LOC118965935


Basic Information

Item Value
gene id LOC118965935
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32077618 ~ 32078723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986938.1
ATGCCACTCAAACTATTTCACACTTACTCAAGACTGCTACGATTTGTTGACCGTGAGTCAAGACCCACAAGATGTGTGACAGACAAACTAGCAGCCATAAGAGGGGTCTGGGACAAGTGGGTGGAGCGGCTGCCAGTCCTTTACAACCCAGGGCCTGACGTGACAGTGGATGAGCAACTGGTTCCATTCAGAGGCCGTTGTCCATTCCGGCAGAACATGCCCAGCAAGCCAGCAAAATATGGGATCAAGTCATGGGTGGCCTGCGACGCCAATTCCAGCtacgcttggaagatgcaagtctacaccgggaagccgaccagtggaggcccagagaagaaccaggggatgcgGGTTGTGCTTGATGGGACTGAGGGGTCTGAGCTCCCACCTGCACTGCTTGTGTCAAAGGAAAGAGAGTTCTTCTCATCAAGGTTTGCTTTCAcgcccaccaccactctagtttcctACCTCCCAAAGAAAAACAAGCATGTGTTACTTCTGAGCACACTGCACACAGAGGCTGAAATTAGCGATCGCCAGGACAGGAGGCCAGCCATCATCCTAGACTACAACTGCAACAAAGGAGGTGTGGACAACCTAGTGATTGGAATGTACAGCTGCAGaaggatgactgcccgctggcccctggtcatcatCCACAACATCATTGATGTTTCCTCCTACAATACCTTTGTCATATGGAGAGATCAACCCTAG

Function

NR:

description
piggyBac transposable element-derived protein 4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986938.1 True 717 mRNA 0.52 3 32077618 32078723

Neighbor

gene id symbol gene type direction distance location
LOC110531918 LOC106577443 coding upstream 50404 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 85222 31900060 ~ 31992396 (+)
LOC110531915 LOC106595846 coding upstream 320116 31753182 ~ 31757502 (+)
LOC110531892 LOC106577482 coding upstream 1479271 30374371 ~ 30598347 (+)
LOC110531891 NA coding upstream 1791379 30282637 ~ 30288163 (+)
LOC110531922 LOC106577451 coding downstream 33069 32111792 ~ 32114299 (+)
zgc:112271 bola2 coding downstream 44036 32122682 ~ 32124851 (+)
rpl34 rpl34 coding downstream 415767 32494490 ~ 32498602 (+)
ostc ostc coding downstream 441355 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 956222 33032239 ~ 33061120 (+)
G794318 NA non-coding upstream 36975 32040370 ~ 32040643 (+)
G794165 NA non-coding upstream 154658 31922734 ~ 31922960 (+)
G794157 NA non-coding upstream 164818 31912592 ~ 31912800 (+)
G794142 NA non-coding upstream 179559 31897844 ~ 31898059 (+)
G794141 NA non-coding upstream 180007 31897388 ~ 31897611 (+)
G794377 NA non-coding downstream 25805 32104528 ~ 32127935 (+)
G794415 NA non-coding downstream 84833 32163556 ~ 32163962 (+)
G794417 NA non-coding downstream 88657 32167380 ~ 32167653 (+)
G794418 NA non-coding downstream 88981 32167704 ~ 32167973 (+)
G794419 NA non-coding downstream 89259 32167982 ~ 32168294 (+)
G793757 LOC107579696 other upstream 480700 31595996 ~ 31596918 (+)
rbpjb LOC106577485 other upstream 2735415 29248127 ~ 29342203 (+)
taf6l taf6l other upstream 4590095 27480038 ~ 27487523 (+)
G794892 NA other downstream 423124 32501847 ~ 32502355 (+)
G794893 NA other downstream 423673 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 504883 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 2042699 34121422 ~ 34121740 (+)

Expression


Co-expression Network