XLOC_026648



Basic Information


Item Value
gene id XLOC_026648
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 39561784 ~ 39563301 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00053080
GAAATTTTCATGTCAGatttttcatttcttcaattgCTCTGATTTGTTGGAGATGCtgtaatgtttcccaaatgatgcaaaCGTTACAGAACGATGAGAGTTTTAGCGTAAAACATGCTCAAGTATCACATGGAGTTTGTAAGGCATCTTTTATAGTAAAGTGGGTGGGCATCTTCCTTCATCCCTCCACTTTTCTATTTAAACTTGATCTCGAAGCAGATGCAGTTGATGGAGTCGCACTCTGGCGGTTGACAAGTACAGGCGCAATCCATCATGgcacaatg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00053080 True 284 lncRNA 0.40 2 39561784 39563301

Neighbor


gene id symbol gene type direction distance location
XLOC_026647 zgc:100868 coding downstream 73145 39472342 ~ 39488639 (-)
XLOC_026646 CU464118.1 coding downstream 106881 39371873 ~ 39454903 (-)
XLOC_026645 arhgap23a coding downstream 198719 39313094 ~ 39363065 (-)
XLOC_026644 plcd3a coding downstream 256493 39260082 ~ 39305291 (-)
XLOC_026643 nmt1a coding downstream 301865 39238096 ~ 39259919 (-)
XLOC_026649 si:dkey-27o4.1 coding upstream 56270 39619571 ~ 39627412 (-)
XLOC_026650 grapa coding upstream 67629 39630930 ~ 39648021 (-)
XLOC_026651 BX322795.1 coding upstream 86144 39649445 ~ 39649562 (-)
XLOC_026652 b9d1 coding upstream 128224 39691525 ~ 39696066 (-)
XLOC_026653 BX649356.2 coding upstream 382564 39945865 ~ 39951527 (-)
XLOC_026637 NA non-coding downstream 448237 39112314 ~ 39113547 (-)
XLOC_026636 NA non-coding downstream 586086 38971435 ~ 38975698 (-)
XLOC_026631 BX936420.1 non-coding downstream 1032368 38525979 ~ 38529416 (-)
XLOC_026626 NA non-coding downstream 1912395 37634100 ~ 37649389 (-)
XLOC_026654 BX649356.3 non-coding upstream 394057 39957358 ~ 39957474 (-)
XLOC_026657 BX649547.1 non-coding upstream 525384 40088685 ~ 40088801 (-)
XLOC_026659 NA non-coding upstream 616835 40180136 ~ 40181654 (-)

Expression



Co-expression Network