mllt3 (LOC106577592)


Basic Information

Item Value
gene id mllt3
gene name LOC106577592
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24149046 ~ 24197744 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987630.1
CATTCACAGCCCCTGACGCAGCTATAACATTCACTCTCAACGACCTTAATACAGCATCCACAGAAACAGCCACACTACTGCAGCCCAAACGTATAGCGAGGGTGCTGTTCAGGTGAAACTAGAACTTGGACATCGTGCCCAGGTCAGAAAGAAACCCACGGTGGAAGGCTTTACGCACGACTGGATGGTGTTTGTCCGAGGACCAGAGCACAGCAACATTCAGCACTTTGTGGAAAAAGTTGTTTTTCACCTGCACGAAAGCTTCCCAAGACCAAAAAGAGTGTGCAAGGATCCACCCTATAAAGTGGAGGAGTCTGGATACGCAGGCTTCATCTTGCCCATTGAAGTGTACTTCAGAAATAAGATGTCCCACTGCACCTCTCAGGAAGAACCTAAGAAAGTGCGCTTCGACTACGACCTGTTTCTACACTTGGACGGCCACCCGCCTGTCAATCACCTGCGCTGCGAGAAGCTCACCTTCAACAATCCCACGGAGGAGTTCCGCAGGAAGCTGCTTAAAGCCGGCGGGCAACGGGATCCTCACAAAAGAAGTTCGGACGACTCTCAAGTGATGGTAATGCAGGAGGGTTCCACATCTCTGTTTGGCCAGCACCTCAAGCTGCCCACCCTCCCCAGCAACTCCCTGACATTGACCTTCTCAGACGCTAAGAAAAGCAAGGCCTTCCCAGGGTCGAAGGACGGCTTCAAAGGATCTGACTCtctcctcaccaccaccaccaccaccaccagctcaTCCAAGCTCCACAAACCCTCCAAGGACTACAAGGACAAGCCTTTGAAAGAGCCCAAAAGTGCCTTCAGAGACTGTAGCAGGGAACCAAGCAAAGCCTCCAAAGATCCATCCAAGAAACCCAAAGAGAACCAGCCTCTTCGGGACAACCCCCCCATCCCCAAGATGGGCTTCAAGGAGCCCAAGGCCATGTCCAAGGAGCACCGGCAGGATGGGGGCTACTCGCACGGGGCTGGGAATGGGACAGGGACTAACAAGCGACTGTCCATCACCGACAGCGAGGACCACCTGACCAAAAAGCGCAAGAAGGGCTTCTCGGAGTTGACGTTAAAGCCGCCGGGGGGCTCGTTGCTGCCGTACCCCCAATCCCACTACTCGGAAAAGAAACTGCTGAAGGACAAATCCCAGGTGCGGCCCGCAAAAGTGCGGGTGGACGGCGGTGAGGCGCTGGGGGAGCGCAGGAAGGCGCCGACGCTACCTCCGTTCTCGGAGTTGAGGGACGCCAATGACTCCGACATGGAGGACAATATGTCCACCAAATCAGATtcGGAGCAGCCCAGTCCAGCCAGTTCAAGCTCTAGTTCCAGTTCAGGATTTGCAGCCAGCCACAAACGCCAAGTGGCTGAATTCGTCCGCAGGAAGGTAGGGGCCGTCCCTGCCACAGCCCACACAGtgTTGGGTCCCCTTCGTTCAATAATTCATGACCTGCACTCCGACGACAACGAGGATGATTCGGAGGAGGACGACAACGATGACAACGACATGGACTCTGACCTGGAGCGACCAATGCACACGCACATGACACACCGCCACCGCCGGGTCAGCCTGAGTGACGGCACTGAGAGTGAGAACAGCTCAGCGCCCTCTCCCCACTCTCGCCACGAGCCCCCGCCTTTAATAAACACCAGTAATAACCAGATACTGGAGGTGAAGAGCCCCATTAAGCAAACAAAGCAGGATAAGAATAAAAACATTGACTGTGACAAGGCTTACCTGGATGAGCTGGTGGAGCTACACAGACGACTGAtgacactgagagagaggcacATACTCCAACAGATAGTGAACCTCATCGAGGAGACTGGACACTTCCACATCACAAACACCACTTTTGACTTTGACCTCTGCTCCCTGGACAAAACTACGGTGCGGAAGCTCCAGAGTTACCTAGAAACGTCTGGAACGTCATGA
>XM_021615178.2
