zgc:112271 (bola2)


Basic Information

Item Value
gene id zgc:112271
gene name bola2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 32122682 ~ 32124851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001160518.1
AAAGCGACACCAAAAGTATGTCTGTTACAACAGATCACATCCGTGACAAACTAATCAAGGAGATCGGAGCGGTGCATGTGGAAGTTGAAGACACATCCCCTAACAGATGTGCTGCCAGCTTCAAAGTTCTAATAGTGTCTCCCCAGTTTGAGGGGAAACCACTGCTGGCGAGACACAGGATGGTGAACACCTGCTTGGCTGAAGAGCTAAAAGAGATCCATGCCTTTGAACAGAAGACGCTGACACCAGAACAGTGGGAGAAACAGAAAGCACAGTGATGAAGACACACACTGACCATATTTACTTGACAACTTATTATGTGTAAATAAGCAACACTTGCTCACACAATATTGACTTTCTGGCCTAACATATATTTAATTTCAGTCAATGATGACTGAAATTAAGTATTAAACATGATGACAAAACAATCCTGGTCTGAATTCCTTAATGATTGAATGAGTGTACTGAAACTTCACTTTCAGTTTTTGTTGTGGAGGTATGTGATTATTACTGACATTATACCAAATTGTTATTAGGAATGGAACAACGCATAACACGGAACAGGCAGAAAAACTAAAATGAAATCTTATCACTTAAATAAACCATTACTGCTTTTGTTCGGTCATAACAATGAATGACTTGACTCAAGGAAATGGCTTTTCAGATTGGAAAGCCCCAAATAAAGTTATTTATGTGAGATCAAGTGTGTAAATGAATAAAATGGGCTGGTACAGCTTTGAGAATTG
>TU904135
CATACATGGTAGTGGACCTTCCCTTTCGCTTCGTCATCTTGTTTAACAAAATAACCTACCGTAACGTTTTGGATCATAAAGCGACACCAAAAGTATGTCTGTTACAACAGATCACATCCGTGACAAACTAATCAAGGAGATCGGAGCGGTGCATGTGGAAGTTGAAGACACATCCCCTAACAGATGTGCTGCCAGCTTCAAAGTTCTAATAGTGTCTCCCCAGTTTGAGGGGAAACCACTGCTGGCGAGACACAGGATGGTGAACACCTGCTTGGCTGAAGAGCTAAAAGAGATCCATGCCTTTGAACAGAAGACGCTGACACCAGAACAGTGGGAGAAACAGAAAGCACAGTGATGAAGACACACACTGACCATATTTACTTGACAACTTATTATGTGTAAATAAGCAACACTTGCTCACACAATATTGACTTTCTGGCCTAACATATATTTAATTTCAGTCAATGATGACTGAAATTAAGTATTAAACATGATGACAAAACAATCCTGGTCTGAATTCCTTAATGATTGAATGAGTGTACTGAAACTTCACTTTCAGTTTTTGTTGTGGAGGTATGTGATTATTACTGACATTATACCAAATTGTTATTAGGAATGGAACAACGCATAACACGGAACAGGCAGAAAAACTAAAATGAAATCTTATCACTTAAATAAACCATTACTGCTTTTGTTCGGTCATAACAATGAATGACTTGACTCAAGGAAATGGCTTTTCAGATTGGAAAGCCCCAAATAAAGTTATTTATGTGAGATCAAGTGTGTAAATGAATAAAATGGGCTGGTACAGCTTTGAGAATTGATTATATGACTCGTCTGTTGTACAAAGCTCTCTTTCCAAGGACTAGATAGTGTGCATGTGCACTGATGTCTATTGAAGCTTCAGATAAAGCTAGACGC
>TU904136
CATACATGGTAGTGGACCTTCCCTTTCGCTTCGTCATCTTGTTTAACAAAATAACCTACCGTAACGTTTTGGATCATAAAGCGACACCAAAAGTATGTCTGTTACAACAGATCACATCCGTGACAAACTAATCAAGGAGATCGGAGCGGTGCATGTGGAAGTTGAAGACACATCCCCTAACAGATGTGCTGCCAGCTTCAAAGTTCTAATAGTGTCTCCCCAGTTTGAGGGGAAACCACTGCTGGCGAGACACAGGATGGTGAACACCTGCTTGGCTGAAGAGCTAAAAGAGATCCATGCCTTTGAACAGAAGACGCTGACACCAGAACAGTGGGAGAAACAGAAAGCACAGTGATGAAGACACACACTGACCATATTTACTTGACAACTTATTATGTGTAAATAAGCAACACTTGCTCACACAATATTGACTTTCTGGCCTAACATATATTTAATTTCAGTCAATGATGACTGAAATTAAGTATTAAACATGATGACAAAACAATCCTGGTCTGAATTCCTTAATGATTGAATGAGTGTACTGAAACTTCACTTTCAGTTTTTGTTGTGGAGGTATGTGATTATTACTGACATTATACCAAATTGTTATTAGGAATGGAACAACGCATAACACGGAACAGGCAGAAAAACTAAAATGAAATCTTATCACTTAAATAAACCATTACTGCTTTTGTTCGGTCATAACAATGAATGACTTGACTCAAGGAAATGGCTTTTCAGATTGGAAAGCCCCAAATAAAGTTATTTATGTGAGATCAAGTGTGTAAATGAATAAAATGGGCTGG
>TU904137
CATACATGGTAGTGGACCTTCCCTTTCGCTTCGTCATCTTGTTTAACAAAATAACCTACCGTAACGTTTTGGATCATAAAGCGACACCAAAAGTATGTCTGTTACAACAGATCACATCCGTGACAAACTAATCAAGGAGATCGGAGCGGTGCATGTGGAAGTTGAAGACACATCCCCTAACAGATGTGCTGCCAGCTTCAAAGTTCTAATAGTGTCTCCCCAGTTTGAGGGGAAACCACTGCTGGCGAGACACAGGATGGTGAACACCTGCTTGGCTGAAGAGCTAAAAGAGATCCATGCCTTTGAACAGAAGACGCTGACACCAGAACAGTGGGAGAAACAGAAAGCACAGTGATGAAGACACACACTGACCATATTTACTTGACAACTTATTATGTGTAAATAAGCAACACTTGCTCACACAATATTGACTTTCTGGCCTAACATATATTTAATTTCAGTCAATGATGACTGAAATTAAGTATTAAACATGATGACAAAACAATCC

