XLOC_026646 (CU464118.1)


Basic Information

Item Value
gene id XLOC_026646
gene name CU464118.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 39371873 ~ 39454903 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051904
CACAGTAAACCAGACAGACAGAGAGGAAAAGCGACCCAGATAACAAGCGTTATCACTCCACAGCGTTTGACTGGATAACAGGCTGTCGTAGAGGGAATGAATCTCAGAGCCTCATCCACAGGGAGCCTCCCGGCAATCTGAGGATTTTTTTTGTGAGGATTCCTTGATTGAGAGGAGGATTCTGTGGGAATATTGGTGTCGGAAGCTGGAATACTGTGCCATGAGTGGGAATAGGAGGCGGAAGAGGGATTGCTGAAGCATGGAGCAGGCAAAAGGGCGGAGAGATGGGCTCTCTTCATCCAGTGAGAACCCTCGGCCGGTGGTCCGGAGCGGGACAGATGGGCTGGGCGTGTCCTGGCAGGGTCCACGCACGCTGGTGCTCCAAAAGAACTCTCAGGGCTTCGGCTTTACTCTGCGTCACTTCATCGTTTACCCGCCAGAGTCCGCTCTGCACACCACTCTCAAGGTGAGGAGAATAAAAGCTGTCACAAAATTCAAATATAAGAACACAGGACAGAAAAACATTCAGTAAGATGCAAGCTAAACAAACTATCCCTGTCACAAGTAGTGAAGTATAGTATAATAATGTCGTTCCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097747

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051904 True 596 lncRNA 0.50 2 39371873 39454903

Neighbor

gene id symbol gene type direction distance location
XLOC_026645 arhgap23a coding downstream 8808 39313094 ~ 39363065 (-)
XLOC_026644 plcd3a coding downstream 66582 39260082 ~ 39305291 (-)
XLOC_026643 nmt1a coding downstream 111954 39238096 ~ 39259919 (-)
XLOC_026642 si:ch211-232p21.6 coding downstream 163159 39200082 ~ 39208714 (-)
XLOC_026641 RETSAT coding downstream 173760 39191815 ~ 39198113 (-)
XLOC_026647 zgc:100868 coding upstream 17439 39472342 ~ 39488639 (-)
XLOC_026648 NA coding upstream 106881 39561784 ~ 39563301 (-)
XLOC_026649 si:dkey-27o4.1 coding upstream 164668 39619571 ~ 39627412 (-)
XLOC_026650 grapa coding upstream 176027 39630930 ~ 39648021 (-)
XLOC_026651 BX322795.1 coding upstream 194542 39649445 ~ 39649562 (-)
XLOC_026637 NA non-coding downstream 258326 39112314 ~ 39113547 (-)
XLOC_026636 NA non-coding downstream 396175 38971435 ~ 38975698 (-)
XLOC_026631 BX936420.1 non-coding downstream 842457 38525979 ~ 38529416 (-)
XLOC_026626 NA non-coding downstream 1722484 37634100 ~ 37649389 (-)
XLOC_026625 NA non-coding downstream 1787066 37581522 ~ 37584807 (-)
XLOC_026653 BX649356.2 non-coding upstream 490962 39945865 ~ 39951527 (-)
XLOC_026654 BX649356.3 non-coding upstream 502455 39957358 ~ 39957474 (-)
XLOC_026657 BX649547.1 non-coding upstream 633782 40088685 ~ 40088801 (-)

Expression


Co-expression Network