tbc1d19 (tbc1d19)


Basic Information

Item Value
gene id tbc1d19
gene name tbc1d19
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 29354116 ~ 29381669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987795.1
CGTATTTTTTGTTTCCTCTACATCCATAGTCCGTAGTTGCTAAGTAACCACTGCAGAGGCCAAAGGCTGCATCACCGGATACCAAATGGATTCTAAAAGTCTAATTGCCTTATCGTAGTGTAGATAAACCAAAACGAGCATTGAAAATGATGGATGAGGGAACGGAGTTATCACTGACAATTGCGCAAATTGTCCAGCGACTGAAAGCAACCCATTTACACTCTCAAATAGAGAGACAGGCCAAaGAGTGTTTGCATAGACCCGAGATACAATTAGAATCTCTAAAAGAGGACGTTCGTAATTTTCTCAAAGCATCAGGTTGGGAGAGAAAGCTACAGAATGCAGTATACAGAGAGTTGCACGttcagcCGCTCCCCAGCCACCCTGCAGCTCCCCCAGAGCACGCCAAGGAGCCTCTGGCGTACATGCGCAAGGCCCAGGTAAACTGGGAGAAGCGTATCCTCAAAAGCCTGAACAGCATGTGCACAGAGCTGGGTGTACCCTTGGCTCGTAAGAGGCCAGCTGTGGAACAGAAGGAGTTGACCAACAAGTGGAACGAGATGGGGACAGACGAACCAGATCTAAGTCGTTTCAGGCCTGTCTATGCTCCCAAAGACTTTCTGGAGGTGCTGATCAGCCTACGGAACCCAAACCATGACAGCAGTGAGGAGGCCAGCGCAAAGAGTCACTGGGGCCTCATCCAGGTGCCCCTCCACGACAGAGACATACCTCAGATGAGAGAGGCCTATTCAGAGTTGAGCCTGACCACGGGGCAGCTGGGTATTGACGACCATACACACGTACCCCCAGATTTGTTTGAAAGCGAGCATACTCGCATCGGGAAGAAAGTGGTAAATGAGCAAGACAGTGCAGCAGCCCAGCAGTACAGTAGACAGGGCTGTCCCACTGGCCTACGAGCTGACCTCTGGGCCCTCATCCTCAACTCCACCAATGAGCCTGAGGATGTGATGCATTATGAGCAGCTGAAGGCTGGAGTCATACACCATGACCTGCTGGTGGATAACCTCATCTACAAGGATGTGAAACTGACTGCGAGTAATGATGACTACTACTTTGTGTTTGAAGATTTCCTGTATCAGGTCCTGCTATGTTTCTCTCGAGACACTGCGGTCTTGGAGCACTTCAGCTACAACAGTGCCACTCCTCCCAAATCCTACATTCAAGGCAAGGTGGGAGTTGAGGAGTTTGCTGTGGTGTATCCTCCAAATGGTGTCATCCCATTCCATGGTTTTTCAATGTATGTGGCCCCTCTGTGCTTCCTGTACAACGAGCCCTCCAAGCTGTACAGTGTGTTTAGGGAGATGTACGTACGCTACTTCTTCAGGCTgcactctgtctcttcctccacctctGGTATAGTGTCTCTGTGCCTACAGTTTGAGAGGCTGCTACAGACCCATCTCCCCCAGCTATTCTACCATCTACGGGAGATAGGCGCTCAgccCTTGCGTATTGCCTTTAAGTGGATGGTGAGAGCGTTTTCTGGGTACCTTTCTACTGACCAGCTCCTCCTTCTGTGGGACCGAATCCTGGGTTACGACTCACTGGAGATTGTAGCAGtcCTAGCAGCGGCCGTCTTTGCCTTCCGGGCTGAGAACCTGATGGAGGTGACATCACTGACCTCAGCTGAAGCCGTCCTCGCCGACCTTTCAACTCTGAAGGTCATGCCCCTCATTCAGATCTTCCTGTTCGCCACTGTCATCTGAGGACctgcgtgttgtgtgtgtgtgacacgtgtgtgcgcgcgcaccgGAGGAGACTTGAGCAATTGCCTGTGCTGTCAAGCTGTTCCCATGCCAACGCCAGTGATCGTCTGTCAGAGTCAGAGATGCCAACCACACCTTATATGGAATatgaaaaggcaaaaaaaaagaccCCTGAAACCTTGTATATCCATCCCACCATATTCCTTTCACTGTGTCAAAGCTGCATGTCCCTCTGCATGCACGCTACAGAAATAGTTATCACCATGTATCATATTATTAgatatattatacagtatgtaaGTATAGCCCTCAGATAAGCTAAGCAAATCTTACCTCCTTAAGCTATGCCCTCTAAGTAAGATGATATATATGCCAATGCTTGGGACCAGCTTGATGAGTCTATTGGAAGCTGGATTGCATGGAACAGTATTGTATTGGGTTGACAGTGTGAGAGAGGGAACCCACTGGctaaaaactggttgaatcaatgttgtttccacgtcattttaaCAAAAACAATtcaatgtgatgacattgaatcaaagTGGTAAACTGATTGGATtagcaaaaagtcatcaacctaAGGGAGTCGTATTTTTTTCACCCATTTtgtaacctaaatccaatgacatttttgttgatttcacgttagttgacaactcaaccaaatgtaaatcaaaactaggcATTGAGattacgtctgtgcccagtgggaagtagTTGTAGCTGTCTACAGTGTGACCATTGATGTGTTAAGGAAACTCTGATAAGTGTTCAGTGGGGTCTTAACATTTTATATTTTCATGAAGCGCTCCTTGCAATAATAATCCTGTATTAGACGCTAATCAGAAGCTGCTCTGTGTCGGGTTCCTCAAGAAaatgatctcagttaattcattaTCTAAGTCATAATTAATAAGGCTTAAACTAATATTCTAATGTTCATTTTTTAATATGCAAGATATTATCATAAGATATGACTTGTGTATAAGATATGCCATTACAACACTGTTTTTGTCTCAgtattgtttttattgtttttgtttttaattgtGAAAATGATCATTGAAGAACCTTTGTTTGAATTGTTCTTTTATGTAATTAGTGTACATTTTTTATGGATTTAATTAATTATTGCGTTCACATGCTATATTTTGTATTTGTCTCGCCCTGTTATTTGATACCTGACCCAATTTTGTTCCATTTTGTGCCCATTGTCAAATGTATGTGCCCAGattacatattttttatttacagtTTAATTTCAGGATTTTCTTACATTTCACCCTACCCAATGCGGTCAATGTCTCTGAGATCAGGGGACATTAATCAATCATAGCATCATAGCATAGTTTTGTTTTTCAATGCTCATTACATTAAAATAAAGTAATGAAACCTATA

