~ 23808082 (+) |
| G784262 | NA | non-coding | downstream | 6848 | 23994189 ~ 23994389 (+) |
| G784269 | NA | non-coding | downstream | 30563 | 24017904 ~ 24018141 (+) |
| G784277 | NA | non-coding | downstream | 38461 | 24025802 ~ 24026012 (+) |
| G784271 | NA | non-coding | downstream | 51286 | 24038627 ~ 24041484 (+) |
| G784382 | NA | non-coding | downstream | 185801 | 24173142 ~ 24173363 (+) |
| LOC110531760 | LOC106577603 | other | upstream | 197029 | 23765275 ~ 23780276 (+) |
| gba3 | LOC106577614 | other | upstream | 868491 | 23105173 ~ 23111380 (+) |
| G783405 | LOC106577615 | other | upstream | 929485 | 23044007 ~ 23067530 (+) |
| G785138 | NA | other | downstream | 595046 | 24582387 ~ 24582877 (+) |
| LOC110531788 | LOC106577570 | other | downstream | 943010 | 24872772 ~ 24952098 (+) |
| LOC110531825 | LOC106577732 | other | downstream | 1540332 | 25525371 ~ 25532692 (+) |
| G786091 | NA | other | downstream | 1557890 | 25545231 ~ 25546967 (+) |
