trnaa-cgc


Basic Information

Item Value
gene id trnaa-cgc
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 24851808 ~ 24851879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-cgc
ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggcCCCGGGTTCAATCCCCGGCATCTCca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-cgc True 72 mRNA 0.57 1 24851808 24851879

Neighbor

gene id symbol gene type direction distance location
si:ch211-119e14.1 LOC106577735 coding upstream 156 24847658 ~ 24851652 (+)
LOC110531795 LOC106577574 coding upstream 5826 24825299 ~ 24845982 (+)
LOC118966018 NA coding upstream 51654 24795653 ~ 24800154 (+)
LOC110531804 NA coding upstream 56294 24794613 ~ 24795514 (+)
LOC110531796 LOC106577576 coding upstream 68134 24780867 ~ 24783674 (+)
dtx4a LOC103369650 coding downstream 267 24852146 ~ 24866684 (+)
LOC110531800 LOC106577573 coding downstream 17212 24869091 ~ 24871866 (+)
LOC110531788 LOC106577570 coding downstream 20893 24872772 ~ 24952098 (+)
LOC110531794 LOC106577572 coding downstream 100947 24952826 ~ 24971460 (+)
LOC110532977 LOC106577569 coding downstream 119872 24971751 ~ 25017445 (+)
G785410 NA non-coding upstream 23699 24827884 ~ 24828109 (+)
G785404 NA non-coding upstream 26968 24824617 ~ 24824840 (+)
G785198 LOC100380740 non-coding upstream 33804 24773763 ~ 24818004 (+)
G785262 NA non-coding upstream 41546 24809714 ~ 24810262 (+)
G785196 LOC100380740 non-coding upstream 80005 24705450 ~ 24771803 (+)
G785433 NA non-coding downstream 46280 24898159 ~ 25000005 (+)
G785638 NA non-coding downstream 193545 25045424 ~ 25061013 (+)
G785695 NA non-coding downstream 285964 25137843 ~ 25143127 (+)
G785793 NA non-coding downstream 307433 25159312 ~ 25164194 (+)
G785825 NA non-coding downstream 330571 25182450 ~ 25182725 (+)
G785138 NA other upstream 268931 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 764482 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1012694 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1047671 23802151 ~ 23804811 (+)
LOC110531760 LOC106577603 other upstream 1072307 23765275 ~ 23780276 (+)
LOC110531825 LOC106577732 other downstream 675794 25525371 ~ 25532692 (+)
G786091 NA other downstream 693352 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 861118 25712997 ~ 25742909 (+)
G786218 NA other downstream 1106205 25874527 ~ 25958867 (+)

Expression


Co-expression Network