trnaa-ugc-34


Basic Information

Item Value
gene id trnaa-ugc-34
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 27658481 ~ 27658556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-34
ggtcccgtgtggctcagttggtagagcatggcgcttgcaacgccaaggctgtgggtttgattcccacgggggacca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-34 True 76 mRNA 0.62 1 27658481 27658556

Neighbor

gene id symbol gene type direction distance location
LOC110531865 LOC106577518 coding upstream 11116 27633636 ~ 27647365 (+)
LOC110531863 LOC100695098 coding upstream 58884 27588954 ~ 27599597 (+)
LOC110533009 NA coding upstream 80166 27575441 ~ 27578315 (+)
LOC110531861 LOC106608584 coding upstream 96956 27494465 ~ 27561525 (+)
kcnk7 LOC106577521 coding upstream 168043 27487648 ~ 27490438 (+)
LOC110531867 LOC106577513 coding downstream 110080 27768636 ~ 27772723 (+)
ank2b LOC103361685 coding downstream 337323 27995879 ~ 28163412 (+)
LOC110531872 LOC106577502 coding downstream 673250 28331806 ~ 28340457 (+)
LOC110531876 LOC106577496 coding downstream 789706 28448262 ~ 28548376 (+)
LOC118966204 NA coding downstream 838661 28497217 ~ 28497272 (+)
G787118 NA non-coding upstream 34711 27620977 ~ 27623770 (+)
G787107 NA non-coding upstream 73713 27584463 ~ 27584768 (+)
G787069 NA non-coding upstream 152106 27501379 ~ 27506375 (+)
G787013 NA non-coding upstream 256772 27400367 ~ 27401709 (+)
G788583 NA non-coding downstream 45459 27704015 ~ 27704232 (+)
G788588 NA non-coding downstream 49755 27708311 ~ 27708510 (+)
G788596 NA non-coding downstream 55949 27714505 ~ 27714714 (+)
G788605 NA non-coding downstream 60989 27719545 ~ 27719913 (+)
G788638 NA non-coding downstream 82025 27740581 ~ 27740834 (+)
taf6l taf6l other upstream 170958 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 278817 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 1244949 26413112 ~ 26413532 (+)
G786218 NA other upstream 1699614 25874527 ~ 25958867 (+)
G785962 LOC105020693 other upstream 1915572 25712997 ~ 25742909 (+)
rbpjb LOC106577485 other downstream 1681425 29248127 ~ 29342203 (+)
LOC110531891 NA other downstream 2624119 30282637 ~ 30288163 (+)
G793757 LOC107579696 other downstream 3937440 31595996 ~ 31596918 (+)
LOC110531915 LOC106595846 other downstream 4094779 31753182 ~ 31757502 (+)
zgc:112271 bola2 other downstream 4464126 32122682 ~ 32124851 (+)

Expression


Co-expression Network