Function

symbol description
bola2 Predicted to enable iron-sulfur cluster binding activity. Involved in [2Fe-2S] cluster assembly and protein maturation by iron-sulfur cluster transfer. Located in cytoplasm and nucleus.

NR:

description
BolA-like protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001160518.1 False 746 mRNA 0.38 3 32122759 32124753
TU904135 False 921 TUCP 0.39 3 32122682 32124851
TU904136 False 806 TUCP 0.39 3 32122682 32124736
TU904137 True 508 TUCP 0.42 3 32122682 32124438

Neighbor

gene id symbol gene type direction distance location
LOC110531922 LOC106577451 coding upstream 8460 32111792 ~ 32114299 (+)
LOC118965935 NA coding upstream 44036 32077618 ~ 32078723 (+)
LOC110531918 LOC106577443 coding upstream 95545 32002866 ~ 32027214 (+)
LOC110531917 LOC106608522 coding upstream 130363 31900060 ~ 31992396 (+)
LOC110531915 LOC106595846 coding upstream 365257 31753182 ~ 31757502 (+)
rpl34 rpl34 coding downstream 369737 32494490 ~ 32498602 (+)
ostc ostc coding downstream 395325 32520078 ~ 32539651 (+)
trnag-ucc-3 NA coding downstream 910192 33032239 ~ 33061120 (+)
trnag-ucc-4 NA coding downstream 910698 33035451 ~ 33035522 (+)
trnag-ucc-6 NA coding downstream 917839 33042592 ~ 33042663 (+)
G794318 NA non-coding upstream 82116 32040370 ~ 32040643 (+)
G794165 NA non-coding upstream 199799 31922734 ~ 31922960 (+)
G794157 NA non-coding upstream 209959 31912592 ~ 31912800 (+)
G794142 NA non-coding upstream 224700 31897844 ~ 31898059 (+)
G794141 NA non-coding upstream 225148 31897388 ~ 31897611 (+)
G794415 NA non-coding downstream 38803 32163556 ~ 32163962 (+)
G794417 NA non-coding downstream 42627 32167380 ~ 32167653 (+)
G794418 NA non-coding downstream 42951 32167704 ~ 32167973 (+)
G794419 NA non-coding downstream 43229 32167982 ~ 32168294 (+)
G794422 NA non-coding downstream 47090 32171843 ~ 32172042 (+)
G793757 LOC107579696 other upstream 525841 31595996 ~ 31596918 (+)
LOC110531891 NA other upstream 1834596 30282637 ~ 30288163 (+)
rbpjb LOC106577485 other upstream 2780556 29248127 ~ 29342203 (+)
taf6l taf6l other upstream 4635236 27480038 ~ 27487523 (+)
G794892 NA other downstream 377094 32501847 ~ 32502355 (+)
G794893 NA other downstream 377643 32502396 ~ 32502749 (+)
G794886 LOC106577459 other downstream 458853 32583606 ~ 32587388 (+)
G796495 LOC106613263 other downstream 1996669 34121422 ~ 34121740 (+)
G797056 NA other downstream 2431178 34555931 ~ 34556622 (+)

Expression


Co-expression Network