Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110531818 |
| gene name | LOC106577557 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 25411771 ~ 25418108 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gamma-aminobutyric acid receptor-associated protein-like |
| id | name | namespace |
|---|---|---|
| GO:0006914 | autophagy | biological_process |
| GO:0007420 | brain development | biological_process |
| id | description |
|---|---|
| K08341 | GABARAP, ATG8, LC3; GABA(A) receptor-associated protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021615250.2 | True | 1482 | mRNA | 0.43 | 4 | 25411771 | 25418108 |
25,408,000
25,409,000
25,410,000
25,411,000
25,412,000
25,413,000
25,414,000
25,415,000
25,416,000
25,417,000
25,418,000
25,419,000
25,420,000
25,421,000
25,422,000
25,423,000
25,424,000
25,425,000
NC_048573.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531817 | LOC106577558 | coding | upstream | 1385 | 25399509 ~ 25410386 (+) |
| LOC110533008 | NA | coding | upstream | 13817 | 25396279 ~ 25397954 (+) |
| LOC110531816 | NA | coding | upstream | 42107 | 25367365 ~ 25369664 (+) |
| LOC110531811 | LOC106577563 | coding | upstream | 72013 | 25323999 ~ 25339758 (+) |
| LOC118966019 | LOC106577563 | coding | upstream | 87665 | 25315362 ~ 25324106 (+) |
| LOC110531819 | LOC106577555 | coding | downstream | 8290 | 25426398 ~ 25433817 (+) |
| LOC110531823 | ybx2a | coding | downstream | 28045 | 25446153 ~ 25451114 (+) |
| LOC110531824 | LOC106577554 | coding | downstream | 90436 | 25508544 ~ 25523517 (+) |
| LOC110531825 | LOC106577732 | coding | downstream | 107263 | 25525371 ~ 25532692 (+) |
| LOC118936682 | NA | coding | downstream | 114322 | 25532430 ~ 25536173 (+) |
| G786005 | NA | non-coding | upstream | 90642 | 25320871 ~ 25321129 (+) |
| G786004 | NA | non-coding | upstream | 91090 | 25320393 ~ 25320681 (+) |
| G785950 | trmt44 | non-coding | upstream | 116677 | 25294064 ~ 25295094 (+) |
| G786068 | NA | non-coding | downstream | 68304 | 25486412 ~ 25486645 (+) |
| G786089 | NA | non-coding | downstream | 119416 | 25537524 ~ 25543652 (+) |
| LOC118966182 | NA | non-coding | downstream | 129064 | 25547105 ~ 25547900 (+) |
| G786109 | LOC106577552 | non-coding | downstream | 156087 | 25574195 ~ 25577299 (+) |
| G786133 | NA | non-coding | downstream | 201969 | 25620077 ~ 25620295 (+) |
| LOC110531788 | LOC106577570 | other | upstream | 459675 | 24872772 ~ 24952098 (+) |
| G785138 | NA | other | upstream | 828894 | 24582387 ~ 24582877 (+) |
| hacd4 | hacd4 | other | upstream | 1324445 | 24077880 ~ 24087340 (+) |
| LOC110531763 | LOC106577738 | other | upstream | 1572657 | 23834071 ~ 23839257 (+) |
| LOC110531761 | LOC106577604 | other | upstream | 1607634 | 23802151 ~ 23804811 (+) |
| G786091 | NA | other | downstream | 127123 | 25545231 ~ 25546967 (+) |
| G785962 | LOC105020693 | other | downstream | 294889 | 25712997 ~ 25742909 (+) |
| G786218 | NA | other | downstream | 539976 | 25874527 ~ 25958867 (+) |
| G786496 | LOC106577539 | other | downstream | 995004 | 26413112 ~ 26413532 (+) |
