Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966022 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 28893048 ~ 28894058 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053221.1 | True | 713 | mRNA | 0.45 | 3 | 28893048 | 28894058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531878 | LOC106577495 | coding | upstream | 229414 | 28553769 ~ 28663634 (+) |
| LOC110531876 | LOC106577496 | coding | upstream | 344672 | 28448262 ~ 28548376 (+) |
| LOC118966204 | NA | coding | upstream | 395776 | 28497217 ~ 28497272 (+) |
| LOC110531872 | LOC106577502 | coding | upstream | 552591 | 28331806 ~ 28340457 (+) |
| ank2b | LOC103361685 | coding | upstream | 732794 | 27995879 ~ 28163412 (+) |
| LOC110531882 | LOC106577492 | coding | downstream | 142397 | 29036455 ~ 29039588 (+) |
| rbpjb | LOC106577485 | coding | downstream | 354069 | 29248127 ~ 29342203 (+) |
| tbc1d19 | tbc1d19 | coding | downstream | 460058 | 29354116 ~ 29381669 (+) |
| stim2b | LOC106577483 | coding | downstream | 489034 | 29383092 ~ 29473789 (+) |
| LOC110531891 | NA | coding | downstream | 1388579 | 30282637 ~ 30288163 (+) |
| G789629 | NA | non-coding | upstream | 192151 | 28696693 ~ 28700897 (+) |
| G789485 | NA | non-coding | upstream | 222763 | 28667262 ~ 28670285 (+) |
| G789493 | NA | non-coding | upstream | 353901 | 28531813 ~ 28539147 (+) |
| G789481 | NA | non-coding | upstream | 445714 | 28447127 ~ 28447334 (+) |
| G789472 | zcchc4 | non-coding | upstream | 455498 | 28436588 ~ 28437550 (+) |
| G789754 | NA | non-coding | downstream | 29897 | 28923955 ~ 28996300 (+) |
| G790159 | NA | non-coding | downstream | 104521 | 28998579 ~ 28998779 (+) |
| G790172 | NA | non-coding | downstream | 121108 | 29015166 ~ 29020160 (+) |
| G790176 | NA | non-coding | downstream | 131340 | 29025398 ~ 29025622 (+) |
| G790177 | NA | non-coding | downstream | 132653 | 29026711 ~ 29026960 (+) |
| taf6l | taf6l | other | upstream | 1405525 | 27480038 ~ 27487523 (+) |
| G787022 | LOC106577527 | other | upstream | 1513384 | 27379332 ~ 27379664 (+) |
| G786496 | LOC106577539 | other | upstream | 2479516 | 26413112 ~ 26413532 (+) |
| G786218 | NA | other | upstream | 2934181 | 25874527 ~ 25958867 (+) |
| G785962 | LOC105020693 | other | upstream | 3150139 | 25712997 ~ 25742909 (+) |
| G793757 | LOC107579696 | other | downstream | 2701938 | 31595996 ~ 31596918 (+) |
| LOC110531915 | LOC106595846 | other | downstream | 2859277 | 31753182 ~ 31757502 (+) |
| zgc:112271 | bola2 | other | downstream | 3228624 | 32122682 ~ 32124851 (+) |
