LOC110531838 (drap1)


Basic Information

Item Value
gene id LOC110531838
gene name drap1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 25786096 ~ 25791195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987699.1
CCGCCTAGCAATGTTTCTGCTCAAGCCTCCATCTTGATTTAAATGTCGCTCGCAAAACTTTATTGAAACACCCCGTATGCAAAATAGTTTAGCTTAGCTATAGTAGCTTGGCTAACGTTATCTAGTAGGAAACGAGCAAAGTAAAAAGTGCAGGCTAGAAGAATCCGACGGAACGTGAGACCCTGCGGAACATCTCGAGAAGGCTACgtgctaggctagctagctagctagctacctacccaTTGGGTGCGGGTTGGAGGGACATATAATAACAAAATATCGAAGATTGTTTTAAGTTAAACAGTTCATAAAATAATGCCCAGCAAAAAGAAGAAATACAATGCGAGATTCCCCCCGGCCAGGATTAAGAAGATTATGCAGACTGATGAAGAGATAGGCAAAGTGGCTGCCGCCGTTCCTGTCATCATATCACGAGCTCTGGAGCTGTTCCTGGAGTCTCTCCTGACGAAAGCCTGTCAAGTCACCCAGTCCCGGAACGCAAAAACAATGACGACGTCACACTTTGTGTGTCTTGGTAGAAAACAGTGCATTGAGCTGGAGCAGCAGTTTGACTTCCTGAAGGACCTGGTAGCGGCAGTGCCTGACATGCAGGGCGAGGGAGAGGACAACCACGCAGAGGGAGGGGAAAAGGTTGCACGCAGAGGTCGAAAGCCGGGGTCAGGCCGCAAGAATGGAGGAGTTGGCTGCAAGGGCAAGGACAAGAAGCTATCAGGCACAGAGTCAGAGCAAGAGGATGACTCCGAGGACAGCGAGACAGACGAGGATGAGGAAGACGGGTCTCAGTCAAGCACAAACCTGCAGCCACAATCCCGATTCCACAGCCCAGACACCATGCCACCCCAGTACCTCCACATGGGCACCGCACAAGGGGGCCTGGTCATGCCCCTGGGCTCCTTTGCCCCCCACCCCTCGCTGATGGGCACCGcacccccacctcccccctccaTGCCGCACAAAGATGAAGACGATGATGATGAAGACTATGACTCTTAGCTCCCCCCCGCTCTTTTTACCTTTAATTTTCTCTTAAGTTCTTCTCTTCTGTGGCTGCATTGAGAAAGAGGTGAGTCTGGGCAGATGCTCACATGCGGCCCATTGTTAAGGAAAAGCCTCCAACAACTGGCAGTAAGGTGTGTAGACATGACAGCTGGCACCACTGAAGACGAGTAATCGGTTGTATAttgtgtttaattatttgttattttattgtggaGGGGAAAAAATGAACCAGGTTGTTTTATAAAGACAGGTGGTTGTTCTATTTGGACTAAAAATGTCAGTtgatgttctgaaaggcccccaGCTCAAGTACCGGTTTGATTAAGTCCCCCATTGTAGTTTGCACTTTGGTTATTCTCTCATCTCTGTTTTCTGCATACGTCATTGGTGTTCAACAGACATATCACTCCAGCTCCTTGTCCACTTCTTCAACGTCTGCTCTGGTTCAGTTGAGATGATCCAACTGTAATGCCTGTGCAGCCTACGTAGCCTCATAgaatactgtacacacagacaccTTCTCGAGATGAAGTCAGAGCAGTGGTCGGTTGTATTTTTGAAAGGGGTCAGCACTTTCCTATAGCAAAGGGAGATGAGATGATTGTCTGTGAGGATTCTGAATTTGGCAGAGCGGTTAGATCTTGGTCTTGCTTTCGGAGTTGGCCGTTATTGCACGTGGCTATTCCAATTGTTAGGGTGTGGGTAAGGAGATGTGTTTTACTGTAGGTTATGAATTCTTCTCAATGTGACTTGAGTTGAGGATTTTCCCCTTTTTTAATGCAACTTTTTATGACGATAATTGATCCTCCTGAAGACCTTGGCCGTTAGCTTACGTCAACCATAATCACATGTCATTATGCTAATGATTACAACTCCAATTGGTTGTTTTTGTTGATTTGAAATATGAGTGACAAGTCACTGCTTTTGAGGTAAAATATGTTGTGTTGTACCCCCTTCCCCACCCCAACTATCTCCTTCTTGAAGACAGATATTTCTGTGCTGGCTATTCTTATCTGAAATGTACTGTGATGCTCCTCCTGGACCATAACTTTGTTTTTAAAGTTGTTAAACCGCTCACCTTTTCGCCTATAATTTGTTTTCAAAAATATATCGTCCCCCCACTTGGAATAAAATTCTcctttgtattgtatttttttcttctctcttttaGATTGTTTTAATGTACACATTGAAACGCAGAGAAGGATAGGGCTCCCGTTTCAGTGTCTCTTGATATGAAATGTTTTAAGGTAGGCCGTTGAACTTGACGCTGTATGTAaaattttaacattttattttgtatGGGTGAAATAAAGTTCAGATTTCAATAAAA
>XM_021615285.2
CTAGCAATGTTTCTGCTCAAGCCTCCATCTTGATTTAAATGTCGCTCGCAAAACTTTATTGAAACACCCCGTATGCAAAATAGTTTAGCTTAGCTATAGTAGCTTGGCTAACGTTATCTAGTAGGAAACGAGCAAAGTAAAAGTTGGGTGATGGGCTTTTAACTGTTTGTCACGTTGAGCCTGCAATGTTGGATTTTATCTCAACGCGACAGTACTTTGATAATGCAACaatctgtgtttgtttgttatttCTCACACGAGTGCTGTCCATTTGACCAGAGTGCAGGCTAGAAGAATCCGACGGAACGTGAGACCCTGCGGAACATCTCGAGAAGGCTACgtgctaggctagctagctagctagctacctacccaTTGGGTGCGGGTTGGAGGGACATATAATAACAAAATATCGAAGATTGTTTTAAGTTAAACAGTTCATAAAATAATGCCCAGCAAAAAGAAGAAATACAATGCGAGATTCCCCCCGGCCAGGATTAAGAAGATTATGCAGACTGATGAAGAGATAGGCAAAGTGGCTGCCGCCGTTCCTGTCATCATATCACGAGCTCTGGAGCTGTTCCTGGAGTCTCTCCTGACGAAAGCCTGTCAAGTCACCCAGTCCCGGAACGCAAAAACAATGACGACGTCACACTTTGTGTGTCTTGGTAGAAAACAGTGCATTGAGCTGGAGCAGCAGTTTGACTTCCTGAAGGACCTGGTAGCGGCAGTGCCTGACATGCAGGGCGAGGGAGAGGACAACCACGCAGAGGGAGGGGAAAAGGTTGCACGCAGAGGTCGAAAGCCGGGGTCAGGCCGCAAGAATGGAGGAGTTGGCTGCAAGGGCAAGGACAAGAAGCTATCAGGCACAGAGTCAGAGCAAGAGGATGACTCCGAGGACAGCGAGACAGACGAGGATGAGGAAGACGGGTCTCAGTCAAGCACAAACCTGCAGCCACAATCCCGATTCCACAGCCCAGACACCATGCCACCCCAGTACCTCCACATGGGCACCGCACAAGGGGGCCTGGTCATGCCCCTGGGCTCCTTTGCCCCCCACCCCTCGCTGATGGGCACCGcacccccacctcccccctccaTGCCGCACAAAGATGAAGACGATGATGATGAAGACTATGACTCTTAGCTCCCCCCCGCTCTTTTTACCTTTAATTTTCTCTTAAGTTCTTCTCTTCTGTGGCTGCATTGAGAAAGAGGTGAGTCTGGGCAGATGCTCACATGCGGCCCATTGTTAAGGAAAAGCCTCCAACAACTGGCAGTAAGGTGTGTAGACATGACAGCTGGCACCACTGAAGACGAGTAATCGGTTGTATAttgtgtttaattatttgttattttattgtggaGGGGAAAAAATGAACCAGGTTGTTTTATAAAGACAGGTGGTTGTTCTATTTGGACTAAAAATGTCAGTtgatgttctgaaaggcccccaGCTCAAGTACCGGTTTGATTAAGTCCCCCATTGTAGTTTGCACTTTGGTTATTCTCTCATCTCTGTTTTCTGCATACGTCATTGGTGTTCAACAGACATATCACTCCAGCTCCTTGTCCACTTCTTCAACGTCTGCTCTGGTTCAGTTGAGATGATCCAACTGTAATGCCTGTGCAGCCTACGTAGCCTCATAgaatactgtacacacagacaccTTCTCGAGATGAAGTCAGAGCAGTGGTCGGTTGTATTTTTGAAAGGGGTCAGCACTTTCCTATAGCAAAGGGAGATGAGATGATTGTCTGTGAGGATTCTGAATTTGGCAGAGCGGTTAGATCTTGGTCTTGCTTTCGGAGTTGGCCGTTATTGCACGTGGCTATTCCAATTGTTAGGGTGTGGGTAAGGAGATGTGTTTTACTGTAGGTTATGAATTCTTCTCAATGTGACTTGAGTTGAGGATTTTCCCCTTTTTTAATGCAACTTTTTATGACGATAATTGATCCTCCTGAAGACCTTGGCCGTTAGCTTACGTCAACCATAATCACATGTCATTATGCTAATGATTACAACTCCAATTGGTTGTTTTTGTTGATTTGAAATATGAGTGACAAGTCACTGCTTTTGAGGTAAAATATGTTGTGTTGTACCCCCTTCCCCACCCCAACTATCTCCTTCTTGAAGACAGATATTTCTGTGCTGGCTATTCTTATCTGAAATGTACTGTGATGCTCCTCCTGGACCATAACTTTGTTTTTAAAGTTGTTAAACCGCTCACCTTTTCGCCTATAATTTGTTTTCAAAAATATATCGTCCCCCCACTTGGAATAAAATTCTcctttgtattgtatttttttcttctctcttttaGATTGTTTTAATGTACACATTGAAACGCAGAGAAGGATAGGGCTCCCGTTTCAGTGTCTCTTGATATGAAATGTTTTAAGGTAGGCCGTTGAACTTGACGCTGTATGTAaaattttaacattttattttgtatGGGTGAAATAAAGTTCAGATTTCAATAAAA
>XM_021615286.2
ATGTTTCTGCTCAAGCCTCCATCTTGATTTAAATGTCGCTCGCAAAACTTTATTGAAACACCCCGTATGCAAAATAGTTTAGCTTAGCTATAGTAGCTTGGCTAACGTTATCTAGTAGGAAACGAGCAAAGTAAAAGTTGGGTGATGGGCTTTTAACTGTTTGTCACGTTGAGCCTGCAATGTTGGATTTTATCTCAACGCGACAGTACTTTGATAATGCAACaatctgtgtttgtttgttatttCTCACACGAGTGCTGTCCATTTGACCAGAGTGCAGGCTAGAAGAATCCGACGGAACGTGAGACCCTGCGGAACATCTCGAGAAGGCTACgtgctaggctagctagctagctagctacctacccaTTGGGTGCGGGTTGGAGGGACATATAATAACAAAATATCGAAGATTGTTTTAAGTTAAACAGTTCATAAAATAATGCCCAGCAAAAAGAAGAAATACAATGCGAGATTCCCCCCGGCCAGGATTAAGAAGATTATGCAGACTGATGAAGAGATAGGCAAAGTGGCTGCCGCCGTTCCTGTCATCATATCACGAGCTCTGGAGCTGTTCCTGGAGTCTCTCCTGACGAAAGCCTGTCAAGTCACCCAGTCCCGGAACGCAAAAACAATGACGACGTCACACTTAAAACAGTGCATTGAGCTGGAGCAGCAGTTTGACTTCCTGAAGGACCTGGTAGCGGCAGTGCCTGACATGCAGGGCGAGGGAGAGGACAACCACGCAGAGGGAGGGGAAAAGGTTGCACGCAGAGGTCGAAAGCCGGGGTCAGGCCGCAAGAATGGAGGAGTTGGCTGCAAGGGCAAGGACAAGAAGCTATCAGGCACAGAGTCAGAGCAAGAGGATGACTCCGAGGACAGCGAGACAGACGAGGATGAGGAAGACGGGTCTCAGTCAAGCACAAACCTGCAGCCACAATCCCGATTCCACAGCCCAGACACCATGCCACCCCAGTACCTCCACATGGGCACCGCACAAGGGGGCCTGGTCATGCCCCTGGGCTCCTTTGCCCCCCACCCCTCGCTGATGGGCACCGcacccccacctcccccctccaTGCCGCACAAAGATGAAGACGATGATGATGAAGACTATGACTCTTAGCTCCCCCCCGCTCTTTTTACCTTTAATTTTCTCTTAAGTTCTTCTCTTCTGTGGCTGCATTGAGAAAGAGGTGAGTCTGGGCAGATGCTCACATGCGGCCCATTGTTAAGGAAAAGCCTCCAACAACTGGCAGTAAGGTGTGTAGACATGACAGCTGGCACCACTGAAGACGAGTAATCGGTTGTATAttgtgtttaattatttgttattttattgtggaGGGGAAAAAATGAACCAGGTTGTTTTATAAAGACAGGTGGTTGTTCTATTTGGACTAAAAATGTCAGTtgatgttctgaaaggcccccaGCTCAAGTACCGGTTTGATTAAGTCCCCCATTGTAGTTTGCACTTTGGTTATTCTCTCATCTCTGTTTTCTGCATACGTCATTGGTGTTCAACAGACATATCACTCCAGCTCCTTGTCCACTTCTTCAACGTCTGCTCTGGTTCAGTTGAGATGATCCAACTGTAATGCCTGTGCAGCCTACGTAGCCTCATAgaatactgtacacacagacaccTTCTCGAGATGAAGTCAGAGCAGTGGTCGGTTGTATTTTTGAAAGGGGTCAGCACTTTCCTATAGCAAAGGGAGATGAGATGATTGTCTGTGAGGATTCTGAATTTGGCAGAGCGGTTAGATCTTGGTCTTGCTTTCGGAGTTGGCCGTTATTGCACGTGGCTATTCCAATTGTTAGGGTGTGGGTAAGGAGATGTGTTTTACTGTAGGTTATGAATTCTTCTCAATGTGACTTGAGTTGAGGATTTTCCCCTTTTTTAATGCAACTTTTTATGACGATAATTGATCCTCCTGAAGACCTTGGCCGTTAGCTTACGTCAACCATAATCACATGTCATTATGCTAATGATTACAACTCCAATTGGTTGTTTTTGTTGATTTGAAATATGAGTGACAAGTCACTGCTTTTGAGGTAAAATATGTTGTGTTGTACCCCCTTCCCCACCCCAACTATCTCCTTCTTGAAGACAGATATTTCTGTGCTGGCTATTCTTATCTGAAATGTACTGTGATGCTCCTCCTGGACCATAACTTTGTTTTTAAAGTTGTTAAACCGCTCACCTTTTCGCCTATAATTTGTTTTCAAAAATATATCGTCCCCCCACTTGGAATAAAATTCTcctttgtattgtatttttttcttctctcttttaGATTGTTTTAATGTACACATTGAAACGCAGAGAAGGATAGGGCTCCCGTTTCAGTGTCTCTTGATATGAAATGTTTTAAGGTAGGCCGTTGAACTTGACGCTGTATGTAaaattttaacattttattttgtatGGGTGAAATAAAGTTCAGATTTCAATAAAA
>XM_036987700.1
CTAGCTAGTTAGTAGACAATAAGATAAAGCTAGTTAGCTGGATAACTTTGTAGTTAACAATGCGTATCTACAACTCTAGCTATCTAACTAATGGTAACGTTAGCTACCTAAGTTAGCCATCCAGCCACTTGGGAGGGTGGCTATTAAAAAGGCATTGCTAGCTTAGCTTGTTCATTGTTGTTATTAAGTTTGCCAGCTGTACTAACTGATAGACGAGATTTAGTTATTGACCTAAACAAGTATTAGTTAGCCTGTTAGCTAGGCCTGCTAGGGGGTTGTATCATTCAGAATAAGTGAGACATGATCGGGAAAATTGGAGGATGTGGCTAGCGTTGTAAATGCTTGCCAGATACTAGCATAAGTTGTCAACAAACCAGTCCGCCTAGGAATGtcatgatacactacatgaccaaagGCCAGGATTAAGAAGATTATGCAGACTGATGAAGAGATAGGCAAAGTGGCTGCCGCCGTTCCTGTCATCATATCACGAGCTCTGGAGCTGTTCCTGGAGTCTCTCCTGACGAAAGCCTGTCAAGTCACCCAGTCCCGGAACGCAAAAACAATGACGACGTCACACTTTGTGTGTCTTGGTAGAAAACAGTGCATTGAGCTGGAGCAGCAGTTTGACTTCCTGAAGGACCTGGTAGCGGCAGTGCCTGACATGCAGGGCGAGGGAGAGGACAACCACGCAGAGGGAGGGGAAAAGGTTGCACGCAGAGGTCGAAAGCCGGGGTCAGGCCGCAAGAATGGAGGAGTTGGCTGCAAGGGCAAGGACAAGAAGCTATCAGGCACAGAGTCAGAGCAAGAGGATGACTCCGAGGACAGCGAGACAGACGAGGATGAGGAAGACGGGTCTCAGTCAAGCACAAACCTGCAGCCACAATCCCGATTCCACAGCCCAGACACCATGCCACCCCAGTACCTCCACATGGGCACCGCACAAGGGGGCCTGGTCATGCCCCTGGGCTCCTTTGCCCCCCACCCCTCGCTGATGGGCACCGcacccccacctcccccctccaTGCCGCACAAAGATGAAGACGATGATGATGAAGACTATGACTCTTAGCTCCCCCCCGCTCTTTTTACCTTTAATTTTCTCTTAAGTTCTTCTCTTCTGTGGCTGCATTGAGAAAGAGGTGAGTCTGGGCAGATGCTCACATGCGGCCCATTGTTAAGGAAAAGCCTCCAACAACTGGCAGTAAGGTGTGTAGACATGACAGCTGGCACCACTGAAGACGAGTAATCGGTTGTATAttgtgtttaattatttgttattttattgtggaGGGGAAAAAATGAACCAGGTTGTTTTATAAAGACAGGTGGTTGTTCTATTTGGACTAAAAATGTCAGTtgatgttctgaaaggcccccaGCTCAAGTACCGGTTTGATTAAGTCCCCCATTGTAGTTTGCACTTTGGTTATTCTCTCATCTCTGTTTTCTGCATACGTCATTGGTGTTCAACAGACATATCACTCCAGCTCCTTGTCCACTTCTTCAACGTCTGCTCTGGTTCAGTTGAGATGATCCAACTGTAATGCCTGTGCAGCCTACGTAGCCTCATAgaatactgtacacacagacaccTTCTCGAGATGAAGTCAGAGCAGTGGTCGGTTGTATTTTTGAAAGGGGTCAGCACTTTCCTATAGCAAAGGGAGATGAGATGATTGTCTGTGAGGATTCTGAATTTGGCAGAGCGGTTAGATCTTGGTCTTGCTTTCGGAGTTGGCCGTTATTGCACGTGGCTATTCCAATTGTTAGGGTGTGGGTAAGGAGATGTGTTTTACTGTAGGTTATGAATTCTTCTCAATGTGACTTGAGTTGAGGATTTTCCCCTTTTTTAATGCAACTTTTTATGACGATAATTGATCCTCCTGAAGACCTTGGCCGTTAGCTTACGTCAACCATAATCACATGTCATTATGCTAATGATTACAACTCCAATTGGTTGTTTTTGTTGATTTGAAATATGAGTGACAAGTCACTGCTTTTGAGGTAAAATATGTTGTGTTGTACCCCCTTCCCCACCCCAACTATCTCCTTCTTGAAGACAGATATTTCTGTGCTGGCTATTCTTATCTGAAATGTACTGTGATGCTCCTCCTGGACCATAACTTTGTTTTTAAAGTTGTTAAACCGCTCACCTTTTCGCCTATAATTTGTTTTCAAAAATATATCGTCCCCCCACTTGGAATAAAATTCTcctttgtattgtatttttttcttctctcttttaGATTGTTTTAATGTACACATTGAAACGCAGAGAAGGATAGGGCTCCCGTTTCAGTGTCTCTTGATATGAAATGTTTTAAGGTAGGCCGTTGAACTTGACGCTGTATGTAaaattttaacattttattttgtatGGGTGAAATAAAGTTCAGATTTCAATAAAA

Function

symbol description
drap1 Predicted to enable several functions, including RNA polymerase II general transcription initiation factor activity; core promoter sequence-specific DNA binding activity; and transcription coactivator activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; positive regulation of transcription by RNA polymerase II; and transcription by RNA polymerase II. Predicted to be part of negative cofactor 2 complex. Predicted to be active in nucleus. Orthologous to human DRAP1 (DR1 associated protein 1).