Function

symbol description
tbc1d19 Orthologous to human TBC1D19 (TBC1 domain family member 19).

NR:

description
TBC1 domain family member 19

GO:      GO:0005097,GO:0032851

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987795.1 True 3128 mRNA 0.44 21 29354116 29381669

Neighbor

gene id symbol gene type direction distance location
rbpjb LOC106577485 coding upstream 13763 29248127 ~ 29342203 (+)
LOC110531882 LOC106577492 coding upstream 314528 29036455 ~ 29039588 (+)
LOC118966022 NA coding upstream 460058 28893048 ~ 28894058 (+)
LOC110531878 LOC106577495 coding upstream 690482 28553769 ~ 28663634 (+)
LOC110531876 LOC106577496 coding upstream 805740 28448262 ~ 28548376 (+)
stim2b LOC106577483 coding downstream 1423 29383092 ~ 29473789 (+)
LOC110531891 NA coding downstream 900968 30282637 ~ 30288163 (+)
LOC110531892 LOC106577482 coding downstream 992702 30374371 ~ 30598347 (+)
LOC110531915 LOC106595846 coding downstream 2371513 31753182 ~ 31757502 (+)
LOC110531917 LOC106608522 coding downstream 2518391 31900060 ~ 31992396 (+)
G790214 NA non-coding upstream 268240 29085649 ~ 29085876 (+)
G790211 LOC106577489 non-coding upstream 274046 29079844 ~ 29080070 (+)
G790206 LOC106577489 non-coding upstream 281089 29072776 ~ 29073027 (+)
G790205 NA non-coding upstream 281718 29070129 ~ 29072398 (+)
G790493 NA non-coding downstream 161350 29543019 ~ 29543870 (+)
G790888 NA non-coding downstream 188178 29569847 ~ 29570077 (+)
G790913 NA non-coding downstream 207575 29589244 ~ 29589523 (+)
G790918 LOC100136012 non-coding downstream 210576 29592245 ~ 29592728 (+)
G790932 NA non-coding downstream 219548 29601217 ~ 29601417 (+)
taf6l taf6l other upstream 1866593 27480038 ~ 27487523 (+)
G787022 LOC106577527 other upstream 1974452 27379332 ~ 27379664 (+)
G786496 LOC106577539 other upstream 2940584 26413112 ~ 26413532 (+)
G786218 NA other upstream 3395249 25874527 ~ 25958867 (+)
G793757 LOC107579696 other downstream 2214327 31595996 ~ 31596918 (+)
zgc:112271 bola2 other downstream 2741013 32122682 ~ 32124851 (+)
G794892 NA other downstream 3120178 32501847 ~ 32502355 (+)

Expression


Co-expression Network