Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966019 |
| gene name | LOC106577563 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 25315362 ~ 25324106 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036987668.1 | False | 797 | mRNA | 0.50 | 3 | 25315362 | 25324106 |
| XM_036987667.1 | True | 980 | mRNA | 0.46 | 3 | 25315459 | 25324101 |
25,306,000
25,308,000
25,310,000
25,312,000
25,314,000
25,316,000
25,318,000
25,320,000
25,322,000
25,324,000
25,326,000
NC_048573.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531807 | hmx1 | coding | upstream | 117777 | 25194781 ~ 25197585 (+) |
| LOC110531806 | LOC106577568 | coding | upstream | 207137 | 25103853 ~ 25108225 (+) |
| trnaa-ugc-31 | NA | coding | upstream | 288721 | 25026571 ~ 25026641 (+) |
| LOC110532977 | LOC106577569 | coding | upstream | 297917 | 24971751 ~ 25017445 (+) |
| LOC110531794 | LOC106577572 | coding | upstream | 343902 | 24952826 ~ 24971460 (+) |
| LOC110531816 | NA | coding | downstream | 43259 | 25367365 ~ 25369664 (+) |
| LOC110533008 | NA | coding | downstream | 72173 | 25396279 ~ 25397954 (+) |
| LOC110531817 | LOC106577558 | coding | downstream | 75403 | 25399509 ~ 25410386 (+) |
| LOC110531818 | LOC106577557 | coding | downstream | 87665 | 25411771 ~ 25418108 (+) |
| LOC110531819 | LOC106577555 | coding | downstream | 102292 | 25426398 ~ 25433817 (+) |
| G785950 | trmt44 | non-coding | upstream | 20268 | 25294064 ~ 25295094 (+) |
| G785949 | NA | non-coding | upstream | 22543 | 25292533 ~ 25292819 (+) |
| G785940 | NA | non-coding | upstream | 31329 | 25283766 ~ 25284033 (+) |
| G785934 | NA | non-coding | upstream | 39671 | 25275405 ~ 25275691 (+) |
| G785930 | NA | non-coding | upstream | 45528 | 25269424 ~ 25269834 (+) |
| LOC110531811 | LOC106577563 | non-coding | downstream | 12576 | 25323999 ~ 25339758 (+) |
| G786068 | NA | non-coding | downstream | 162306 | 25486412 ~ 25486645 (+) |
| G786089 | NA | non-coding | downstream | 213418 | 25537524 ~ 25543652 (+) |
| LOC118966182 | NA | non-coding | downstream | 223066 | 25547105 ~ 25547900 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 363266 | 24872772 ~ 24952098 (+) |
| G785138 | NA | other | upstream | 732485 | 24582387 ~ 24582877 (+) |
| hacd4 | hacd4 | other | upstream | 1228036 | 24077880 ~ 24087340 (+) |
| LOC110531763 | LOC106577738 | other | upstream | 1476248 | 23834071 ~ 23839257 (+) |
| LOC110531761 | LOC106577604 | other | upstream | 1511225 | 23802151 ~ 23804811 (+) |
| LOC110531825 | LOC106577732 | other | downstream | 203567 | 25525371 ~ 25532692 (+) |
| G786091 | NA | other | downstream | 221125 | 25545231 ~ 25546967 (+) |
| G785962 | LOC105020693 | other | downstream | 388891 | 25712997 ~ 25742909 (+) |
| G786218 | NA | other | downstream | 633978 | 25874527 ~ 25958867 (+) |
| G786496 | LOC106577539 | other | downstream | 1089006 | 26413112 ~ 26413532 (+) |
