shbg (LOC100135850)


Basic Information

Item Value
gene id shbg
gene name LOC100135850
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25635682 ~ 25641068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124237.1
GAGTGGACAAATCGCTGTGAGGTTCTGGACACTGGTAAGCCTACTGAGGGTCACGGGTCTGAAGAATGGGCTCGTTAAAGACCCTGTCAGGTGGACTGCTGCTGGGTTTATGCCTCACCTTGCTGGGATGGGGAGCTGAGGGACAATGGAACGGACACCCCAAGAAGGAGATATCGGGCAGTGGCCCTATCAACCTAGGCCAACAACAACGAGGCACCTGGTGGCCCCTGATGCAGACCAGAGAGAACCTGACAGAGGTCAAAAGCATCAAGTCCATGTTCCAGTTCCGGACGTTTGACCCCGAGGGGGTGGTGTTCTATGGGGacaccagggagggagaggactgGTTTGTCCTGATCCTCAGGAACGGCCTCCCTGAGATGCAGATCGGGAAAGCAGACATCCTCGTCAGTGTGCAAGGGGGACCCAAACTCAATGATGGCAAGTGGCATCTGGTGGAGATCAGTAGCCAGGGGGATTTTGTGGTGCTGGAGGTGGACGGCCAGAAAGCGTTGGTGGTGGGACTGAAGTCCAAAGAGACCATGGAGGTTCTGACAGGCCAGATCCGCCTCGCCCTCGGGGGAATCCTGGTCAGCGTGGACAAGCTGTTCCTCCCGTTCCAGCcagagatggatggatgtatcCAGAAGGGGAACTGGCTAAACCTGAGCACCCCCTGGGAGACAGAGTTGATTGGGGAGCCCTGGCCCTGCTACCAGAACATCCAGCCAGGGAGCTATTTCCCCGGAGCAGGACTGGCTGCATTCAACACCACAGACCTCCCTGGCCACcagacagaggagggtgggatTACTATTGATATCCATGGAGACTCCACTAAAATGGAAGGAACAGTTCTGAGCTTGAACACCCCTGGGCAGGAATTGCCCACAGTAACAGTGAAAATCAACAATAACCCAAAGAAAGTCATACTGACCATCCTCAAGCGTGACACCATCACCGAACAGAGTTTCAGCAGACTGTCCCTAACCCTGTTGAAGAATCAAGTGAACATGGACATCGATGACACGCACCTAACATTTGAGATCGACAGTATACCTGACTTTCCTAGAAGCTGGAAAGAGGGGATGATCCTTGCATTTGGGGGGCTTCCAGGTGATGGAGTGTCCTACAGTAGCATCCAGTACCTGAAGGGCTGTCTGGAGAAGATCCAGGTCCAGGGACAGGATGTGGATCTAGACCGGGCGCTGTACAAGGACCTCTCTGTTTTCTCCCATAGTTGCCCCTCAGAAGTCTGAACCAAGGCTATCCTGACAGATCAGATCTGTGATGACTGTATTGATGTCATTTATCTCCATCAATCGCCCTTCCCTGGTCGCATAAACCTAATTACaaatccccccctcccccatctgcATTTTAACAGGCCCAGTCAGTATTCCTGTACACACAGTCCTAATTTTAACCATGGCTAAGAGAGATTtgaccatagaattaggaattagaataatagaatgtaaaataaccttcttatgatggtccaaaggtcagccatgttggtgagggagttggtcaaccatggtttacCAGTGCTGTGATAATATGTATAATAATGAATGTGATGAATTTATCTGCACAGTAtgtgtgttagctagcaagccagccagttttagaggaatgattccATGAAGTGCTCTTATTAACTGCCAATGTGgcaacattccattcaaacaataCAGTCAATCCACAGTCATACACTGGCTGAAGTCAGTTGATGATAGgacttagacaagttgtaaatgcaagAAGTACTGTTATTGTATGACTATATTATATGACAATATTGTAGGTTGACTATAATTTTATTACACAATTTCTGACACATCACATGCCTTACTTTTATGTTCCTACTTAAGCAAAAGCAGGAAATGCATCCCCTTTGactctactgccattcattccaattagactggttttgGATTCATTCCTGACCAAGATCGCTGCCATTTTGCcccattctggaactttgagggtttatgacatagcccctctagtaatttagTAAGATCTCTATGGGTTTGACAGTCTTTGTTTGCTTTTGACCAGGTTATGGGGTGTAAAATGAGCAGATGAGATGGGCCATTGCTTTCTGAATTTTCTGTCAATAAAGATACATTGAGCTTGTGGTAGATGA

Function

NR:

description
sex hormone-binding globulin precursor

GO:

id name namespace
GO:0005497 androgen binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124237.1 True 2155 mRNA 0.48 8 25635682 25641068

Neighbor

gene id symbol gene type direction distance location
zbtb4 LOC106577551 coding upstream 6114 25603761 ~ 25629568 (+)
LOC118966182 NA coding upstream 87782 25547105 ~ 25547900 (+)
LOC118966181 NA coding upstream 93646 25540981 ~ 25542036 (+)
LOC118936682 NA coding upstream 99509 25532430 ~ 25536173 (+)
LOC110531825 LOC106577732 coding upstream 102990 25525371 ~ 25532692 (+)
LOC110531830 LOC106577548 coding downstream 12195 25653263 ~ 25662373 (+)
LOC110531832 LOC106577546 coding downstream 23410 25664478 ~ 25678818 (+)
LOC110531831 LOC106577545 coding downstream 39211 25680279 ~ 25712960 (+)
LOC110531834 LOC106577543 coding downstream 108834 25749902 ~ 25758055 (+)
LOC110531838 drap1 coding downstream 145028 25786096 ~ 25791195 (+)
G786133 NA non-coding upstream 15387 25620077 ~ 25620295 (+)
G786109 LOC106577552 non-coding upstream 58383 25574195 ~ 25577299 (+)
G786089 NA non-coding upstream 92030 25537524 ~ 25543652 (+)
G786068 NA non-coding upstream 149037 25486412 ~ 25486645 (+)
G786134 NA non-coding downstream 744 25641812 ~ 25642049 (+)
G786166 NA non-coding downstream 103232 25744300 ~ 25744526 (+)
G785958 NA non-coding downstream 118406 25759474 ~ 25762167 (+)
G786171 NA non-coding downstream 123200 25764268 ~ 25764485 (+)
G786091 NA other upstream 88715 25545231 ~ 25546967 (+)
LOC110531788 LOC106577570 other upstream 683586 24872772 ~ 24952098 (+)
G785138 NA other upstream 1052805 24582387 ~ 24582877 (+)
hacd4 hacd4 other upstream 1548356 24077880 ~ 24087340 (+)
G785962 LOC105020693 other downstream 71929 25712997 ~ 25742909 (+)
G786218 NA other downstream 317016 25874527 ~ 25958867 (+)
G786496 LOC106577539 other downstream 772044 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1738264 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1844726 27480038 ~ 27487523 (+)

Expression


Co-expression Network