LOC110531871 (LOC106577503)


Basic Information

Item Value
gene id LOC110531871
gene name LOC106577503
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 28294175 ~ 28310607 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615348.2
CCCCCATCCATTTAAATGGTGGTGGAGTGCGAGGAGCGCAGACACACACGGAAGAGCAGCCCCTACAGCTGGCAGCGGGTGTTTCTAAAACAGACTCGTTGCTGAGAGAGAAGGACCTGTCAAGTCTCTCACGTCCTAGAATAAACACAAGTGAGGTTCGCGATTGATGCAACACAGTTTTAAGTGAAGAGTGAAGTTGATTCAACTATTTTTGTAAGAGGAGCCACGTTTCAAACGAGGAATAGAGCATTCCGACGGGAAGATGTTTTGCGTGGTAGAACTTTGGATTAACGTTTTAATGGTGGGGACTTCAAACACGCGTGTTGCAGCATTTGAAAGGACTGGACTGCTATTATCGTCGGCTACTGAACACAAACGTTGTCATCGGGCTAGAGTATGAGAGTAGGCCATTGAGGACAATGCTAACACAATTTCCAAGGGCTGCTACACCGGGACATGTGCAACGCTCCTCCACCGCATTCGCTCGTTGTCCACCATGACAACCACTGCCAATAACTTTGTTGCAATGTAGCAAACCAACGATCgcttaattatatatatatatatattttttactcagACTAACACAATGATTCGAGTGGTTTGGTTTTTGATGCAGTGTAAACGTCGGGGATGAAGATGTTTATCGTCAGTGTCCTGGCGAGTTTATTCGCGTTTACTTCACTGACATGTGGCTATCAGATGTCGTGGGGAAATTGGAATGGCAATTCGCAGAACCGAGTGAGTAATCGTGACAAGACCACTCAACCTCACATCATTTTCATCCTGGTTGATGACCAAGGCTTCCGGGACGTGGGCTACCATGGGTCCGAGATCAAAACCCCAACTCTGGACAGGCTGGCAGCGCAGGGAGTGAAACTGGAGAATTACTATGTTCAGCCTCTCTGTAGCCCTTCCAGGAGTCAATTGATGACTGGCAGGTATCAGATCCACACGGGCCTCCAGCACTCGGTCATCCGGCCCACCCAGGCCAACTGTCTGCCCCTGGAGAACGTCACACTGCCACAAAAACTCAGGCAGGCGGGCTACTCCACCCACATGGTGGGCAAGTGGCACCTGGGCTTCTACAAACGCGGCTGCATGCCCACCCAGCGGGGCTTCGACACCTTCTTTGGGTCCCTGCTGGGTAGCGGTGATTACTATAGCCATTATAAATGTGACGGTCCTGGCATGTGTGGCTATGATCTctatgaaggggaggaggcggCCTGGGAACAAGATAGGGGCCAATACTCAACCCTGATGTTCACCCAAAAAGCTGTGGACATCCTGGCTCACCACAACCCTCAAAAACCCTTATTCCTCTACTTGGCCTTTCAGGCGGTCCACTCCCCGCTACAGGTGCCCGCTCTCTACCTGGAGCGCTACAAGTCCATCCCTAACTTACATCGTCGCAAGTACGCCGCCATGGTGTCCTGCCTGGACGAGGCCATCCACAACCTCACGCTGGCGCTAAAGCGCTACGGTTTCTATGACGATACAGTGATAGTGTATTCGTCAGACAACGGGGGCCAGCCCATGGCCGGGGGCAACAACTGGCCACTGAGGGGGAGCAAGGCAACTTACTGGGAGGGGGGCATCCGGGCCGTAGGCTTCGTCCATAGTCCCCTGCTTGTGAACAAGGGGACCCAATGTCGGGCGTTGATTCACATCACGGACTGGTTCCCCACCCTGGTGTCCTTGGGGGAGGGGACTCTGGACGAAGACCTCAACCTGGACGGGTACGACGTGTGGGAGGCCATCAGCGAGGGCCGTCCGTCCCCCCGGCAGGACATCCTACACAACATTGACCCTATCTACACTAAGGCCAAGAATGGATCCTGGAAGGCCGGCTACGGCCTCTGGAACACGGCCATCCGTGCCGCCCTCCGGGTCGGTCACTGGAAGCTCCTTACTGGGGTGCCAGGCTACAGCGACTGGGTCCCTCCGCAGACGTTCTCCAGTCAACTTCTGACCAACCGCTGGCATAATGAACGCATCCGCTGGGACCGGGGAAAGTCCATCTGGCTGTTCAACATCACAGCAGACCCCTATGAACGAGTGGACCTGTCACTACACTACCCACACATAGTGAAGATGATGCTATTGAGGCTAGCACAGTACAATAGGACTGCCATCCCGGTGCGCTACCCGGCTAAAGACTCCCGCTCCAACCCTAACTTTAACGGAGGGGTTTGGGGACCCTGGTacaaggaggaagaggatgaagacgATAGGGAGACTAACCTCTTCACTAACTACCTGGCCAAGAAGAGACGGAAGAAGAAAGCGAAGAAGAGGAAGCTCTGAAAAGAAAGGGGGAGGATTAgacttttttaaatttttttattgtTGTGACTTTTTGTGTGACACTTTTTAGATGGTCAGATCTCAGGGATTGACACACAATCTGTCTTAAAGGATTGTCCTGCTCAATGATTTGAAGACTTGAATGGACTGGTGCTTGGATAGTATGGGAAATCAATGGACAAATGGACATAGATTTGCCTCCGAGTAGGCTAAAAGTAGGCTTTATGGAAAATACCCACTTTAAATGACTACTGTCAGACCCAACACCTATGACCTCACGACTATGGGTTAAGGCCTTTAAAAGAGTGTTTGTTTTTCTGGTTTTTATTGCATGCTTGAATTCCTGTGACATTCAGATTGTTAATAGATTCATTACATTTCatcagagagaaaataaatatagAATGAATCTTTACGGACAGCGTCATATTTTTGGGGTGAAATAATAAAAGAACCAAATCAACAAAACAGTTTATTCTATTAGCTGTTGATTGCAGTGTTTTTTTTCAAGAATATGAAAACAAAATGTAGGATTTATATCTGCTAGTCAGCTGAGATTTAGTTTGTTTTATTAGCACAGTCGGTCTGAACCTTAAGATAATGTATGTTCTCCCCCCTTAGGTCTGTCTGCTGTGGCTCCAGTTCAACTTGAATGTAAAACAAAACTAGCAAAAAAATGAAAGACCCCGATgcaatttttatattttttttccatTTGTCTCATTCCGCCACGGAGTCttttctcatctttctctctctgtacttccACGTCTCTCTCTTGCGCTATCTCTTGCTCACTTTTTGTTGCTTGAtttctctcgcgctctctttaTCTCTCGCTCTCAATGACAAATTTATCAGTCCCAATTTTGCAgcagtagtgtttttttttatttgtattttttgtgaCAGGAAAGTTTTCTGTCTGCTGCACATTGTCACTGCAGCCGATGGCACCTTTTTCGTACCTTTTTTATTTTAGTGGAAAATACTATAAAGTTGAACTTGGTCCAGCGTGCCAGATTCAACTCCTTTGTTGCTTGTCTTGAAGCGCCAGATTCATCAGTCGGTGTTGAACAGTAAAACAGAAATGCCATAAATGGAAACAACCCACATGTTTTTGGGCAAAGAAATATAACTTGCAACCATTAAGTCAAACAGTATTTAATTTGATTTTCTGTTGCTTGACGCTGTCAATAAACATACTTTTTATATATA

