LOC110531785 (plap)


Basic Information

Item Value
gene id LOC110531785
gene name plap
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24601334 ~ 24624296 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615206.2
TACTTAACCGGACGATTTCTTCTTGACAAGGGGTGCCTCTTTTCTCTTTAGAAGTTACGATTACAACATTGTGATATTGGTGATACAATGGCATCACCTAACTCATATAAACTAAGCTGCTCCATACCTGGCCATGAAATGGATGTTAGAGGTCTTGCAGCTGCTTTTTTCCCTGACGGAGCCTTTACGTCTGTTTCCAGAGACCGAACCGGAAGGGTCTGGGTACCAAACTCAAGCCCAGACAGGGGTTTCACAGAAATGCATTGTATGACAGGCCATGAGAACTTTGTATCCTGTGTATGCATAATCGCTCCCAGCGACACGTATCCTCGGGGACTCATAGCCACAGGTGGAAACGACCACAACATCTGTGTTTTCACACTGGACCAACCACAACCATTGTTCACACTCAAGGGACACAAAAACACAGTGTGTGCACTGTCCTCTGGGAAGTTTGGAACACTACTGAGTGGCTCTTGGGACACCACAGCAAAAGTCTGGCTCAACGAGAAGTGCATGATGACCTTACAGGGACACACAGCAGCAGTGTGGGCGGTGGTCATATTACCTGAACAAGGCCTCATGCTGTCTGGATCAGCTGACAAGACCATCAAGCTGTGGAAGGCTGGACGTTGTGAGAAGACGTTTACAGGTCATGAGGACTGTGTCAGGGGGCTAGCGGTGGTCAGCGACCTGGAATTCTTCTCCTGTAGCAACGACGCCACTATCAGGAGATGGCTAGTGACTGGAGAATGTGTGCAAGTGTACTACAGCCATACCAACTACATCTACAGCCTGGCCGTTTTCCCCAATGGACAAGATTTCGTAAGCACAGGAGAGGACCGGACCTTGAGGATATGGAAGCAGGGCGACTGCCAACAGACCATCCGTCTCCCAGCCCAGTCCGTGTGGTGCTGTTGCATCCTGCCTAACGGGGATATAGCTGTGGGCGCCAGTGACGGCCTCATCAGAGTGTTCACTGAGGTGGAAGATCGTATGGCTAGCCCCCAGGACCTCCAGGCCTTCGAGGATGAGCTCTCCAAGACCACCATCGACCCCAAGACAGGGGACCTGGGGGACATCAAGATGGAGGATCTTCCAGGAAGGGAGCACCTCGAGGAGCCTGGGAACCGGGACGGCCAGACACGGCTTATCAAAGAGGGCCAGAACGTGGAGGCGTACCAGTGGAGCGTGGCTGACAGCCGCTGGATGAAGATTGGAGATGTGGTGGGAGGGTCCAACCAGCAGACCTCCAAGAAAGTCAACTATGAGGGGAAGGAGTACGACTTTGTCTTCACCATCGACATCAACGAGGGTGGCCCGTCCATGAAGCTGCCCTACAACGTGACAGACGACCCCTGGCTGACAGCCCACAACTTCCTGGAGAAGAACGAGCTCAGCCCCATGTTCCTGGACCAGGTGGCCAACTTCATCATCGAAAACACCAAAGGACACACCTTGGGAGCCGCCGCGCCCAGCGCTGCTGACCCATTCACTGGCTCAGGCCGATACATTCCTGGAGCTGCTGACAACAGAGCAGGCTTTGGGGCTGACCCCTTCACAGGCACTGGGCGGTACATCCCAGGATCGGGGACTCCTACAGGGGCTCCGGTGGGCGTGGCAGACCCCTTCACAGGTGAGGGTGCCTACTCCTCGGCTGCCTCGAGGCAGACCTCCACAAACATCTACTTTCCAAAAACGGACGGTGTGACTTTCGAGCAGGCTAACGCCACACAGATAATGGCCAAGCTGAAGGAGCTGAATGGTGGGGCCCCTGGGGAATACAGGCTGTCTGAGGAGGTCCTGGAGAGCCTGGAGAAACTgctggtgtctgtctgtaaccCCTGTGCCTCAGAGCAGCCCACCACAGAGCAGATCAGCCTGCTCTGGAAGACCTCCCACTGGCCAGAAGACATAGTCTTCCCCGTCCTGGACATCCTGCGGCTGGCGGTGCGCCACCCGCAGGTCAACGACAGCCTGTGCGGTGGCGACACGGATGATGGCGTGGCGCTCTGCAACCACCTGCTGAGCCTGATGAAGCCTCAGGGTCGGCCAGCCAATCAGATGCTGGCATTGCGGACACTGTGCAACTGCTTCAGTGGCTGGCGAGGCCGGGCCCTCCTATTGGCCCAACGGGAAGCTGTCCTGTCCCACGCCGCCGACCTCTGCTCTGTTTGCAACAAGAACATTCACATCGCCCTCGCGACTCTCGTTCTCAACTACGCTGGCTCACTCCACGGCCAGCCCGACCTGGAGGCCAAGGCCCAGTGTCTGTCGGTGGCCAGCGCGGCACTGGAGTCGGTGCAGGACAAGGAGGCAGTGTTCAGGCTCCTGGTGGCTCTGGGGACCACAGTGGCCTCTGACCAGACAGCCCAGGACCTGGCCAAGTCACTGGGGGTCATGTCACAGATCGCCAAGTACACCTCGGTCACCGACCCGGCCAAGGTCGGCGAGTGCTGCCAGCTGGTTTTAAAAGAACTGCAGTGATCTGATTTCCTGTGACTTCAAACACATTGgtttcccctttcctctccttatATTATTACTAGTCTCTGTTCAAGTGTTTAATTGACTTTTGAGACTATTGGATTGCATGTGCTGCAATAAAAATATGTACAAATTGGATCTTTCA