NR:

description
dr1-associated corepressor-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K21752 DRAP1, NC2-alpha; Dr1-associated corepressor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987699.1 False 2353 mRNA 0.45 8 25786096 25791195
XM_021615285.2 False 2486 mRNA 0.45 7 25786100 25791195
XM_021615286.2 False 2465 mRNA 0.45 7 25786106 25791195
XM_036987700.1 True 2411 mRNA 0.45 7 25786724 25791195

Neighbor

gene id symbol gene type direction distance location
LOC110531834 LOC106577543 coding upstream 28041 25749902 ~ 25758055 (+)
LOC110531831 LOC106577545 coding upstream 73136 25680279 ~ 25712960 (+)
LOC110531832 LOC106577546 coding upstream 107278 25664478 ~ 25678818 (+)
LOC110531830 LOC106577548 coding upstream 123947 25653263 ~ 25662373 (+)
shbg LOC100135850 coding upstream 145028 25635682 ~ 25641068 (+)
LOC110531839 LOC106577540 coding downstream 1571 25792766 ~ 25832287 (+)
alpk1 alpk1 coding downstream 1405326 27196521 ~ 27213187 (+)
epdl1 LOC106577537 coding downstream 1422924 27214119 ~ 27220387 (+)
LOC110531847 NA coding downstream 1465408 27256603 ~ 27267492 (+)
LOC110531852 rtn3 coding downstream 1549503 27340698 ~ 27375922 (+)
G786189 NA non-coding upstream 2782 25782222 ~ 25783314 (+)
G786188 NA non-coding upstream 4147 25781740 ~ 25781949 (+)
G786183 NA non-coding upstream 10878 25774811 ~ 25775218 (+)
G786174 NA non-coding upstream 19253 25766643 ~ 25766843 (+)
G786172 NA non-coding upstream 21112 25764704 ~ 25764984 (+)
G786205 NA non-coding downstream 45968 25837163 ~ 25837537 (+)
G786218 NA non-coding downstream 83332 25874527 ~ 25958867 (+)
G786227 NA non-coding downstream 105723 25896918 ~ 25917477 (+)
G786222 NA non-coding downstream 115027 25906222 ~ 25927271 (+)
G785962 LOC105020693 other upstream 43187 25712997 ~ 25742909 (+)
G786091 NA other upstream 239129 25545231 ~ 25546967 (+)
LOC110531825 LOC106577732 other upstream 253819 25525371 ~ 25532692 (+)
LOC110531788 LOC106577570 other upstream 834000 24872772 ~ 24952098 (+)
G785138 NA other upstream 1203219 24582387 ~ 24582877 (+)
G786496 LOC106577539 other downstream 621917 26413112 ~ 26413532 (+)
G787022 LOC106577527 other downstream 1588137 27379332 ~ 27379664 (+)
taf6l taf6l other downstream 1694599 27480038 ~ 27487523 (+)
rbpjb LOC106577485 other downstream 3548786 29248127 ~ 29342203 (+)

Expression


Co-expression Network