XLOC_026637


Basic Information

Item Value
gene id XLOC_026637
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 39112314 ~ 39113547 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052480
aataaataaattataagaacattttcatattagtcaataattattgctgaaattaatttaaaTAACAGAATATGAATGATGACtggattatatatataatattccgCCCATGTCCCCCCAAGTATTCACCTAATTCTCCGTGTACGAGCGTGCGCAGCCATTTAAAACTTTTaagcacgagacttccggtcttattcactttcgttcatttttagatgttaaaaacagcttgttttgctgtttgttttttgtttttttgcaaactgatattttctttgtatattattatattttgtctgtatagtcatgaacacacttctTTGtaaagtagtttgaccattttctgccggttattattcctggtcatttctcccatagacaactaaatcagaagttctaaacaatcac

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052480 True 408 lncRNA 0.31 2 39112314 39113547

Neighbor

gene id symbol gene type direction distance location
XLOC_026636 NA coding downstream 136616 38971435 ~ 38975698 (-)
XLOC_026635 si:dkey-106c17.2 coding downstream 193597 38912557 ~ 38918717 (-)
XLOC_026634 znf281a coding downstream 328363 38762891 ~ 38783951 (-)
XLOC_026633 si:ch211-198m17.1 coding downstream 366716 38705425 ~ 38745598 (-)
XLOC_026632 mpp3a coding downstream 419394 38647987 ~ 38692920 (-)
XLOC_026639 cdk21 coding upstream 62313 39175860 ~ 39180048 (-)
XLOC_026640 retsat coding upstream 67840 39181387 ~ 39190317 (-)
XLOC_026641 RETSAT coding upstream 78268 39191815 ~ 39198113 (-)
XLOC_026642 si:ch211-232p21.6 coding upstream 86535 39200082 ~ 39208714 (-)
XLOC_026643 nmt1a coding upstream 124549 39238096 ~ 39259919 (-)
XLOC_026631 BX936420.1 non-coding downstream 582898 38525979 ~ 38529416 (-)
XLOC_026626 NA non-coding downstream 1462925 37634100 ~ 37649389 (-)
XLOC_026625 NA non-coding downstream 1527507 37581522 ~ 37584807 (-)
XLOC_026621 CT573704.2 non-coding downstream 2036501 37075698 ~ 37075813 (-)
XLOC_026646 CU464118.1 non-coding upstream 258326 39371873 ~ 39454903 (-)
XLOC_026648 NA non-coding upstream 448237 39561784 ~ 39563301 (-)
XLOC_026651 BX322795.1 non-coding upstream 535898 39649445 ~ 39649562 (-)
XLOC_026653 BX649356.2 non-coding upstream 832318 39945865 ~ 39951527 (-)
XLOC_026654 BX649356.3 non-coding upstream 843811 39957358 ~ 39957474 (-)

Expression


Co-expression Network