LOC110531916


Basic Information

Item Value
gene id LOC110531916
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 31772967 ~ 31780212 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615393.2
GTtagtgtgacgtataatctactggacggaacgcttctttcatcagcagcaacagttagtcagacacctcggtagcttgctagacaaaaTAGCCGAATCAATAACGCTCTTTAGACGCTTTAGTGTATATTACCCACTGCATTTTAACCCACTTTTTTCGTCTAGTTAGTTATCCGATGTAATTTCATATTTAcggtgttgttgttattagtcagctagcgggctggtttcgttagcattagcctagctagcgAACATCtccgaccatgagttcactaagctactctcctgataaagaagaggctgtctgctggacggagaaagaagctctggtgaaagaggaggaggaagaggaggctgtttcaatacaaaaacaagtagatgGTGAGGCTGTTTCCGTGAAAGAAGAAGAGCAAAACGTtagagtgaaagaagaggaagacgtgttcagagtgaaagaggaggaggatgttacagtaaaagaagagaaagaggatgatgcagtttttggagtgaaagaggaggaggagatgactgtcacatccaaagaagaggaggaaactggacatctgggcccggtttcccaaacgcaTCTTAAAGCATCCAATGGTTCTAACGGTGAACTTAGCCGTAAGATGCTTTTGAGAAACCGTTccctgattaacactagagagagaagtgATTattgtggatcctctggggagcctcaacaacctcataatgctgacgaggcagagaaaagTATCTTCAGATCAGAACACatcaagaaacaccagcagagacccaCAGTGAAGAAATCtcaccactgctctgactgtggcaAGAGTTACTTAAGATCAAATTCACTGAAAGTACACCTGAGAATACACACTAGAGAGAAActtcactgctgctctgactgcggGAAGAGATTCACCTCTTCAGTAGACCTTAAAATACATCAGagaattcacactggagagaaaccttatggctgtgatcaatgtgggaaaagTTTTACTCAGCCAAGCAACCTGAAATCACAccaaagaatacacacaggagagaaaccatttagctgtaatcaatgtggtaAGAGTTTTATTCAGTCAAGCAGCCTGATagtgcaccagagaacacacacaggagagaaatgtTATAGCTGTAATcattgtgggaagagtttcactcAGTCAAGCAGCCTGATagtgcaccagagaacacacacaggagagaagccatatGACTGTCCTCAATGTGGGAAAAGTTTTGTTACATCTGGCAGTCTGAagacacaccagagaacacacacgggagagaaaccttatagctgtaatcaatgtgggaagagttttactcagccaAACAGCCTGATAGTACAtttgagaacacacacaggaaagaaatctcatagctgtgatcaatgtgacaaGAGATTCTCTGATAAAAGATTtctgatcaaacatcagaaaatacatgcaTGAAGaagttgtttcatgatatcaatgaaataatgtcacaatgtggaatgttttttaaattgtagaaggagtattttaatgaatgTCACAATATAGAACCCTAAGTGTTTGCCCCCTGCTTATTTGATTTTAGCATGATATGAATATTAGCCTCAGGGgaaaaatccaggctctgaattgaGAGTACTATTTATGAGATTTAACAAAACGTGTTGTGTAACCCCATGTTTGCCACCCTCTTGAATCAAAATGTTAAACTTcaaaatgtagctgactgtcttcttCAGgctgtcctctaaccagtgaggtaaaatatatctcccatttccatgtgttttttaaattgtgttagtttcaacagcacatACAACTGATTTCTCTCCTAATCGATATCGGTGATTTATTGCTACTTGTCAAAACAACAGCGTTTCTGGTGCTTGTGCAGTTTTTATGGTGCTTCTATGATTATTGTGGcagatgtgtttatttttttatttaacctttatttaaccaggtaggctagttgagaacaagttctcatttgcaactgcgacctggccaagataaaggaaagcagtgtgacacagacaacaacacagagttacacatggagtaaacaataatcaagtcaatggcacagtagaaaaaataaagtctatatacagtgtgtgccaaaggcatgaggaggtaggagcgaataattacaatttagcagattaacactggagtgataaatgagcagatgatgatgtgcaaaagAAAATGTAAATAGCACATTTTATGTTGAGGTTTTCAATATATTACAAACTGTTTCTGCATtttggttattgatttggacactttaaaactgtgttttgacattgggcTATCCCATCTcgcaaaatgtaattgaaaagacGTTGAAAAGAAGACAAGGCCCGACATTCAATATACGTTCGGTTATAGTTGAAAATATGTATTTCCAGGTCGTTTTTTCAATGACTTGAAAACATATTCATTTCAACTTACTTGCAGCCTATACACATGGACGCAGTATAATAACTTGGTCTATAATCAATGTATTAACAATTTTAGAAGAGTTCTAGATGCAAGTGAGTTTAAAAAACAAGAttgtagaaaaatatatatttagaaaTACGTGCTTTTAATTGTTGGAAGCCAGTAGACACCATGTTTATATTGTAGAAAGTGAATCATGTGAAATGGAAGTTattttctgttggtggtgagcaaacttgtccaacaaaaatataggatatatttgttGTCTTGACAGGAGAggtgttacaggctttggtttttccatttatgttttgaggttggaatGTAGCACATAGAGCTCGTTAGCAAGTATTGCTAGTTAGCACGTATAGCCCgttgattggtgtcacctcgttagtcagtatgtgttacacctgtgctggcttgtccatctcgttatgGTTGAATATTGCATCCAATTGTTAATATTTTAATCAatggattttcctcaggatgCTCATTAGTCTTTCAGTTGTTATTCTTCTGTTTTGtatcctcttatgtttgttgtgtagtaaatagttctgtttattttctttgttttttatacattttttcctCTGAAGTCGTTTTGttgcatccatgtctgaaatgtgctgtataaataaagcttgttTTGATA

