trnaa-ugc-31


Basic Information

Item Value
gene id trnaa-ugc-31
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25026571 ~ 25026641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-31
ggtgtggctcagttggtagagcatggtgcttgcaacaccagggttgtgggttcaattcccacaggggatca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-31 True 71 mRNA 0.54 1 25026571 25026641

Neighbor

gene id symbol gene type direction distance location
LOC110532977 LOC106577569 coding upstream 9126 24971751 ~ 25017445 (+)
LOC110531794 LOC106577572 coding upstream 55111 24952826 ~ 24971460 (+)
LOC110531788 LOC106577570 coding upstream 74473 24872772 ~ 24952098 (+)
LOC110531800 LOC106577573 coding upstream 154705 24869091 ~ 24871866 (+)
dtx4a LOC103369650 coding upstream 159887 24852146 ~ 24866684 (+)
LOC110531806 LOC106577568 coding downstream 77212 25103853 ~ 25108225 (+)
LOC110531807 hmx1 coding downstream 168140 25194781 ~ 25197585 (+)
LOC118966019 LOC106577563 coding downstream 288721 25315362 ~ 25324106 (+)
LOC110531811 LOC106577563 coding downstream 297358 25323999 ~ 25339758 (+)
LOC110531816 NA coding downstream 340724 25367365 ~ 25369664 (+)
G785433 NA non-coding upstream 26566 24898159 ~ 25000005 (+)
G785410 NA non-coding upstream 198462 24827884 ~ 24828109 (+)
G785404 NA non-coding upstream 201731 24824617 ~ 24824840 (+)
G785198 LOC100380740 non-coding upstream 208567 24773763 ~ 24818004 (+)
G785262 NA non-coding upstream 216309 24809714 ~ 24810262 (+)
G785638 NA non-coding downstream 18783 25045424 ~ 25061013 (+)
G785695 NA non-coding downstream 111202 25137843 ~ 25143127 (+)
G785793 NA non-coding downstream 132671 25159312 ~ 25164194 (+)
G785825 NA non-coding downstream 155809 25182450 ~ 25182725 (+)
G785851 NA non-coding downstream 176447 25203088 ~ 25203310 (+)
G785138 NA other upstream 443694 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 939245 24077880 ~ 24087340 (+)
LOC110531763 LOC106577738 other upstream 1187457 23834071 ~ 23839257 (+)
LOC110531761 LOC106577604 other upstream 1222434 23802151 ~ 23804811 (+)
LOC110531825 LOC106577732 other downstream 501032 25525371 ~ 25532692 (+)
G786091 NA other downstream 518590 25545231 ~ 25546967 (+)
G785962 LOC105020693 other downstream 686356 25712997 ~ 25742909 (+)
G786218 NA other downstream 931443 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 1386471 26413112 ~ 26413532 (+)

Expression


Co-expression Network