LOC110531776 (ddit4l)


Basic Information

Item Value
gene id LOC110531776
gene name ddit4l
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24224829 ~ 24228209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615182.2
gatgttagccagttagcttgggtgcttgactgccgttgaggtcagaacgctcgggtcagccctactcctcggccagagcgtccactGTGCCGCTCGgaagcgaaacgctctgaatttacgaacgtcTAGGGAGCGCGCTTTGGCACTCCAGATTTAATTTACGAAGATCTTAACACACtttaaaaaaggaactaagggtTGTCGCCATGGTTGCTACAAGCAAACTGAAGAGTAAAAACCCGGAATTCATATCAGAATTGATTGACCGTAGATACGACCAGACTTGTATTGAAAATGAGCTGGATTCCTGGGACCACTGTTTGGCTGAGCCCCACCTGAATGTGGAGGTGTCTGAGGACAGGACGTGTCAGCAGTTGGCCAAGATGTTAGAGAACTGTCTGTCACGGGCCAAGAAGACCACCATGCGTTGCTCTAAGGTGCTGGTCCCTGAGACGCTGACTCTGAGGATAGCACGCGATGTACTGCGCCTGTCGTCGGGCGAGCCGTGCGGCCTACGCGGCTGTGTACTCTACGTGCACCTGGAGCAGGAACAGTGCTGTAAGCAGCTGGAGCGCATCGTGTACAATGCAGACGTTGTGCCCACCTTTGAGCTGACGTTGGTGTTCAAGCAGGACTGTAGCGCATGGCCCAGTCTCAGGGACTTCCTGCACATTGGTGCGTGTTTCACTCCAGGCTTCAGGCATGCGCTCAAACTCAGTCCTGGCTTCCGGCTCATCAAGAAGAAGCTCTACTCATCCTTGGCTGGTACTGTGGTAGAGGAGTACTGAGAAGGGGGAAATTGAGGAAGGTGGGACACCATGGTTCAGTCAGCTGTCCTTGGGGTGGCATGTACAATGCTTTTCACTCCTGGAGGGTCTAATTTTCTACATGTTTTTTTGTATGAATACAGTTTGTGAACGAGTAGTGTTGTGCAAAGGTTATTGTTGTCCTGTCTGTTCCAATGTCCAGGATTCTACAACTGATTACTCAAAGTGGACGGACAAGTCTTGGTTACTGTAATGGATTGTCAAATGCCTAAACAAGATTagcataactttttttttttgactTCACTTCACTTTGAACAAACTTTGCCAATCCGTTTGTTTCCAGATTTGTCCACTGCTGTGCAGCAAAGTAAACCCACCTAGAGGCTATAGGAACAGGACTTGGAAAAGTTTGGGGGGGCCATAATGTTGGTGTTCAATGCTGAATTGAGGGTATGTAAGTGTTTGTTAGCGAGCCATTGAATGTTTGTCCTTGTGAACATGCTGCTCATTGACGGGCTCCAACCTTGACGGATGCCTTAAACTGCCACTTAGATCTTTCTTCATCTAAATGTTTTTTCTTACACTTGTTAGATCCTAGCTCCACAGGGGTTCTTCAGGGCTTGTTCTTTTTATACCTTTCTCAATTGATGGCTGTTTAAACTTAGGATTTTTTTGTTTAGTTGAGATTCCTGTTAAAGGCAATGGCAATCTTGTCTTTGAcaattaaacattttaaaccta
>XM_021615181.2
CTGTGAGGAGAAGAGTATAAATACCCCCAACAGGTTGCTCTAGCTGTAGGCAGTGTTCATGTTTGTGGGAGGTGTATTGGGTTGTAGCCTATGTGGGGAAAGTATAATAGAgcctttataaaaaaaatatataatttatattGAACAAACATAGCAAGCACtttaaaaaaggaactaagggtTGTCGCCATGGTTGCTACAAGCAAACTGAAGAGTAAAAACCCGGAATTCATATCAGAATTGATTGACCGTAGATACGACCAGACTTGTATTGAAAATGAGCTGGATTCCTGGGACCACTGTTTGGCTGAGCCCCACCTGAATGTGGAGGTGTCTGAGGACAGGACGTGTCAGCAGTTGGCCAAGATGTTAGAGAACTGTCTGTCACGGGCCAAGAAGACCACCATGCGTTGCTCTAAGGTGCTGGTCCCTGAGACGCTGACTCTGAGGATAGCACGCGATGTACTGCGCCTGTCGTCGGGCGAGCCGTGCGGCCTACGCGGCTGTGTACTCTACGTGCACCTGGAGCAGGAACAGTGCTGTAAGCAGCTGGAGCGCATCGTGTACAATGCAGACGTTGTGCCCACCTTTGAGCTGACGTTGGTGTTCAAGCAGGACTGTAGCGCATGGCCCAGTCTCAGGGACTTCCTGCACATTGGTGCGTGTTTCACTCCAGGCTTCAGGCATGCGCTCAAACTCAGTCCTGGCTTCCGGCTCATCAAGAAGAAGCTCTACTCATCCTTGGCTGGTACTGTGGTAGAGGAGTACTGAGAAGGGGGAAATTGAGGAAGGTGGGACACCATGGTTCAGTCAGCTGTCCTTGGGGTGGCATGTACAATGCTTTTCACTCCTGGAGGGTCTAATTTTCTACATGTTTTTTTGTATGAATACAGTTTGTGAACGAGTAGTGTTGTGCAAAGGTTATTGTTGTCCTGTCTGTTCCAATGTCCAGGATTCTACAACTGATTACTCAAAGTGGACGGACAAGTCTTGGTTACTGTAATGGATTGTCAAATGCCTAAACAAGATTagcataactttttttttttgactTCACTTCACTTTGAACAAACTTTGCCAATCCGTTTGTTTCCAGATTTGTCCACTGCTGTGCAGCAAAGTAAACCCACCTAGAGGCTATAGGAACAGGACTTGGAAAAGTTTGGGGGGGCCATAATGTTGGTGTTCAATGCTGAATTGAGGGTATGTAAGTGTTTGTTAGCGAGCCATTGAATGTTTGTCCTTGTGAACATGCTGCTCATTGACGGGCTCCAACCTTGACGGATGCCTTAAACTGCCACTTAGATCTTTCTTCATCTAAATGTTTTTTCTTACACTTGTTAGATCCTAGCTCCACAGGGGTTCTTCAGGGCTTGTTCTTTTTATACCTTTCTCAATTGATGGCTGTTTAAACTTAGGATTTTTTTGTTTAGTTGAGATTCCTGTTAAAGGCAATGGCAATCTTGTCTTTGAcaattaaacattttaaaccta