Function

NR:

description
zinc finger protein 664-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615393.2 True 3123 mRNA 0.38 2 31772967 31780212

Neighbor

gene id symbol gene type direction distance location
LOC110531151 NA coding downstream 278473 31369483 ~ 31494494 (-)
LOC118965934 LOC106595224 coding downstream 732752 31038078 ~ 31040215 (-)
LOC118965933 NA coding downstream 938579 30832726 ~ 30834388 (-)
LOC110532982 NA coding downstream 1412175 30359807 ~ 30360792 (-)
LOC110531887 LOC106577486 coding downstream 2419368 29344381 ~ 29353599 (-)
LOC110531919 LOC106577449 coding upstream 312982 32093194 ~ 32102718 (-)
slx1b LOC106577450 coding upstream 334092 32114304 ~ 32122169 (-)
LOC110531923 LOC106577454 coding upstream 398067 32178279 ~ 32201170 (-)
LOC110531924 LOC106577455 coding upstream 436931 32217143 ~ 32220999 (-)
LOC110531926 NA coding upstream 441915 32222074 ~ 32239463 (-)
G793862 NA non-coding downstream 91353 31681382 ~ 31681614 (-)
G793857 NA non-coding downstream 94749 31678005 ~ 31678218 (-)
G793762 NA non-coding downstream 172569 31600056 ~ 31600398 (-)
G793760 NA non-coding downstream 175035 31597645 ~ 31597932 (-)
G793743 NA non-coding downstream 186873 31585826 ~ 31586094 (-)
G794042 NA non-coding upstream 10896 31791108 ~ 31791502 (-)
G794043 NA non-coding upstream 11515 31791727 ~ 31792177 (-)
G794047 NA non-coding upstream 15405 31795617 ~ 31795839 (-)
G794048 NA non-coding upstream 17873 31798085 ~ 31798297 (-)
G794063 NA non-coding upstream 34664 31814876 ~ 31815094 (-)
G793842 NA other downstream 110769 31661239 ~ 31662198 (-)
G793489 NA other downstream 353994 31418455 ~ 31418973 (-)
G793472 NA other downstream 369098 31403482 ~ 31403869 (-)
G792267 NA other downstream 1415003 30315310 ~ 30357964 (-)
G790598 NA other downstream 2623950 29131374 ~ 29149017 (-)
G794311 LOC106577443 other upstream 245859 32026071 ~ 32028445 (-)
G796733 rl32 other upstream 2270847 34051059 ~ 34057549 (-)
G797605 NA other upstream 3089743 34869955 ~ 34875879 (-)
G798195 NA other upstream 3574007 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3605641 35381661 ~ 35400349 (-)

Expression


Co-expression Network