GCATGCGTCTTATTTTGCTCCTCAGCCTTTGAAACTCCGGGTTGAGTTCAATTAGGAGAGACCATGTCCGCCATCAGCCATATGCACTTCTCTATCTTCTCATTTAAAACAAATTCTCCATGAAATAGCGGTAGAACGCGGCCTCGAGAATGGCCACATCGGGTGCTGTTCAGGTGAAACTAGAACTTGGACATCGTGCCCAGGTCAGAAAGAAACCCACGGTGGAAGGCTTTACGCACGACTGGATGGTGTTTGTCCGAGGACCAGAGCACAGCAACATTCAGCACTTTGTGGAAAAAGTTGTTTTTCACCTGCACGAAAGCTTCCCAAGACCAAAAAGAGTGTGCAAGGATCCACCCTATAAAGTGGAGGAGTCTGGATACGCAGGCTTCATCTTGCCCATTGAAGTGTACTTCAGAAATAAGGAAGAACCTAAGAAAGTGCGCTTCGACTACGACCTGTTTCTACACTTGGACGGCCACCCGCCTGTCAATCACCTGCGCTGCGAGAAGCTCACCTTCAACAATCCCACGGAGGAGTTCCGCAGGAAGCTGCTTAAAGCCGGCGGGCAACGGGATCCTCACAAAAGAAGTTCGGACGACTCTCAAGTGATGGTAATGCAGGAGGGTTCCACATCTCTGTTTGGCCAGCACCTCAAGCTGCCCACCCTCCCCAGCAACTCCCTGACATTGACCTTCTCAGACGCTAAGAAAAGCAAGGCCTTCCCAGGGTCGAAGGACGGCTTCAAAGGATCTGACTCtctcctcaccaccaccaccaccaccaccagctcaTCCAAGCTCCACAAACCCTCCAAGGACTACAAGGACAAGCCTTTGAAAGAGCCCAAAAGTGCCTTCAGAGACTGTAGCAGGGAACCAAGCAAAGCCTCCAAAGATCCATCCAAGAAACCCAAAGAGAACCAGCCTCTTCGGGACAACCCCCCCATCCCCAAGATGGGCTTCAAGGAGCCCAAGGCCATGTCCAAGGAGCACCGGCAGGATGGGGGCTACTCGCACGGGGCTGGGAATGGGACAGGGACTAACAAGCGACTGTCCATCACCGACAGCGAGGACCACCTGACCAAAAAGCGCAAGAAGGGCTTCTCGGAGTTGACGTTAAAGCCGCCGGGGGGCTCGTTGCTGCCGTACCCCCAATCCCACTACTCGGAAAAGAAACTGCTGAAGGACAAATCCCAGGTGCGGCCCGCAAAAGTGCGGGTGGACGGCGGTGAGGCGCTGGGGGAGCGCAGGAAGGCGCCGACGCTACCTCCGTTCTCGGAGTTGAGGGACGCCAATGACTCCGACATGGAGGACAATATGTCCACCAAATCAGATtcGGAGCAGCCCAGTCCAGCCAGTTCAAGCTCTAGTTCCAGTTCAGGATTTGCAGCCAGCCACAAACGCCAAGTGGCTGAATTCGTCCGCAGGAAGGTAGGGGCCGTCCCTGCCACAGCCCACACAGtgTTGGGTCCCCTTCGTTCAATAATTCATGACCTGCACTCCGACGACAACGAGGATGATTCGGAGGAGGACGACAACGATGACAACGACATGGACTCTGACCTGGAGCGACCAATGCACACGCACATGACACACCGCCACCGCCGGGTCAGCCTGAGTGACGGCACTGAGAGTGAGAACAGCTCAGCGCCCTCTCCCCACTCTCGCCACGAGCCCCCGCCTTTAATAAACACCAGTAATAACCAGATACTGGAGGTGAAGAGCCCCATTAAGCAAACAAAGCAGGATAAGAATAAAAACATTGACTGTGACAAGGCTTACCTGGATGAGCTGGTGGAGCTACACAGACGACTGAtgacactgagagagaggcacATACTCCAACAGATAGTGAACCTCATCGAGGAGACTGGACACTTCCACATCACAAACACCACTTTTGACTTTGACCTCTGCTCCCTGGACAAAACTACGGTGCGGAAGCTCCAGAGTTACCTAGAAACGTCTGGAACGTCATGA
>XM_036987629.1
GCATGCGTCTTATTTTGCTCCTCAGCCTTTGAAACTCCGGGTTGAGTTCAATTAGGAGAGACCATGTCCGCCATCAGCCATATGCACTTCTCTATCTTCTCATTTAAAACAAATTCTCCATGAAATAGCGGTAGAACGCGGCCTCGAGAATGGCCACATCGGGTGCTGTTCAGGTGAAACTAGAACTTGGACATCGTGCCCAGGTCAGAAAGAAACCCACGGTGGAAGGCTTTACGCACGACTGGATGGTGTTTGTCCGAGGACCAGAGCACAGCAACATTCAGCACTTTGTGGAAAAAGTTGTTTTTCACCTGCACGAAAGCTTCCCAAGACCAAAAAGAGTGTGCAAGGATCCACCCTATAAAGTGGAGGAGTCTGGATACGCAGGCTTCATCTTGCCCATTGAAGTGTACTTCAGAAATAAGATGTCCCACTGCACCTCTCAGGAAGAACCTAAGAAAGTGCGCTTCGACTACGACCTGTTTCTACACTTGGACGGCCACCCGCCTGTCAATCACCTGCGCTGCGAGAAGCTCACCTTCAACAATCCCACGGAGGAGTTCCGCAGGAAGCTGCTTAAAGCCGGCGGGCAACGGGATCCTCACAAAAGAAGTTCGGACGACTCTCAAGTGATGGTAATGCAGGAGGGTTCCACATCTCTGTTTGGCCAGCACCTCAAGCTGCCCACCCTCCCCAGCAACTCCCTGACATTGACCTTCTCAGACGCTAAGAAAAGCAAGGCCTTCCCAGGGTCGAAGGACGGCTTCAAAGGATCTGACTCtctcctcaccaccaccaccaccaccaccagctcaTCCAAGCTCCACAAACCCTCCAAGGACTACAAGGACAAGCCTTTGAAAGAGCCCAAAAGTGCCTTCAGAGACTGTAGCAGGGAACCAAGCAAAGCCTCCAAAGATCCATCCAAGAAACCCAAAGAGAACCAGCCTCTTCGGGACAACCCCCCCATCCCCAAGATGGGCTTCAAGGAGCCCAAGGCCATGTCCAAGGAGCACCGGCAGGATGGGGGCTACTCGCACGGGGCTGGGAATGGGACAGGGACTAACAAGCGACTGTCCATCACCGACAGCGAGGACCACCTGACCAAAAAGCGCAAGAAGGGCTTCTCGGAGTTGACGTTAAAGCCGCCGGGGGGCTCGTTGCTGCCGTACCCCCAATCCCACTACTCGGAAAAGAAACTGCTGAAGGACAAATCCCAGGTGCGGCCCGCAAAAGTGCGGGTGGACGGCGGTGAGGCGCTGGGGGAGCGCAGGAAGGCGCCGACGCTACCTCCGTTCTCGGAGTTGAGGGACGCCAATGACTCCGACATGGAGGACAATATGTCCACCAAATCAGATtcGGAGCAGCCCAGTCCAGCCAGTTCAAGCTCTAGTTCCAGTTCAGGATTTGCAGCCAGCCACAAACGCCAAGTGGCTGAATTCGTCCGCAGGAAGGTAGGGGCCGTCCCTGCCACAGCCCACACAGtgTTGGGTCCCCTTCGTTCAATAATTCATGACCTGCACTCCGACGACAACGAGGATGATTCGGAGGAGGACGACAACGATGACAACGACATGGACTCTGACCTGGAGCGACCAATGCACACGCACATGACACACCGCCACCGCCGGGTCAGCCTGAGTGACGGCACTGAGAGTGAGAACAGCTCAGCGCCCTCTCCCCACTCTCGCCACGAGCCCCCGCCTTTAATAAACACCAGTAATAACCAGATACTGGAGGTGAAGAGCCCCATTAAGCAAACAAAGCAGGATAAGAATAAAAACATTGACTGTGACAAGGCTTACCTGGATGAGCTGGTGGAGCTACACAGACGACTGAtgacactgagagagaggcacATACTCCAACAGATAGTGAACCTCATCGAGGAGACTGGACACTTCCACATCACAAACACCACTTTTGACTTTGACCTCTGCTCCCTGGACAAAACTACGGTGCGGAAGCTCCAGAGTTACCTAGAAACGTCTGGAACGTCATGAGGTCTTGGAGCTGCTGGCTGTTGCAAGGAACAATGTTGGAAGAACTTAGGAATCTTCCTCTTTTGTTCCCCCCCACTCCCCAAAAATGTACTTTTCACTGCAACGCAAAAAGATGACCTGCCACGGCCGGGCCCTGCCCCGGGTCTTAGTGCCTGGCCTTCTGGTCGCTCCACAATGCTCGTTGGATCTTGTCTCTCCACGCGACCAGGGTAGCCCGTAAGCACAGACCGGATCGGCGTGTCGTGTCACCCTGGAGATGAGTCCTGTCGACCAGGAATATCACCCAGAAAGCCTTGAAAAATTCCAcagttcacaaaaaaaaaacgtgGTAAAGAAACAGTGACCTTGCTTTTAAAACTAATGTGCATATTATTACCATGTATTGAATTTTTTGGCGTTCTTTGTGATGAATGGTGCATGTTCAACACTGCCTTACCACGTTTGTCGGTCTTTATttattgaggtgtgtgtgtgtgtgtgtgtgagagagagagagaatagcaaCACTGAGTTAGTCTTGTGCAAGCACTTCACAACATGCATCTCTCTGGCTCTGGAAGGACGGTGGAGCAGCGCGTTGTCATCACAACGTTAAGATTTAAATTATCTTGTGACGGATGACTTGAATGGCAATCAAACGTCCCTCTATATGAAGACGGCaactctaccctctcctccaaAACAATAATTGTTATCAGTGCCCACCGGTACGAGCTGAAGACAAATCATGAACTCAAATTGTTGAAATTAACACAATTGTATATTCCATTCTTGGTACCAAATCTTTAATTGATGTATTGGACAATGACGAGGCAAATTTCCAAAGTGTGCTGCATGTTGTTTTTACAAGCTCTCACTTGTATTCCGCTGCTCAAGTTGAAACCAAGCCTAGTGTTTGATCAATCTattctgccctaccaagcaaaaaggcattAACTGCTCATAGCGTGGAACTGATAGAAATGGCTTTTATTTACCtttggtttcacagtaacttcatgcagttactgctaacatgacccccattttctacaaaatacaatagagacaggatacatgtccacatgattaagcatgtataTGTTgcaaaaataacacattttcaaccaaatgagcagttactgccttttttgCTTGGTTGGGCAGTATTGTAAGCAGGCCTGAGCTAAAATAACTATTTTGAATCCTGGAATTTTAGGAGGAAAAATTGTACTCTTACGTATGTAAGACTGAATCTTATTTATTTCACGGTGACCTCCGTTGCCAAATCAAAGTTGTGCATTAGAATTGAGAACTGAActgatttattttttttgtgtaacTTTGTCCTTTTTGCTAACCTGAGGAGTTGAAGTTAATTTTGTCTGCTGAGAGCGATGCCTCAACAGGAATACCAGTGGTTGTAGCTGCTCACAGGGCCACGCAAAGGCAGAATATGTTGCATTTTTTTCTTGACCAATGTCAGTCTTATGAGTTTGTGTATTCTTAGGACATACAATACAAATGCTGTGTTTTGTACAGATGAGAACATGTGCAACCTGTGGTAAAAATAGTTAGTCACTGTAAATgtaacattttttgtttgttttgactTTGTTGCAATGCCATTTTGtaatttctcttttttttttttttttgtcgaaGCCCAAAGATTTTGGTTTTGGTTGGGATATTGTTTATTTGTATATAAACGTTGTGATTATTAATGTCATCTTTCATTTCTTGGAGGGTTggaaaaaatataacattttggtATTTTAAACAATGGTAGCTTACAATCATGTGTTTTAGTCAAAGCTATAACTGGCTTCTGGTGGATCCACAACATGCAGCAAATTTTTTGGGTTGATTTCATCACTATTCTTGACTATCTTCTAATTAGTCTGCCATTTGAATTGTATAACTAAATGACCACACTGCTCCCCCCATGTTTCTAATTTGGGAGGGCAACACGATTACTTCCTgtatacacagagtgtacaaaacattaggaacaccttcctaatattgagttgcaccccccttttgccctcagaacagcttcaattcgtcagggcatggactctataaggtgtcaagcgttccacagggatgctggcccgtgttgacttaaaccggtgcgcctggcacctactaccataccctgttcaaacacaaatattttgtcttgacAATTCTCCTTCTGAATACCAcacacaatccatttctcaaggcttaaaaatccttgaacttgtctcctcccctttatctacacgaattgaagtgacatcaataagggatcataggattcacctggtcagtcttatggaaagagcaggtgtttgtAATTTTTTGTAGACTTAATGTATATGAATGCTTCTATTTGGAGAGAAGTGAGTGCTGGGAATAGTTatacaatactttttttttttcaaaaggaCGTGTCTGTTCAGGATGGCGCAACGTTACAGAACAATAGGCATAGGCAGTCATTTCTGCTCTACAGTATACATTGCATTTCTATCTGCATCATTCAAACATTTCGCCCTATTGAATACACCCCCTCGGTTATCATCTGTATATCTAGCACTAGCAGTCATCTCAATCTCCCGTCTCTTGCCTCTTGAGATGTATGGGGGGGGTACATGAGGTTGCAATGTAGTGCAGTTCTGTGTTGGGTTGAATGTGGAACTTATTGTCTCAGTCTCTGCTGTCAGTTCTACCAGATCTGACCCATTTACTGTGTGTTTTCAACTTGCAGACTATTTCCTATAAAATGCACAGTTGCAATTCCTTTTTGTGAGGACATTGTGTTTTGTGTGGTTCAAGGTTTCATTCATGTCACTGAAATCCAATGACAAAGTGATCATTTGATTACCCTAGTTTTCTTCAACTAGCCACTAAGTACTGTATAAACGCCACTATTCCTTTTAAACAAAGTGTTGATTTATTTCTCAGTGGATCTTCAAATGCCCAGTGTTTCAGGATGTTTTGAATCCTGAATCTTCGAGACAAAGTAAATGGGTAGCCTTTTCCAGGCCGTGGGGGAGGAGCCCACAGTATGTGCCGTTTCTGTAGCATGAGAAGTACACTCCCTGAACAGGACCCTAGTTTATCACTGAGACATAACTGTAAAAGGGGAAAAGTTCATGAACCATTTATTTTTATACATAACACAGGTCTCAGGTCAGAATGTTGATCCCCTCTTTTAATTAGCTGACACGATTTGTGCAGCACGTGGTTTTTAGGTTTGTCAATGTAGGTGGTCGGACAAACGCTTGGAAGGCATCCAGACTCCCCATTTTGTGGCGGGGATGGGGAAGTATCATGCTCAAGCCTTTTATCAGGGAAATAACCTTTTTAAAATAGGATTTTCAGCTCGTGTTCACTGTATT