Function

symbol description
ddit4l Predicted to be involved in negative regulation of signal transduction. Predicted to be located in cytoplasm.

NR:

description
DNA damage-inducible transcript 4-like protein

GO:

id name namespace
GO:0009968 negative regulation of signal transduction biological_process
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615182.2 False 1511 mRNA 0.47 3 24224829 24227736
XM_021615181.2 True 1494 mRNA 0.45 3 24224829 24228209

Neighbor

gene id symbol gene type direction distance location
LOC110531775 LOC107706756 coding downstream 15849 24206453 ~ 24208980 (-)
focad focad coding downstream 73950 24087421 ~ 24150879 (-)
c9h4orf54 LOC106577596 coding downstream 175088 24038626 ~ 24049741 (-)
trmt10a LOC106577597 coding downstream 201139 24020010 ~ 24023690 (-)
LOC110532975 LOC106577599 coding downstream 249275 23916608 ~ 23975554 (-)
LOC110531777 LOC106577588 coding upstream 18442 24246651 ~ 24258979 (-)
LOC110531778 NA coding upstream 41905 24270114 ~ 24367630 (-)
LOC110531782 LOC106577586 coding upstream 263111 24491320 ~ 24585820 (-)
LOC110531784 LOC106577585 coding upstream 365157 24593366 ~ 24601145 (-)
LOC110531786 LOC106577584 coding upstream 402488 24630697 ~ 24705729 (-)
G784852 LOC106577592 non-coding downstream 47362 24176911 ~ 24177467 (-)
G784848 NA non-coding downstream 55238 24169380 ~ 24169591 (-)
G784839 NA non-coding downstream 68770 24155790 ~ 24156059 (-)
G784767 NA non-coding downstream 181565 24042826 ~ 24043264 (-)
G784981 NA non-coding upstream 195528 24423737 ~ 24424584 (-)
G784987 NA non-coding upstream 199997 24428206 ~ 24428473 (-)
G785323 NA non-coding upstream 363090 24591299 ~ 24591527 (-)
G785329 plap non-coding upstream 389985 24605485 ~ 24619053 (-)
G785370 LOC106577580 non-coding upstream 513418 24741627 ~ 24765206 (-)
frem1a frem1 other downstream 377399 23845242 ~ 23876940 (-)
G784651 NA other downstream 416557 23806558 ~ 23808272 (-)
G784652 NA other downstream 423145 23800783 ~ 23801684 (-)
G784602 NA other downstream 485316 23737221 ~ 23739513 (-)
G785578 NA other upstream 734863 24963072 ~ 24965274 (-)
G787211 NA other upstream 1062706 25290915 ~ 25291471 (-)
trmt44 trmt44 other upstream 1065980 25294038 ~ 25309252 (-)
LOC110531812 LOC106577560 other upstream 1127145 25338581 ~ 25365749 (-)

Expression


Co-expression Network