Function

symbol description
plap Predicted to enable ubiquitin binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and ubiquitin recycling. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including adult head; embryonic brain; embryonic/larval nervous system; and extended germ band embryo. Orthologous to human PLAA (phospholipase A2 activating protein).

NR:

description
phospholipase A-2-activating protein-like

GO: NA

KEGG:

id description
K14018 PLAA, DOA1, UFD3; phospholipase A-2-activating protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615206.2 True 2632 mRNA 0.56 14 24601334 24624296

Neighbor

gene id symbol gene type direction distance location
LOC110531781 LOC106577736 coding upstream 116876 24456658 ~ 24484458 (+)
LOC110531780 bank1 coding upstream 197727 24369829 ~ 24403607 (+)
mllt3 LOC106577592 coding upstream 403590 24149046 ~ 24197744 (+)
hacd4 hacd4 coding upstream 513994 24077880 ~ 24087340 (+)
LOC110531767 LOC106577598 coding upstream 587497 23995226 ~ 24013837 (+)
LOC110531793 LOC106577583 coding downstream 95729 24720025 ~ 24726878 (+)
LOC110531798 LOC106577580 coding downstream 111369 24735665 ~ 24770025 (+)
LOC110531796 LOC106577576 coding downstream 156571 24780867 ~ 24783674 (+)
LOC110531804 NA coding downstream 170317 24794613 ~ 24795514 (+)
LOC118966018 NA coding downstream 171357 24795653 ~ 24800154 (+)
G785033 NA non-coding upstream 115785 24485101 ~ 24485549 (+)
G785046 NA non-coding upstream 125270 24475761 ~ 24476064 (+)
G785026 NA non-coding upstream 149262 24451800 ~ 24452072 (+)
G785021 NA non-coding upstream 154182 24446865 ~ 24447152 (+)
G784995 NA non-coding upstream 169144 24431955 ~ 24432190 (+)
G785182 NA non-coding downstream 29262 24653558 ~ 24653869 (+)
G785196 LOC100380740 non-coding downstream 81154 24705450 ~ 24771803 (+)
G785198 LOC100380740 non-coding downstream 149467 24773763 ~ 24818004 (+)
G785262 NA non-coding downstream 185418 24809714 ~ 24810262 (+)
G785404 NA non-coding downstream 200321 24824617 ~ 24824840 (+)
G785138 NA other upstream 18457 24582387 ~ 24582877 (+)
LOC110531763 LOC106577738 other upstream 762220 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 797197 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 821833 23765275 ~ 23780276 (+)
LOC110531788 LOC106577570 other downstream 306055 24872772 ~ 24952098 (+)
LOC110531825 LOC106577732 other downstream 903377 25525371 ~ 25532692 (+)
G786091 NA other downstream 920935 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 1088701 25712997 ~ 25742909 (+)
G786218 NA other downstream 1333788 25874527 ~ 25958867 (+)

Expression


Co-expression Network