Function

NR:

description
protein AF-9 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987630.1 False 1942 mRNA 0.54 14 24149046 24194370
XM_021615178.2 False 1982 mRNA 0.54 14 24155017 24194370
XM_036987629.1 True 5377 mRNA 0.45 14 24155017 24197744

Neighbor

gene id symbol gene type direction distance location
hacd4 hacd4 coding upstream 61706 24077880 ~ 24087340 (+)
LOC110531767 LOC106577598 coding upstream 135209 23995226 ~ 24013837 (+)
LOC110531768 NA coding upstream 161705 23976530 ~ 23987341 (+)
tspan5a LOC106577600 coding upstream 234422 23886777 ~ 23914624 (+)
LOC110531766 LOC106577601 coding upstream 262786 23877041 ~ 23886260 (+)
LOC110531780 bank1 coding downstream 172085 24369829 ~ 24403607 (+)
LOC110531781 LOC106577736 coding downstream 258914 24456658 ~ 24484458 (+)
LOC110531785 plap coding downstream 403590 24601334 ~ 24624296 (+)
LOC110531793 LOC106577583 coding downstream 522281 24720025 ~ 24726878 (+)
LOC110531798 LOC106577580 coding downstream 537921 24735665 ~ 24770025 (+)
G784271 NA non-coding upstream 107562 24038627 ~ 24041484 (+)
G784277 NA non-coding upstream 123034 24025802 ~ 24026012 (+)
G784269 NA non-coding upstream 130905 24017904 ~ 24018141 (+)
G784262 NA non-coding upstream 154657 23994189 ~ 23994389 (+)
G784365 LOC103399096 non-coding downstream 9432 24207176 ~ 24208822 (+)
G784387 NA non-coding downstream 48904 24246648 ~ 24248520 (+)
G784437 NA non-coding downstream 78300 24276044 ~ 24278695 (+)
G784980 NA non-coding downstream 225259 24423003 ~ 24423272 (+)
G784995 NA non-coding downstream 234211 24431955 ~ 24432190 (+)
LOC110531763 LOC106577738 other upstream 309932 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 344909 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 369545 23765275 ~ 23780276 (+)
gba3 LOC106577614 other upstream 1041007 23105173 ~ 23111380 (+)
G785138 NA other downstream 384643 24582387 ~ 24582877 (+)
LOC110531788 LOC106577570 other downstream 732607 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 1329929 25525371 ~ 25532692 (+)
G786091 NA other downstream 1347487 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 1515253 25712997 ~ 25742909 (+)

Expression


Co-expression Network