LOC110531919 (LOC106577449)


Basic Information

Item Value
gene id LOC110531919
gene name LOC106577449
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32093194 ~ 32102718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021615398.2
CACCGTGCTCATGCGCACTGTGTGCAGTTCTGTTTGAAGTGAACTGACCAGTGAATATAGTATGCAACAATACTGGCGCAAGAAAACCATTAGAAACCATACTAAATGCATTATCTCAAATCTATTTACAAGTTTTCTTGATTGTCTCAATGCATCGGTGGAACAATGTTAGGTCATCACTATCCAAACGTGGAAAAGTCACAACTGGTCAGCTATGTGGAGGATTATTTGGAATGTGTTGAGTCCATGCCTTTGGATATACAAAGAAACGTCTCTCTGCTGCGAGAAATTGACTCAAAGTATCAAGAGGTCCTGAAGGAGGTTGACGATGTCTATGAGCGTTACCAGGGCGAGCAGGATGCGGCTCAGCGTAAGAGGCTTCAGATTCAGCTGCAGCGGGCCCTCATCAGTAGCCAGGAGCTCGGCGACGAGAAGATCCATGTGGTTACCCAGATGACCGAGCTGGTAGAGAACCGCTCCCGCCAGATGGACTCCCTCTGCCTCCAGGAGCCCAGCGAGACCAGTGAGCGGGTCGTCACCGAGCGGCGCTCCAGTTCTGTCCAGGAGGCGGCGGTGTCCACCCCTGCTGAGCGTTCCTCGGCCCGCCGGCCGAGACGCCAGCGCAACAGTGAGAGCCGTGACTCCAACCACGCCTCGGGGAATGGAGCGGTGATGGACGACCCGGCGGATGAGCTGCCCCTGCAGCCGCGGGAGAAAAGGTCCAAGTCGGCCAAGAAGAAGAAGCGCAAGGCCAAGCAGGAGCGCGACGCCTCGCCCGTGGAGTTCACCATCGACCCCAACGAGCCCACCTACTGCCTGTGCGAGCAGGTGTCATACGGCGAGATGATCGGCTGCGATAACGACGCGTGCCCCATCGAGTGGTTCCACTTCTCCTGCGTGGGGCTCACCTACAAGCCCAAGGGGAAGTGGTTCTGTCCCAAGTGCAGAGGGGACAACGAAAAGACTATGGACAAAAACCTGGACAAGAACAAAAAGGACCGGAGGTCCAGGTAGTAGGTACAAGTCCTCCGTCCGTTGTCCCTTTCCTCTCGGAACATTGAACTGAGGGTGGAGTTTATTGAAGTGATTCATTCAAGGGATGATGAAATGTCAAGTTCTGAGAGCAATCGGAACACTATTTCCATCAGCGCTTACTTTGAGTAAAAGACTTGACTTGGTGCTGTTACAATACTGGCGACTCACACTGAAGCCTAAATGTTGTTTTGCGAAGTCCGATGTTGACTGTAAGGATCCTCAGCCTAAGCTGCCAtcttctgtctgtaatgtgtgtTACTTAACTTCCGTTCTAACAAGTGTATTGAGTAACTCGAGAAGCAAATTTTGGCTTACTAGCCCATTTGGAAATGTTGATTTGATATAATGTATCTGAATGAATGATGTCCTTTTTGTAAAAATGAATACATTATGTTTGGCCCATTTTCTTAATGTGTTTTTAAAATAAGTCTGTTCCAAATCGTGTGTCTCGATTCATGAATCACTGTACCAGACGGGGCTAAATAGATTGTGCAATGTTTTATTTTGTATGGCTGACAGAGGGGTAGTTTGCGCTGTTTCTGTGAGGTGTTCATCTGAGTTGGTATTTCAGGTCATTTTATGATTTCCCAACTGTCATTTCAATTGACCATCCACAGGTGCAGCACTCCAATTTGCTAAAAAGTGATGGTCTGTCTGGAATGGGATTTCATATTTGTGGAGACAGTCTACAGTCTATTACTTTTATCtgtttcactacacccgcaataacatctgctaaataagtGTGTTCGACCAATAAAATGTAACTTGAAATATACATT

Function

NR:

description
inhibitor of growth protein 2-like isoform X1

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K19198 ING2; inhibitor of growth protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021615398.2 True 1817 mRNA 0.48 2 32093194 32102718

Neighbor

gene id symbol gene type direction distance location
LOC110531916 NA coding downstream 312982 31772967 ~ 31780212 (-)
LOC110531151 NA coding downstream 598700 31369483 ~ 31494494 (-)
LOC118965934 LOC106595224 coding downstream 1052979 31038078 ~ 31040215 (-)
LOC118965933 NA coding downstream 1258806 30832726 ~ 30834388 (-)
LOC110532982 NA coding downstream 1732402 30359807 ~ 30360792 (-)
slx1b LOC106577450 coding upstream 11586 32114304 ~ 32122169 (-)
LOC110531923 LOC106577454 coding upstream 75561 32178279 ~ 32201170 (-)
LOC110531924 LOC106577455 coding upstream 114425 32217143 ~ 32220999 (-)
LOC110531926 NA coding upstream 119409 32222074 ~ 32239463 (-)
LOC118966025 NA coding upstream 138289 32241007 ~ 32243922 (-)
G794311 LOC106577443 non-coding downstream 64749 32026071 ~ 32028445 (-)
G794255 NA non-coding downstream 163184 31929797 ~ 31930010 (-)
G794250 NA non-coding downstream 170463 31922373 ~ 31922731 (-)
G794248 NA non-coding downstream 174134 31918733 ~ 31919060 (-)
G794143 NA non-coding downstream 193996 31898984 ~ 31899198 (-)
G794508 NA non-coding upstream 19955 32122673 ~ 32124772 (-)
G794537 NA non-coding upstream 69121 32171839 ~ 32171926 (-)
G794557 NA non-coding upstream 112537 32215255 ~ 32215470 (-)
G794560 NA non-coding upstream 122231 32224949 ~ 32225363 (-)
G793842 NA other downstream 430996 31661239 ~ 31662198 (-)
G793489 NA other downstream 674221 31418455 ~ 31418973 (-)
G793472 NA other downstream 689325 31403482 ~ 31403869 (-)
G792267 NA other downstream 1735230 30315310 ~ 30357964 (-)
G796733 rl32 other upstream 1948341 34051059 ~ 34057549 (-)
G797605 NA other upstream 2767237 34869955 ~ 34875879 (-)
G798195 NA other upstream 3251501 35354219 ~ 35354675 (-)
LOC110531966 LOC106571884 other upstream 3283135 35381661 ~ 35400349 (-)
LOC118966032 LOC106571870 other upstream 3389308 35492026 ~ 35521884 (-)

Expression


Co-expression Network