Function

NR:

description
arylsulfatase J-like

GO: NA

KEGG:

id description
K12375 ARSI_J; arylsulfatase I/J

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615348.2 True 3528 mRNA 0.47 2 28294175 28310607

Neighbor

gene id symbol gene type direction distance location
camk2d1 LOC106577507 coding downstream 10715 28163668 ~ 28283460 (-)
LOC110531868 LOC106577509 coding downstream 397337 27894036 ~ 27896838 (-)
chi chi coding downstream 421804 27867348 ~ 27872371 (-)
LOC100136672 sstr1b coding downstream 459761 27821574 ~ 27834414 (-)
LOC110531864 LOC106577516 coding downstream 670345 27601045 ~ 27623830 (-)
LOC110531873 LOC106577501 coding upstream 31532 28342139 ~ 28432006 (-)
LOC110531875 zcchc4 coding upstream 125934 28436541 ~ 28443621 (-)
LOC110531879 LOC106577493 coding upstream 356632 28667239 ~ 28993223 (-)
LOC110531880 NA coding upstream 653837 28964444 ~ 28966956 (-)
LOC110531881 LOC106577491 coding upstream 731968 29042575 ~ 29045196 (-)
G789268 NA non-coding downstream 27925 28265788 ~ 28266250 (-)
G789131 NA non-coding downstream 229580 27995891 ~ 28064595 (-)
G789009 NA non-coding downstream 462213 27827524 ~ 27831962 (-)
G788738 NA non-coding downstream 487013 27806958 ~ 27807162 (-)
G789397 NA non-coding upstream 4220 28314827 ~ 28315047 (-)
G789403 NA non-coding upstream 17252 28327859 ~ 28328172 (-)
G789433 NA non-coding upstream 69772 28380379 ~ 28381404 (-)
G789435 NA non-coding upstream 71249 28381856 ~ 28382430 (-)
G789436 NA non-coding upstream 72142 28382749 ~ 28383538 (-)
G789228 LOC106577504 other downstream 147196 28145220 ~ 28146979 (-)
G788495 NA other downstream 730650 27563162 ~ 27563525 (-)
G788408 LOC106577523 other downstream 825853 27463292 ~ 27468322 (-)
LOC110531854 LOC106577527 other downstream 912886 27376312 ~ 27381485 (-)
G789863 LOC100194703 other upstream 218213 28528820 ~ 28652471 (-)
G789945 NA other upstream 352844 28663451 ~ 28666058 (-)
G790535 NA other upstream 738291 29048898 ~ 29049244 (-)
G790551 NA other upstream 758245 29068852 ~ 29069187 (-)

Expression


Co-expression Network