Gene
RNA
| Item | Value |
|---|---|
| gene id | ostc |
| gene name | ostc |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 32520078 ~ 32539651 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| ostc | Predicted to act upstream of or within protein glycosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of oligosaccharyltransferase complex. Is expressed in several structures, including axis; digestive system; hatching gland; notochord; and polster. Orthologous to human OSTC (oligosaccharyltransferase complex non-catalytic subunit). |
| description |
|---|
| PREDICTED: oligosaccharyltransferase complex subunit OSTC |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021615424.1 | True | 1232 | mRNA | 0.41 | 4 | 32520078 | 32539651 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rpl34 | rpl34 | coding | upstream | 21476 | 32494490 ~ 32498602 (+) |
| zgc:112271 | bola2 | coding | upstream | 395325 | 32122682 ~ 32124851 (+) |
| LOC110531922 | LOC106577451 | coding | upstream | 405779 | 32111792 ~ 32114299 (+) |
| LOC118965935 | NA | coding | upstream | 441355 | 32077618 ~ 32078723 (+) |
| LOC110531918 | LOC106577443 | coding | upstream | 492864 | 32002866 ~ 32027214 (+) |
| trnag-ucc-3 | NA | coding | downstream | 495294 | 33032239 ~ 33061120 (+) |
| trnag-ucc-4 | NA | coding | downstream | 495800 | 33035451 ~ 33035522 (+) |
| trnag-ucc-6 | NA | coding | downstream | 502941 | 33042592 ~ 33042663 (+) |
| trnag-ucc-7 | NA | coding | downstream | 504352 | 33044003 ~ 33044074 (+) |
| trnag-ucc-8 | NA | coding | downstream | 507160 | 33046811 ~ 33046882 (+) |
| G794894 | NA | non-coding | upstream | 16073 | 32503758 ~ 32504005 (+) |
| G794890 | NA | non-coding | upstream | 25832 | 32494034 ~ 32494246 (+) |
| G794871 | NA | non-coding | upstream | 39177 | 32480669 ~ 32480901 (+) |
| G794860 | NA | non-coding | upstream | 43755 | 32476120 ~ 32476323 (+) |
| G794853 | NA | non-coding | upstream | 51716 | 32467902 ~ 32468362 (+) |
| G794912 | NA | non-coding | downstream | 1516 | 32541167 ~ 32542273 (+) |
| G794884 | NA | non-coding | downstream | 21866 | 32561517 ~ 32562743 (+) |
| G794932 | NA | non-coding | downstream | 87907 | 32627558 ~ 32651727 (+) |
| G794998 | NA | non-coding | downstream | 180969 | 32720620 ~ 32720875 (+) |
| G794999 | NA | non-coding | downstream | 182848 | 32722499 ~ 32722823 (+) |
| G794893 | NA | other | upstream | 17329 | 32502396 ~ 32502749 (+) |
| G794892 | NA | other | upstream | 17723 | 32501847 ~ 32502355 (+) |
| LOC110531915 | LOC106595846 | other | upstream | 763633 | 31753182 ~ 31757502 (+) |
| G793757 | LOC107579696 | other | upstream | 923160 | 31595996 ~ 31596918 (+) |
| G794886 | LOC106577459 | other | downstream | 43955 | 32583606 ~ 32587388 (+) |
| G796495 | LOC106613263 | other | downstream | 1581771 | 34121422 ~ 34121740 (+) |
| G797056 | NA | other | downstream | 2016280 | 34555931 ~ 34556622 (+) |
| G797932 | pphln | other | downstream | 2825337 | 35364988 ~ 35372148 (+) |
| G799053 | NA | other | downstream | 3773478 | 36313129 ~ 36316805 (+) |
